RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 SPC24Q8NBT2 197 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 SH3GL3Q99963 347 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ANTXR1Q9H6X2 564 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ZNF521Q96K83 1311 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 CFAP74Q9C0B2 1584 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 TARBP1Q13395 1621 aaKnown RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 WDR7Q9Y4E6 1490 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 PLIN1O60240 522 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ZRANB2O95218 330 aaKnown RBP eCLIP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 SLFNL1Q499Z3 407 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 MCTP2Q6DN12 878 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 GBP6Q6ZN66 633 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 DHX37Q8IY37 1157 aaKnown RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 EFCAB13Q8IY85 973 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 CTCFLQ8NI51 663 aaPredicted RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 RSRC1Q96IZ7 334 aaKnown RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 API5Q9BZZ5 524 aaKnown RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 SPATS2LQ9NUQ6 558 aaKnown RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 DONSONQ9NYP3 566 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 SPAG9O60271 1321 aaKnown RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ASXL2Q76L83 1435 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 TRPM2O94759 1503 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 PREX2Q70Z35 1606 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 PSMD7P51665 324 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 SLMAPQ14BN4 828 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 SH2D4BQ5SQS7 431 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 KLHL10Q6JEL2 608 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 TBC1D22AQ8WUA7 517 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 PIBF1Q8WXW3 757 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ANAPC4Q9UJX5 808 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ADAMTS8Q9UP79 889 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 IQGAP1P46940 1657 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 SBNO2Q9Y2G9 1366 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 PPFIA3O75145 1194 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 GSDMDP57764 484 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 IFFO1Q0D2I5 559 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 WWC2Q6AWC2 1192 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ITPRIPQ8IWB1 547 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 RNF168Q8IYW5 571 aaPredicted RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 RGS22Q8NE09 1264 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ERO1AQ96HE7 468 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 NUCKS1Q9H1E3 243 aaKnown RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 IFT57Q9NWB7 429 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ITGB1BP2Q9UKP3 347 aa2.81□□□□□ -1.96
RGPD1-204ENST00000559485 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.81□□□□□ -1.96
RGPD1-204ENST00000559485 PPP1R12AO14974 1030 aaPredicted RBP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 LUC7L3O95232 432 aaKnown RBP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 EZRP15311 586 aaKnown RBP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 HNRNPMP52272 730 aaKnown RBP eCLIP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 IRX5P78411 483 aaPredicted RBP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 NOLC1Q14978 699 aaKnown RBP eCLIP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 TNPO1Q92973 898 aaKnown RBP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 CCDC34Q96HJ3 373 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 MED4Q9NPJ6 270 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 PRG4Q92954 1404 aaPredicted RBP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 CBFA2T2O43439 604 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 ZNF592Q92610 1267 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 ARHGAP45Q92619 1136 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 RAD50Q92878 1312 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 ANKRD36BQ8N2N9 1353 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 ZFYVE9O95405 1425 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 SAMD9LQ8IVG5 1584 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 ABCA9Q8IUA7 1624 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 CDC42BPAQ5VT25 1732 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 ARHGAP5Q13017 1502 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 A2MP01023 1474 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 ELP1O95163 1332 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 RPGRIP1LQ68CZ1 1315 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 WDR33Q9C0J8 1336 aaKnown RBP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 FYB1O15117 783 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 SMC2O95347 1197 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 NBPF7P0C2Y1 421 aaPredicted RBP2.8□□□□□ -1.96
RGPD1-204ENST00000559485 CCDC192P0DO97 292 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 NLRP5P59047 1200 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 MUM1L1Q5H9M0 696 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 CCDC183Q5T5S1 534 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 CDCA7LQ96GN5 454 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 RUFY1Q96T51 708 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 MAGI2Q86UL8 1455 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 RTEL1-TNFRSF6BF6WH68 1400 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 SSH2Q76I76 1423 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 ARHGAP25P42331 645 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 B4GALNT4Q76KP1 1039 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 PLCD3Q8N3E9 789 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 KIF18AQ8NI77 898 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 TCP11Q8WWU5 503 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 TCHPQ9BT92 498 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 COG6Q9Y2V7 657 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 SPHKAPQ2M3C7 1700 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 MYO5CQ9NQX4 1742 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 MADDQ8WXG6 1647 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 SETBP1Q9Y6X0 1596 aa2.8□□□□□ -1.96
RGPD1-204ENST00000559485 TRAPPC8Q9Y2L5 1435 aa2.79□□□□□ -1.96
RGPD1-204ENST00000559485 ERICH4A6NGS2 130 aa2.79□□□□□ -1.96
RGPD1-204ENST00000559485 SLC8A1P32418 973 aa2.79□□□□□ -1.96
RGPD1-204ENST00000559485 LZICQ8WZA0 190 aa2.79□□□□□ -1.96
RGPD1-204ENST00000559485 CEP89Q96ST8 783 aa2.79□□□□□ -1.96
RGPD1-204ENST00000559485 RABEP2Q9H5N1 569 aa2.79□□□□□ -1.96
RGPD1-204ENST00000559485 CLIP2Q9UDT6 1046 aa2.79□□□□□ -1.96
RGPD1-204ENST00000559485 NLRP1Q9C000 1473 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms