RNA–Protein interactions for RNA: ENST00000558554.5

IDH3A-207, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2 BASIC

Gene IDH3A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-207ENST00000558554 ATP6V1AP38606 617 aa16.8■□□□□ 0.28
IDH3A-207ENST00000558554 SMIM5Q71RC9 77 aa16.8■□□□□ 0.28
IDH3A-207ENST00000558554 LGR6Q9HBX8 967 aa16.8■□□□□ 0.28
IDH3A-207ENST00000558554 ATG3Q9NT62 314 aa16.8■□□□□ 0.28
IDH3A-207ENST00000558554 COL5A3P25940 1745 aaPredicted RBP16.8■□□□□ 0.28
IDH3A-207ENST00000558554 LOC102724428A0A0B4J2F2 783 aa16.79■□□□□ 0.28
IDH3A-207ENST00000558554 ERVV-2B6SEH9 535 aa16.79■□□□□ 0.28
IDH3A-207ENST00000558554 PTCD1O75127 700 aaKnown RBP16.79■□□□□ 0.28
IDH3A-207ENST00000558554 SIK1P57059 783 aa16.79■□□□□ 0.28
IDH3A-207ENST00000558554 AKT1S1Q96B36 256 aa16.79■□□□□ 0.28
IDH3A-207ENST00000558554 AK7Q96M32 723 aa16.79■□□□□ 0.28
IDH3A-207ENST00000558554 PLEKHG2Q9H7P9 1386 aa16.78■□□□□ 0.28
IDH3A-207ENST00000558554 KLHL34Q8N239 644 aa16.78■□□□□ 0.28
IDH3A-207ENST00000558554 PNPLA7Q6ZV29 1317 aa16.78■□□□□ 0.28
IDH3A-207ENST00000558554 TJP1Q07157 1748 aa16.78■□□□□ 0.28
IDH3A-207ENST00000558554 SIPA1L3O60292 1781 aaPredicted RBP16.78■□□□□ 0.28
IDH3A-207ENST00000558554 RSPH6AQ9H0K4 717 aa16.77■□□□□ 0.28
IDH3A-207ENST00000558554 MAP3K5Q99683 1374 aa16.77■□□□□ 0.28
IDH3A-207ENST00000558554 RNMTO43148 476 aaKnown RBP16.77■□□□□ 0.27
IDH3A-207ENST00000558554 MSL1Q68DK7 614 aa16.77■□□□□ 0.27
IDH3A-207ENST00000558554 LINC00116Q8NCU8 138 aa16.77■□□□□ 0.27
IDH3A-207ENST00000558554 PHACTR3Q96KR7 559 aa16.77■□□□□ 0.27
IDH3A-207ENST00000558554 SLC39A6Q13433 755 aa16.76■□□□□ 0.27
IDH3A-207ENST00000558554 GAS2L2Q8NHY3 880 aa16.76■□□□□ 0.27
IDH3A-207ENST00000558554 ADAMTS7Q9UKP4 1686 aa16.75■□□□□ 0.27
IDH3A-207ENST00000558554 ITPK1Q13572 414 aa16.75■□□□□ 0.27
IDH3A-207ENST00000558554 RALBP1Q15311 655 aa16.75■□□□□ 0.27
IDH3A-207ENST00000558554 GNAT3A8MTJ3 354 aa16.74■□□□□ 0.27
IDH3A-207ENST00000558554 NEFMP07197 916 aa16.74■□□□□ 0.27
IDH3A-207ENST00000558554 SLC52A2Q9HAB3 445 aa16.74■□□□□ 0.27
IDH3A-207ENST00000558554 MYBBP1AQ9BQG0 1328 aaKnown RBP16.74■□□□□ 0.27
IDH3A-207ENST00000558554 MYH14Q7Z406 1995 aaKnown RBP16.74■□□□□ 0.27
IDH3A-207ENST00000558554 GNPATO15228 680 aa16.73■□□□□ 0.27
IDH3A-207ENST00000558554 MTFR1LQ9H019 292 aa16.73■□□□□ 0.27
IDH3A-207ENST00000558554 MRC1P22897 1456 aa16.73■□□□□ 0.27
IDH3A-207ENST00000558554 UBR2Q8IWV8 1755 aa16.73■□□□□ 0.27
IDH3A-207ENST00000558554 ZNF316A6NFI3 1004 aaPredicted RBP16.72■□□□□ 0.27
IDH3A-207ENST00000558554 TEFQ10587 303 aa16.72■□□□□ 0.27
IDH3A-207ENST00000558554 COL23A1Q86Y22 540 aaPredicted RBP16.72■□□□□ 0.27
IDH3A-207ENST00000558554 ZNF831Q5JPB2 1677 aa16.72■□□□□ 0.27
IDH3A-207ENST00000558554 C4AP0C0L4 1744 aa16.72■□□□□ 0.27
IDH3A-207ENST00000558554 AMIGO3Q86WK7 504 aa16.72■□□□□ 0.27
IDH3A-207ENST00000558554 MAPK8IP3Q9UPT6 1336 aa16.71■□□□□ 0.27
IDH3A-207ENST00000558554 DCTN1Q14203 1278 aa16.71■□□□□ 0.27
IDH3A-207ENST00000558554 MCM10Q7L590 875 aa16.71■□□□□ 0.27
IDH3A-207ENST00000558554 RTF1Q92541 710 aaKnown RBP16.71■□□□□ 0.27
IDH3A-207ENST00000558554 SLC4A9Q96Q91 983 aa16.71■□□□□ 0.27
IDH3A-207ENST00000558554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.69■□□□□ 0.26
IDH3A-207ENST00000558554 FCHSD2O94868 740 aa16.69■□□□□ 0.26
IDH3A-207ENST00000558554 PTGER2P43116 358 aa16.69■□□□□ 0.26
IDH3A-207ENST00000558554 TTC5Q8N0Z6 440 aa16.69■□□□□ 0.26
IDH3A-207ENST00000558554 POLD1P28340 1107 aa16.68■□□□□ 0.26
IDH3A-207ENST00000558554 CCDC146Q8IYE0 955 aa16.68■□□□□ 0.26
IDH3A-207ENST00000558554 IL17REQ8NFR9 667 aa16.68■□□□□ 0.26
IDH3A-207ENST00000558554 KCPQ6ZWJ8 1503 aa16.68■□□□□ 0.26
IDH3A-207ENST00000558554 WDR43Q15061 677 aaKnown RBP eCLIP16.68■□□□□ 0.26
IDH3A-207ENST00000558554 PRKRIP1Q9H875 184 aaPredicted RBP16.68■□□□□ 0.26
IDH3A-207ENST00000558554 COL24A1Q17RW2 1714 aa16.68■□□□□ 0.26
IDH3A-207ENST00000558554 FHDC1Q9C0D6 1143 aaPredicted RBP16.67■□□□□ 0.26
IDH3A-207ENST00000558554 DNAJC10Q8IXB1 793 aa16.66■□□□□ 0.26
IDH3A-207ENST00000558554 ARXQ96QS3 562 aa16.66■□□□□ 0.26
IDH3A-207ENST00000558554 RTCBQ9Y3I0 505 aaKnown RBP16.66■□□□□ 0.26
IDH3A-207ENST00000558554 CICQ96RK0 1608 aaPredicted RBP16.65■□□□□ 0.26
IDH3A-207ENST00000558554 BTBD11A6QL63 1104 aa16.64■□□□□ 0.25
IDH3A-207ENST00000558554 CRKLP46109 303 aaKnown RBP16.64■□□□□ 0.25
IDH3A-207ENST00000558554 NEUROD2Q15784 382 aa16.64■□□□□ 0.25
IDH3A-207ENST00000558554 HMGB2P26583 209 aaKnown RBP16.64■□□□□ 0.25
IDH3A-207ENST00000558554 FLAD1Q8NFF5 587 aa16.64■□□□□ 0.25
IDH3A-207ENST00000558554 SLC16A10Q8TF71 515 aa16.64■□□□□ 0.25
IDH3A-207ENST00000558554 THUMPD2Q9BTF0 503 aaKnown RBP16.64■□□□□ 0.25
IDH3A-207ENST00000558554 RRP7AQ9Y3A4 280 aaKnown RBP16.64■□□□□ 0.25
IDH3A-207ENST00000558554 ZNF330Q9Y3S2 320 aaPredicted RBP16.64■□□□□ 0.25
IDH3A-207ENST00000558554 KCNQ3O43525 872 aa16.63■□□□□ 0.25
IDH3A-207ENST00000558554 SSFA2P28290 1259 aa16.63■□□□□ 0.25
IDH3A-207ENST00000558554 PELP1Q8IZL8 1130 aaKnown RBP16.63■□□□□ 0.25
IDH3A-207ENST00000558554 PNNQ9H307 717 aaKnown RBP16.63■□□□□ 0.25
IDH3A-207ENST00000558554 KDM3BQ7LBC6 1761 aa16.62■□□□□ 0.25
IDH3A-207ENST00000558554 SENP3-EIF4A1A0A087X0R7 540 aa16.62■□□□□ 0.25
IDH3A-207ENST00000558554 TRAPPC3LQ5T215 181 aa16.62■□□□□ 0.25
IDH3A-207ENST00000558554 PLEKHF1Q96S99 279 aa16.62■□□□□ 0.25
IDH3A-207ENST00000558554 SGIP1Q9BQI5 828 aa16.62■□□□□ 0.25
IDH3A-207ENST00000558554 MIS18AQ9NYP9 233 aa16.62■□□□□ 0.25
IDH3A-207ENST00000558554 CNTNAP4Q9C0A0 1308 aa16.62■□□□□ 0.25
IDH3A-207ENST00000558554 GOLGB1Q14789 3259 aaKnown RBP16.61■□□□□ 0.25
IDH3A-207ENST00000558554 CEMIPQ8WUJ3 1361 aa16.61■□□□□ 0.25
IDH3A-207ENST00000558554 RFC4P35249 363 aa16.61■□□□□ 0.25
IDH3A-207ENST00000558554 NFE2L2Q16236 605 aa16.61■□□□□ 0.25
IDH3A-207ENST00000558554 ZNF790Q6PG37 636 aa16.61■□□□□ 0.25
IDH3A-207ENST00000558554 CANXP27824 592 aaKnown RBP16.6■□□□□ 0.25
IDH3A-207ENST00000558554 ZNF496Q96IT1 587 aaPredicted RBP16.6■□□□□ 0.25
IDH3A-207ENST00000558554 LAMB4A4D0S4 1761 aa16.6■□□□□ 0.25
IDH3A-207ENST00000558554 UTRNP46939 3433 aa16.6■□□□□ 0.25
IDH3A-207ENST00000558554 ARHGEF1Q92888 912 aaKnown RBP16.6■□□□□ 0.25
IDH3A-207ENST00000558554 SYT17Q9BSW7 474 aa16.6■□□□□ 0.25
IDH3A-207ENST00000558554 WWC3Q9ULE0 1092 aa16.6■□□□□ 0.25
IDH3A-207ENST00000558554 DCAF8L1A6NGE4 600 aa16.59■□□□□ 0.25
IDH3A-207ENST00000558554 ANP32CO43423 234 aa16.59■□□□□ 0.25
IDH3A-207ENST00000558554 RIPK4P57078 832 aa16.59■□□□□ 0.25
IDH3A-207ENST00000558554 CCDC87Q9NVE4 849 aa16.59■□□□□ 0.25
IDH3A-207ENST00000558554 SRP68Q9UHB9 627 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms