RNA–Protein interactions for RNA: ENST00000559828.1

PRC1-216, Transcript of protein regulator of cytokinesis 1, humanhuman

TSL 3

Gene PRC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRC1-216ENST00000559828 LGR6Q9HBX8 967 aa12.8□□□□□ -0.36
PRC1-216ENST00000559828 ZNF521Q96K83 1311 aa12.8□□□□□ -0.36
PRC1-216ENST00000559828 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
PRC1-216ENST00000559828 CFAP44Q96MT7 982 aa12.79□□□□□ -0.36
PRC1-216ENST00000559828 SBF2Q86WG5 1849 aa12.78□□□□□ -0.36
PRC1-216ENST00000559828 PLSCR1O15162 318 aa12.78□□□□□ -0.36
PRC1-216ENST00000559828 ZNF853P0CG23 659 aa12.78□□□□□ -0.36
PRC1-216ENST00000559828 GNAI1P63096 354 aa12.78□□□□□ -0.36
PRC1-216ENST00000559828 NEUROD2Q15784 382 aa12.78□□□□□ -0.36
PRC1-216ENST00000559828 NFATC2IPQ8NCF5 419 aa12.78□□□□□ -0.36
PRC1-216ENST00000559828 SMARCC1Q92922 1105 aaPredicted RBP12.78□□□□□ -0.36
PRC1-216ENST00000559828 CHMP4AQ9BY43 222 aa12.78□□□□□ -0.36
PRC1-216ENST00000559828 IFT57Q9NWB7 429 aa12.78□□□□□ -0.36
PRC1-216ENST00000559828 TMOD3Q9NYL9 352 aa12.78□□□□□ -0.36
PRC1-216ENST00000559828 VIRMAQ69YN4 1812 aaKnown RBP12.78□□□□□ -0.36
PRC1-216ENST00000559828 CHL1O00533 1208 aa12.77□□□□□ -0.37
PRC1-216ENST00000559828 PRIM1P49642 420 aaKnown RBP12.77□□□□□ -0.37
PRC1-216ENST00000559828 SAMD1Q6SPF0 538 aaPredicted RBP12.77□□□□□ -0.37
PRC1-216ENST00000559828 SOS1Q07889 1333 aaPredicted RBP12.77□□□□□ -0.37
PRC1-216ENST00000559828 ZBED9Q6R2W3 1325 aa12.77□□□□□ -0.37
PRC1-216ENST00000559828 NHSQ6T4R5 1651 aa12.77□□□□□ -0.37
PRC1-216ENST00000559828 GOLGA2Q08379 1002 aa12.76□□□□□ -0.37
PRC1-216ENST00000559828 MCM10Q7L590 875 aa12.76□□□□□ -0.37
PRC1-216ENST00000559828 VSIG10Q8N0Z9 540 aa12.76□□□□□ -0.37
PRC1-216ENST00000559828 PIGBQ92521 554 aa12.76□□□□□ -0.37
PRC1-216ENST00000559828 RRP7AQ9Y3A4 280 aaKnown RBP12.76□□□□□ -0.37
PRC1-216ENST00000559828 SIPA1L3O60292 1781 aaPredicted RBP12.76□□□□□ -0.37
PRC1-216ENST00000559828 ITGB4P16144 1822 aa12.76□□□□□ -0.37
PRC1-216ENST00000559828 BTBD11A6QL63 1104 aa12.75□□□□□ -0.37
PRC1-216ENST00000559828 E9PSI1 815 aa12.75□□□□□ -0.37
PRC1-216ENST00000559828 HNRNPUQ00839 825 aaKnown RBP eCLIP12.75□□□□□ -0.37
PRC1-216ENST00000559828 KAT6BQ8WYB5 2073 aa12.75□□□□□ -0.37
PRC1-216ENST00000559828 ZNF790Q6PG37 636 aa12.74□□□□□ -0.37
PRC1-216ENST00000559828 TRMT2AQ8IZ69 625 aaKnown RBP12.74□□□□□ -0.37
PRC1-216ENST00000559828 TEX13AQ9BXU3 409 aaPredicted RBP12.74□□□□□ -0.37
PRC1-216ENST00000559828 MYH16Q9H6N6 1097 aa12.74□□□□□ -0.37
PRC1-216ENST00000559828 TOGARAM1Q9Y4F4 1720 aa12.74□□□□□ -0.37
PRC1-216ENST00000559828 ZNF831Q5JPB2 1677 aa12.73□□□□□ -0.37
PRC1-216ENST00000559828 DCTN1Q14203 1278 aa12.73□□□□□ -0.37
PRC1-216ENST00000559828 DOT1LQ8TEK3 1739 aa12.73□□□□□ -0.37
PRC1-216ENST00000559828 HEG1Q9ULI3 1381 aa12.72□□□□□ -0.37
PRC1-216ENST00000559828 KCNQ2O43526 872 aa12.72□□□□□ -0.37
PRC1-216ENST00000559828 HOXB7P09629 217 aa12.72□□□□□ -0.37
PRC1-216ENST00000559828 CT47B1P0C2W7 299 aaPredicted RBP12.72□□□□□ -0.37
PRC1-216ENST00000559828 SLFN5Q08AF3 891 aa12.72□□□□□ -0.37
PRC1-216ENST00000559828 SLC27A3Q5K4L6 730 aa12.72□□□□□ -0.37
PRC1-216ENST00000559828 TTC5Q8N0Z6 440 aa12.72□□□□□ -0.37
PRC1-216ENST00000559828 ATG3Q9NT62 314 aa12.72□□□□□ -0.37
PRC1-216ENST00000559828 RGPD3A6NKT7 1758 aaPredicted RBP12.71□□□□□ -0.37
PRC1-216ENST00000559828 RGPD4Q7Z3J3 1758 aa12.71□□□□□ -0.37
PRC1-216ENST00000559828 TRIM37O94972 964 aa12.71□□□□□ -0.37
PRC1-216ENST00000559828 SF3B2Q13435 895 aaKnown RBP12.71□□□□□ -0.37
PRC1-216ENST00000559828 FAM182BQ5T319 152 aa12.71□□□□□ -0.37
PRC1-216ENST00000559828 ZNF428Q96B54 188 aa12.71□□□□□ -0.37
PRC1-216ENST00000559828 SYTL4Q96C24 671 aaPredicted RBP12.71□□□□□ -0.37
PRC1-216ENST00000559828 ACSBG1Q96GR2 724 aa12.71□□□□□ -0.37
PRC1-216ENST00000559828 FMNL2Q96PY5 1086 aa12.71□□□□□ -0.37
PRC1-216ENST00000559828 TSPYL4Q9UJ04 414 aa12.71□□□□□ -0.37
PRC1-216ENST00000559828 U3KPZ7 1027 aaPredicted RBP12.71□□□□□ -0.37
PRC1-216ENST00000559828 PAPPAQ13219 1627 aa12.7□□□□□ -0.38
PRC1-216ENST00000559828 EIF4A1P60842 406 aaKnown RBP12.7□□□□□ -0.38
PRC1-216ENST00000559828 BTAF1O14981 1849 aa12.69□□□□□ -0.38
PRC1-216ENST00000559828 KDM3BQ7LBC6 1761 aa12.69□□□□□ -0.38
PRC1-216ENST00000559828 BAG6P46379 1132 aa12.69□□□□□ -0.38
PRC1-216ENST00000559828 THUMPD2Q9BTF0 503 aaKnown RBP12.69□□□□□ -0.38
PRC1-216ENST00000559828 MBIPQ9NS73 344 aa12.69□□□□□ -0.38
PRC1-216ENST00000559828 ASAP1Q9ULH1 1129 aa12.69□□□□□ -0.38
PRC1-216ENST00000559828 CICQ96RK0 1608 aaPredicted RBP12.69□□□□□ -0.38
PRC1-216ENST00000559828 UBR2Q8IWV8 1755 aa12.69□□□□□ -0.38
PRC1-216ENST00000559828 APBA3O96018 575 aa12.68□□□□□ -0.38
PRC1-216ENST00000559828 SNRPA1P09661 255 aaKnown RBP12.68□□□□□ -0.38
PRC1-216ENST00000559828 SALL2Q9Y467 1007 aaPredicted RBP12.68□□□□□ -0.38
PRC1-216ENST00000559828 LY75O60449 1722 aa12.68□□□□□ -0.38
PRC1-216ENST00000559828 PALLDQ8WX93 1383 aa12.68□□□□□ -0.38
PRC1-216ENST00000559828 LOC102724428A0A0B4J2F2 783 aa12.67□□□□□ -0.38
PRC1-216ENST00000559828 GIGYF1O75420 1035 aaPredicted RBP12.67□□□□□ -0.38
PRC1-216ENST00000559828 SIK1P57059 783 aa12.67□□□□□ -0.38
PRC1-216ENST00000559828 UPF1Q92900 1129 aaKnown RBP eCLIP12.67□□□□□ -0.38
PRC1-216ENST00000559828 TNS1Q9HBL0 1735 aaKnown RBP12.66□□□□□ -0.38
PRC1-216ENST00000559828 STARD3NLO95772 234 aa12.66□□□□□ -0.38
PRC1-216ENST00000559828 RC3H1Q5TC82 1133 aaKnown RBP12.66□□□□□ -0.38
PRC1-216ENST00000559828 DUSP27Q5VZP5 1158 aa12.66□□□□□ -0.38
PRC1-216ENST00000559828 ZNF496Q96IT1 587 aaPredicted RBP12.66□□□□□ -0.38
PRC1-216ENST00000559828 CAMKK2Q96RR4 588 aa12.66□□□□□ -0.38
PRC1-216ENST00000559828 KCPQ6ZWJ8 1503 aa12.66□□□□□ -0.38
PRC1-216ENST00000559828 ERBB4Q15303 1308 aa12.65□□□□□ -0.38
PRC1-216ENST00000559828 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
PRC1-216ENST00000559828 ILDR2Q71H61 639 aa12.65□□□□□ -0.38
PRC1-216ENST00000559828 LAS1LQ9Y4W2 734 aaKnown RBP12.65□□□□□ -0.38
PRC1-216ENST00000559828 FANCIQ9NVI1 1328 aa12.64□□□□□ -0.39
PRC1-216ENST00000559828 DCAF8L1A6NGE4 600 aa12.64□□□□□ -0.39
PRC1-216ENST00000559828 TXNRD1Q16881 649 aa12.64□□□□□ -0.39
PRC1-216ENST00000559828 PTF1AQ7RTS3 328 aa12.64□□□□□ -0.39
PRC1-216ENST00000559828 SPINK5Q9NQ38 1064 aaPredicted RBP12.64□□□□□ -0.39
PRC1-216ENST00000559828 MIS18AQ9NYP9 233 aa12.64□□□□□ -0.39
PRC1-216ENST00000559828 ATP6V1AP38606 617 aa12.63□□□□□ -0.39
PRC1-216ENST00000559828 PROM2Q8N271 834 aa12.63□□□□□ -0.39
PRC1-216ENST00000559828 RBM42Q9BTD8 480 aaKnown RBP12.63□□□□□ -0.39
PRC1-216ENST00000559828 CCNL1Q9UK58 526 aaPredicted RBP12.63□□□□□ -0.39
PRC1-216ENST00000559828 CACNA1FO60840 1977 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms