RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 UBR2Q8IWV8 1755 aa13.95□□□□□ -0.18
SNRPA1-212ENST00000560496 BRCA1P38398 1863 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-212ENST00000560496 COL3A1P02461 1466 aaPredicted RBP13.94□□□□□ -0.18
SNRPA1-212ENST00000560496 LOC102724428A0A0B4J2F2 783 aa13.94□□□□□ -0.18
SNRPA1-212ENST00000560496 SIK1P57059 783 aa13.94□□□□□ -0.18
SNRPA1-212ENST00000560496 ITPK1Q13572 414 aa13.94□□□□□ -0.18
SNRPA1-212ENST00000560496 AK7Q96M32 723 aa13.94□□□□□ -0.18
SNRPA1-212ENST00000560496 TMOD3Q9NYL9 352 aa13.94□□□□□ -0.18
SNRPA1-212ENST00000560496 ASAP1Q9ULH1 1129 aa13.94□□□□□ -0.18
SNRPA1-212ENST00000560496 AMER1Q5JTC6 1135 aaPredicted RBP13.93□□□□□ -0.18
SNRPA1-212ENST00000560496 SMIM5Q71RC9 77 aa13.93□□□□□ -0.18
SNRPA1-212ENST00000560496 AEBP1Q8IUX7 1158 aa13.93□□□□□ -0.18
SNRPA1-212ENST00000560496 ZNF784Q8NCA9 323 aaPredicted RBP13.93□□□□□ -0.18
SNRPA1-212ENST00000560496 SIPA1L3O60292 1781 aaPredicted RBP13.92□□□□□ -0.18
SNRPA1-212ENST00000560496 N4BP2Q86UW6 1770 aaPredicted RBP13.92□□□□□ -0.18
SNRPA1-212ENST00000560496 FLAD1Q8NFF5 587 aa13.92□□□□□ -0.18
SNRPA1-212ENST00000560496 ATG3Q9NT62 314 aa13.92□□□□□ -0.18
SNRPA1-212ENST00000560496 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.91□□□□□ -0.18
SNRPA1-212ENST00000560496 PHF14O94880 888 aa13.91□□□□□ -0.18
SNRPA1-212ENST00000560496 SSFA2P28290 1259 aa13.91□□□□□ -0.18
SNRPA1-212ENST00000560496 MORC1Q86VD1 984 aa13.91□□□□□ -0.18
SNRPA1-212ENST00000560496 SLC4A9Q96Q91 983 aa13.91□□□□□ -0.18
SNRPA1-212ENST00000560496 YBX3P16989 372 aaKnown RBP eCLIP13.9□□□□□ -0.18
SNRPA1-212ENST00000560496 ZNF530Q6P9A1 599 aaPredicted RBP13.9□□□□□ -0.18
SNRPA1-212ENST00000560496 KCPQ6ZWJ8 1503 aa13.9□□□□□ -0.19
SNRPA1-212ENST00000560496 HMGB2P26583 209 aaKnown RBP13.89□□□□□ -0.19
SNRPA1-212ENST00000560496 IL13P35225 146 aa13.89□□□□□ -0.19
SNRPA1-212ENST00000560496 GPR162Q16538 588 aa13.89□□□□□ -0.19
SNRPA1-212ENST00000560496 DCAF5Q96JK2 942 aa13.89□□□□□ -0.19
SNRPA1-212ENST00000560496 KNSTRNQ9Y448 316 aa13.89□□□□□ -0.19
SNRPA1-212ENST00000560496 ERVV-2B6SEH9 535 aa13.88□□□□□ -0.19
SNRPA1-212ENST00000560496 GNPATO15228 680 aa13.88□□□□□ -0.19
SNRPA1-212ENST00000560496 ATP6V1AP38606 617 aa13.88□□□□□ -0.19
SNRPA1-212ENST00000560496 C10orf71Q711Q0 1435 aa13.88□□□□□ -0.19
SNRPA1-212ENST00000560496 PXDNLA1KZ92 1463 aa13.87□□□□□ -0.19
SNRPA1-212ENST00000560496 HSP90AB1P08238 724 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-212ENST00000560496 AMOTQ4VCS5 1084 aa13.87□□□□□ -0.19
SNRPA1-212ENST00000560496 PLEKHO1Q53GL0 409 aaPredicted RBP13.87□□□□□ -0.19
SNRPA1-212ENST00000560496 PELP1Q8IZL8 1130 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-212ENST00000560496 CD2APQ9Y5K6 639 aa13.87□□□□□ -0.19
SNRPA1-212ENST00000560496 CNTNAP4Q9C0A0 1308 aa13.87□□□□□ -0.19
SNRPA1-212ENST00000560496 ADCY9O60503 1353 aa13.86□□□□□ -0.19
SNRPA1-212ENST00000560496 PER1O15534 1290 aaPredicted RBP13.86□□□□□ -0.19
SNRPA1-212ENST00000560496 SULT6B1Q6IMI4 303 aa13.86□□□□□ -0.19
SNRPA1-212ENST00000560496 ARFGEF1Q9Y6D6 1849 aa13.85□□□□□ -0.19
SNRPA1-212ENST00000560496 SCN7AQ01118 1682 aa13.85□□□□□ -0.19
SNRPA1-212ENST00000560496 NPC1L1Q9UHC9 1359 aa13.85□□□□□ -0.19
SNRPA1-212ENST00000560496 NRXN2Q9P2S2 1712 aa13.84□□□□□ -0.19
SNRPA1-212ENST00000560496 DLEC1Q9Y238 1755 aa13.84□□□□□ -0.19
SNRPA1-212ENST00000560496 CEP350Q5VT06 3117 aa13.84□□□□□ -0.19
SNRPA1-212ENST00000560496 AFDNP55196 1824 aaKnown RBP13.83□□□□□ -0.2
SNRPA1-212ENST00000560496 MTHFSP49914 203 aa13.83□□□□□ -0.2
SNRPA1-212ENST00000560496 C1orf141Q5JVX7 400 aa13.83□□□□□ -0.2
SNRPA1-212ENST00000560496 RBM42Q9BTD8 480 aaKnown RBP13.83□□□□□ -0.2
SNRPA1-212ENST00000560496 CABP4P57796 275 aa13.82□□□□□ -0.2
SNRPA1-212ENST00000560496 RC3H1Q5TC82 1133 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-212ENST00000560496 ATP10DQ9P241 1426 aa13.81□□□□□ -0.2
SNRPA1-212ENST00000560496 GRIN3BO60391 1043 aa13.81□□□□□ -0.2
SNRPA1-212ENST00000560496 AKAP4Q5JQC9 854 aa13.81□□□□□ -0.2
SNRPA1-212ENST00000560496 RTCBQ9Y3I0 505 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-212ENST00000560496 BCORQ6W2J9 1755 aa13.81□□□□□ -0.2
SNRPA1-212ENST00000560496 MMP10P09238 476 aa13.8□□□□□ -0.2
SNRPA1-212ENST00000560496 HMOX1P09601 288 aa13.8□□□□□ -0.2
SNRPA1-212ENST00000560496 GYS1P13807 737 aa13.8□□□□□ -0.2
SNRPA1-212ENST00000560496 CC2D1BQ5T0F9 858 aaKnown RBP13.8□□□□□ -0.2
SNRPA1-212ENST00000560496 NFATC2IPQ8NCF5 419 aa13.8□□□□□ -0.2
SNRPA1-212ENST00000560496 PTCD1O75127 700 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-212ENST00000560496 RPS6KA4O75676 772 aa13.79□□□□□ -0.2
SNRPA1-212ENST00000560496 CRKLP46109 303 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-212ENST00000560496 ARHGEF1Q92888 912 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-212ENST00000560496 SLC52A2Q9HAB3 445 aa13.79□□□□□ -0.2
SNRPA1-212ENST00000560496 WWC3Q9ULE0 1092 aa13.78□□□□□ -0.2
SNRPA1-212ENST00000560496 USP42Q9H9J4 1324 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-212ENST00000560496 RNMTO43148 476 aaKnown RBP13.77□□□□□ -0.21
SNRPA1-212ENST00000560496 DIAPH1O60610 1272 aaKnown RBP13.77□□□□□ -0.21
SNRPA1-212ENST00000560496 C1QTNF8P60827 252 aa13.77□□□□□ -0.21
SNRPA1-212ENST00000560496 MTHFSDQ2M296 383 aaKnown RBP13.77□□□□□ -0.21
SNRPA1-212ENST00000560496 TRAPPC3LQ5T215 181 aa13.77□□□□□ -0.21
SNRPA1-212ENST00000560496 RNF39Q9H2S5 420 aa13.77□□□□□ -0.21
SNRPA1-212ENST00000560496 LGR6Q9HBX8 967 aa13.77□□□□□ -0.21
SNRPA1-212ENST00000560496 COL11A2P13942 1736 aaPredicted RBP13.76□□□□□ -0.21
SNRPA1-212ENST00000560496 ANKRD31Q8N7Z5 1873 aa13.76□□□□□ -0.21
SNRPA1-212ENST00000560496 LAMB4A4D0S4 1761 aa13.76□□□□□ -0.21
SNRPA1-212ENST00000560496 COL15A1P39059 1388 aa13.75□□□□□ -0.21
SNRPA1-212ENST00000560496 SOS1Q07889 1333 aaPredicted RBP13.75□□□□□ -0.21
SNRPA1-212ENST00000560496 DLG5Q8TDM6 1919 aa13.75□□□□□ -0.21
SNRPA1-212ENST00000560496 GIGYF1O75420 1035 aaPredicted RBP13.75□□□□□ -0.21
SNRPA1-212ENST00000560496 INTS5Q6P9B9 1019 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-212ENST00000560496 SRP68Q9UHB9 627 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-212ENST00000560496 RFC4P35249 363 aa13.74□□□□□ -0.21
SNRPA1-212ENST00000560496 SLC39A6Q13433 755 aa13.74□□□□□ -0.21
SNRPA1-212ENST00000560496 DNAJC10Q8IXB1 793 aa13.74□□□□□ -0.21
SNRPA1-212ENST00000560496 NLGN1Q8N2Q7 840 aa13.74□□□□□ -0.21
SNRPA1-212ENST00000560496 TIAM2Q8IVF5 1701 aa13.73□□□□□ -0.21
SNRPA1-212ENST00000560496 DDR1Q08345 913 aa13.73□□□□□ -0.21
SNRPA1-212ENST00000560496 SBF1O95248 1867 aa13.73□□□□□ -0.21
SNRPA1-212ENST00000560496 CEMIPQ8WUJ3 1361 aa13.72□□□□□ -0.21
SNRPA1-212ENST00000560496 CYP19A1P11511 503 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-212ENST00000560496 HOXD11P31277 338 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-212ENST00000560496 TGFB2P61812 414 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms