RNA–Protein interactions for RNA: ENST00000560054.5

AC104041.1-201, humanhuman

TSL 5 BASIC

Gene AC104041.1, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104041.1-201ENST00000560054 DIAPH1O60610 1272 aaKnown RBP13.18□□□□□ -0.3
AC104041.1-201ENST00000560054 CNGB1Q14028 1251 aaPredicted RBP13.18□□□□□ -0.3
AC104041.1-201ENST00000560054 C1orf141Q5JVX7 400 aa13.18□□□□□ -0.3
AC104041.1-201ENST00000560054 KDM6AO15550 1401 aaPredicted RBP13.18□□□□□ -0.3
AC104041.1-201ENST00000560054 C5P01031 1676 aa13.18□□□□□ -0.3
AC104041.1-201ENST00000560054 HMOX1P09601 288 aa13.17□□□□□ -0.3
AC104041.1-201ENST00000560054 POLD1P28340 1107 aa13.17□□□□□ -0.3
AC104041.1-201ENST00000560054 CABP4P57796 275 aa13.17□□□□□ -0.3
AC104041.1-201ENST00000560054 ITPK1Q13572 414 aa13.17□□□□□ -0.3
AC104041.1-201ENST00000560054 AMIGO3Q86WK7 504 aa13.17□□□□□ -0.3
AC104041.1-201ENST00000560054 LINC00116Q8NCU8 138 aa13.17□□□□□ -0.3
AC104041.1-201ENST00000560054 FLAD1Q8NFF5 587 aa13.17□□□□□ -0.3
AC104041.1-201ENST00000560054 MAP3K5Q99683 1374 aa13.17□□□□□ -0.3
AC104041.1-201ENST00000560054 ATP6V1AP38606 617 aa13.16□□□□□ -0.3
AC104041.1-201ENST00000560054 AK7Q96M32 723 aa13.16□□□□□ -0.3
AC104041.1-201ENST00000560054 C4BP0C0L5 1744 aa13.16□□□□□ -0.3
AC104041.1-201ENST00000560054 COL24A1Q17RW2 1714 aa13.16□□□□□ -0.3
AC104041.1-201ENST00000560054 TAF1LQ8IZX4 1826 aa13.16□□□□□ -0.3
AC104041.1-201ENST00000560054 AKAP4Q5JQC9 854 aa13.15□□□□□ -0.3
AC104041.1-201ENST00000560054 SMIM5Q71RC9 77 aa13.15□□□□□ -0.3
AC104041.1-201ENST00000560054 NFATC2IPQ8NCF5 419 aa13.15□□□□□ -0.3
AC104041.1-201ENST00000560054 SLC4A9Q96Q91 983 aa13.15□□□□□ -0.3
AC104041.1-201ENST00000560054 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.14□□□□□ -0.31
AC104041.1-201ENST00000560054 MSL1Q68DK7 614 aa13.14□□□□□ -0.31
AC104041.1-201ENST00000560054 COL3A1P02461 1466 aaPredicted RBP13.14□□□□□ -0.31
AC104041.1-201ENST00000560054 PHF14O94880 888 aa13.13□□□□□ -0.31
AC104041.1-201ENST00000560054 SSFA2P28290 1259 aa13.13□□□□□ -0.31
AC104041.1-201ENST00000560054 CACNB1Q02641 598 aaPredicted RBP13.13□□□□□ -0.31
AC104041.1-201ENST00000560054 MTHFSDQ2M296 383 aaKnown RBP13.13□□□□□ -0.31
AC104041.1-201ENST00000560054 RBM42Q9BTD8 480 aaKnown RBP13.13□□□□□ -0.31
AC104041.1-201ENST00000560054 GNPATO15228 680 aa13.12□□□□□ -0.31
AC104041.1-201ENST00000560054 KLHL34Q8N239 644 aa13.12□□□□□ -0.31
AC104041.1-201ENST00000560054 LGR6Q9HBX8 967 aa13.12□□□□□ -0.31
AC104041.1-201ENST00000560054 U2SURPO15042 1029 aaKnown RBP13.11□□□□□ -0.31
AC104041.1-201ENST00000560054 RNMTO43148 476 aaKnown RBP13.11□□□□□ -0.31
AC104041.1-201ENST00000560054 PTCD1O75127 700 aaKnown RBP13.1□□□□□ -0.31
AC104041.1-201ENST00000560054 YY1P25490 414 aa13.1□□□□□ -0.31
AC104041.1-201ENST00000560054 PPP2R1AP30153 589 aa13.1□□□□□ -0.31
AC104041.1-201ENST00000560054 RC3H1Q5TC82 1133 aaKnown RBP13.1□□□□□ -0.31
AC104041.1-201ENST00000560054 CFAP53Q96M91 514 aa13.1□□□□□ -0.31
AC104041.1-201ENST00000560054 SLC52A2Q9HAB3 445 aa13.1□□□□□ -0.31
AC104041.1-201ENST00000560054 UBR3Q6ZT12 1888 aa13.1□□□□□ -0.31
AC104041.1-201ENST00000560054 ZNF831Q5JPB2 1677 aa13.09□□□□□ -0.31
AC104041.1-201ENST00000560054 NLGN2Q8NFZ4 835 aa13.09□□□□□ -0.31
AC104041.1-201ENST00000560054 RTCBQ9Y3I0 505 aaKnown RBP13.09□□□□□ -0.31
AC104041.1-201ENST00000560054 CNTNAP4Q9C0A0 1308 aa13.09□□□□□ -0.31
AC104041.1-201ENST00000560054 SCN11AQ9UI33 1791 aa13.08□□□□□ -0.32
AC104041.1-201ENST00000560054 TRAPPC3LQ5T215 181 aa13.08□□□□□ -0.32
AC104041.1-201ENST00000560054 RPS6KA4O75676 772 aa13.07□□□□□ -0.32
AC104041.1-201ENST00000560054 GPR162Q16538 588 aa13.07□□□□□ -0.32
AC104041.1-201ENST00000560054 CD2APQ9Y5K6 639 aa13.07□□□□□ -0.32
AC104041.1-201ENST00000560054 MRC1P22897 1456 aa13.07□□□□□ -0.32
AC104041.1-201ENST00000560054 SLC39A6Q13433 755 aa13.06□□□□□ -0.32
AC104041.1-201ENST00000560054 GAS2L2Q8NHY3 880 aa13.06□□□□□ -0.32
AC104041.1-201ENST00000560054 ARHGEF1Q92888 912 aaKnown RBP13.06□□□□□ -0.32
AC104041.1-201ENST00000560054 PHACTR3Q96KR7 559 aa13.06□□□□□ -0.32
AC104041.1-201ENST00000560054 RSPH6AQ9H0K4 717 aa13.06□□□□□ -0.32
AC104041.1-201ENST00000560054 NUDCQ9Y266 331 aa13.06□□□□□ -0.32
AC104041.1-201ENST00000560054 GNAT3A8MTJ3 354 aa13.05□□□□□ -0.32
AC104041.1-201ENST00000560054 PRKAR2BP31323 418 aa13.05□□□□□ -0.32
AC104041.1-201ENST00000560054 CRKLP46109 303 aaKnown RBP13.05□□□□□ -0.32
AC104041.1-201ENST00000560054 IL17REQ8NFR9 667 aa13.05□□□□□ -0.32
AC104041.1-201ENST00000560054 ADAMTS7Q9UKP4 1686 aa13.05□□□□□ -0.32
AC104041.1-201ENST00000560054 COL5A3P25940 1745 aaPredicted RBP13.05□□□□□ -0.32
AC104041.1-201ENST00000560054 U2AF1L5P0DN76 240 aaPredicted RBP13.04□□□□□ -0.32
AC104041.1-201ENST00000560054 RFC4P35249 363 aa13.04□□□□□ -0.32
AC104041.1-201ENST00000560054 U2AF1Q01081 240 aaKnown RBP eCLIP13.04□□□□□ -0.32
AC104041.1-201ENST00000560054 INTS5Q6P9B9 1019 aaKnown RBP13.04□□□□□ -0.32
AC104041.1-201ENST00000560054 DNAJC10Q8IXB1 793 aa13.04□□□□□ -0.32
AC104041.1-201ENST00000560054 MMP10P09238 476 aa13.03□□□□□ -0.32
AC104041.1-201ENST00000560054 GYS1P13807 737 aa13.03□□□□□ -0.32
AC104041.1-201ENST00000560054 PELP1Q8IZL8 1130 aaKnown RBP13.03□□□□□ -0.32
AC104041.1-201ENST00000560054 NLGN1Q8N2Q7 840 aa13.03□□□□□ -0.32
AC104041.1-201ENST00000560054 MYH14Q7Z406 1995 aaKnown RBP13.02□□□□□ -0.32
AC104041.1-201ENST00000560054 FCHSD2O94868 740 aa13.02□□□□□ -0.33
AC104041.1-201ENST00000560054 CYP19A1P11511 503 aaPredicted RBP13.02□□□□□ -0.33
AC104041.1-201ENST00000560054 YBX3P16989 372 aaKnown RBP eCLIP13.02□□□□□ -0.33
AC104041.1-201ENST00000560054 KCPQ6ZWJ8 1503 aa13.02□□□□□ -0.33
AC104041.1-201ENST00000560054 CICQ96RK0 1608 aaPredicted RBP13.02□□□□□ -0.33
AC104041.1-201ENST00000560054 TJP1Q07157 1748 aa13.02□□□□□ -0.33
AC104041.1-201ENST00000560054 C1QBPQ07021 282 aaKnown RBP13.01□□□□□ -0.33
AC104041.1-201ENST00000560054 TEFQ10587 303 aa13.01□□□□□ -0.33
AC104041.1-201ENST00000560054 VSIG10Q8N0Z9 540 aa13.01□□□□□ -0.33
AC104041.1-201ENST00000560054 CCDC87Q9NVE4 849 aa13.01□□□□□ -0.33
AC104041.1-201ENST00000560054 CEMIPQ8WUJ3 1361 aa13.01□□□□□ -0.33
AC104041.1-201ENST00000560054 USP42Q9H9J4 1324 aaKnown RBP13□□□□□ -0.33
AC104041.1-201ENST00000560054 GRIN3BO60391 1043 aa13□□□□□ -0.33
AC104041.1-201ENST00000560054 SRP68Q9UHB9 627 aaKnown RBP13□□□□□ -0.33
AC104041.1-201ENST00000560054 SOS1Q07889 1333 aaPredicted RBP12.99□□□□□ -0.33
AC104041.1-201ENST00000560054 ZNF790Q6PG37 636 aa12.99□□□□□ -0.33
AC104041.1-201ENST00000560054 TTC5Q8N0Z6 440 aa12.99□□□□□ -0.33
AC104041.1-201ENST00000560054 ZNF496Q96IT1 587 aaPredicted RBP12.99□□□□□ -0.33
AC104041.1-201ENST00000560054 VIRMAQ69YN4 1812 aaKnown RBP12.98□□□□□ -0.33
AC104041.1-201ENST00000560054 FKBP8Q14318 412 aa12.98□□□□□ -0.33
AC104041.1-201ENST00000560054 ZNF784Q8NCA9 323 aaPredicted RBP12.98□□□□□ -0.33
AC104041.1-201ENST00000560054 STARD3NLO95772 234 aa12.97□□□□□ -0.33
AC104041.1-201ENST00000560054 DDX10Q13206 875 aaKnown RBP12.97□□□□□ -0.33
AC104041.1-201ENST00000560054 MCM10Q7L590 875 aa12.97□□□□□ -0.33
AC104041.1-201ENST00000560054 ZBTB1Q9Y2K1 713 aa12.97□□□□□ -0.33
AC104041.1-201ENST00000560054 PARP3Q9Y6F1 533 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms