RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 GJA5P36382 358 aa9.51□□□□□ -0.89
MARK3-212ENST00000558223 NLRP13Q86W25 1043 aa9.51□□□□□ -0.89
MARK3-212ENST00000558223 MYOM2P54296 1465 aa9.51□□□□□ -0.89
MARK3-212ENST00000558223 SCAF11Q99590 1463 aaKnown RBP9.51□□□□□ -0.89
MARK3-212ENST00000558223 ELOAQ14241 798 aaKnown RBP9.5□□□□□ -0.89
MARK3-212ENST00000558223 IFFO2Q5TF58 517 aa9.5□□□□□ -0.89
MARK3-212ENST00000558223 PRR7Q8TB68 274 aa9.5□□□□□ -0.89
MARK3-212ENST00000558223 COL17A1Q9UMD9 1497 aaPredicted RBP9.5□□□□□ -0.89
MARK3-212ENST00000558223 BCORL1Q5H9F3 1711 aa9.5□□□□□ -0.89
MARK3-212ENST00000558223 ZMYM4Q5VZL5 1548 aa9.5□□□□□ -0.89
MARK3-212ENST00000558223 GLI2P10070 1586 aa9.5□□□□□ -0.89
MARK3-212ENST00000558223 KIAA1210Q9ULL0 1709 aa9.49□□□□□ -0.89
MARK3-212ENST00000558223 SOWAHDA6NJG2 315 aa9.49□□□□□ -0.89
MARK3-212ENST00000558223 TRIM6-TRIM34B2RNG4 842 aa9.49□□□□□ -0.89
MARK3-212ENST00000558223 PDE3BQ13370 1112 aa9.49□□□□□ -0.89
MARK3-212ENST00000558223 TMEM164Q5U3C3 297 aa9.49□□□□□ -0.89
MARK3-212ENST00000558223 PADI6Q6TGC4 694 aa9.49□□□□□ -0.89
MARK3-212ENST00000558223 TESK2Q96S53 571 aa9.49□□□□□ -0.89
MARK3-212ENST00000558223 BIN2Q9UBW5 565 aaPredicted RBP9.49□□□□□ -0.89
MARK3-212ENST00000558223 PCDHB15Q9Y5E8 787 aa9.49□□□□□ -0.89
MARK3-212ENST00000558223 RNF17Q9BXT8 1623 aaKnown RBP9.49□□□□□ -0.89
MARK3-212ENST00000558223 E9PCH4 1651 aa9.48□□□□□ -0.89
MARK3-212ENST00000558223 ARHGAP31Q2M1Z3 1444 aa9.48□□□□□ -0.89
MARK3-212ENST00000558223 SPHKAPQ2M3C7 1700 aa9.48□□□□□ -0.89
MARK3-212ENST00000558223 EFCAB6Q5THR3 1501 aa9.48□□□□□ -0.89
MARK3-212ENST00000558223 NDUFV2P19404 249 aa9.48□□□□□ -0.89
MARK3-212ENST00000558223 VAMP1P23763 118 aa9.48□□□□□ -0.89
MARK3-212ENST00000558223 NBPF1Q3BBV0 1214 aa9.48□□□□□ -0.89
MARK3-212ENST00000558223 NAALADL2Q58DX5 795 aa9.48□□□□□ -0.89
MARK3-212ENST00000558223 TBC1D9Q6ZT07 1266 aa9.48□□□□□ -0.89
MARK3-212ENST00000558223 FAM9BQ8IZU0 186 aa9.48□□□□□ -0.89
MARK3-212ENST00000558223 BCL11AQ9H165 835 aa9.48□□□□□ -0.89
MARK3-212ENST00000558223 NPC1L1Q9UHC9 1359 aa9.48□□□□□ -0.89
MARK3-212ENST00000558223 SBNO2Q9Y2G9 1366 aa9.48□□□□□ -0.89
MARK3-212ENST00000558223 CEP152O94986 1710 aa9.48□□□□□ -0.89
MARK3-212ENST00000558223 HECW2Q9P2P5 1572 aa9.47□□□□□ -0.89
MARK3-212ENST00000558223 ANKRD62A6NC57 917 aa9.47□□□□□ -0.89
MARK3-212ENST00000558223 ANKRD33BA6NCL7 494 aa9.47□□□□□ -0.89
MARK3-212ENST00000558223 PER1O15534 1290 aaPredicted RBP9.47□□□□□ -0.89
MARK3-212ENST00000558223 ATP9BO43861 1147 aa9.47□□□□□ -0.89
MARK3-212ENST00000558223 CD46P15529 392 aa9.47□□□□□ -0.89
MARK3-212ENST00000558223 BRD2P25440 801 aaKnown RBP9.47□□□□□ -0.89
MARK3-212ENST00000558223 NOM1Q5C9Z4 860 aaKnown RBP9.47□□□□□ -0.89
MARK3-212ENST00000558223 PRPF38BQ5VTL8 546 aaKnown RBP9.47□□□□□ -0.89
MARK3-212ENST00000558223 LAPTM4BQ86VI4 370 aa9.47□□□□□ -0.89
MARK3-212ENST00000558223 DHX37Q8IY37 1157 aaKnown RBP9.47□□□□□ -0.89
MARK3-212ENST00000558223 RBM46Q8TBY0 533 aaKnown RBP9.47□□□□□ -0.89
MARK3-212ENST00000558223 CERKQ8TCT0 537 aa9.47□□□□□ -0.89
MARK3-212ENST00000558223 CABLES1Q8TDN4 633 aa9.47□□□□□ -0.89
MARK3-212ENST00000558223 PNISRQ8TF01 805 aaKnown RBP9.47□□□□□ -0.89
MARK3-212ENST00000558223 SLC52A1Q9NWF4 448 aa9.47□□□□□ -0.89
MARK3-212ENST00000558223 SEPT9Q9UHD8 586 aaPredicted RBP9.47□□□□□ -0.89
MARK3-212ENST00000558223 PARD3Q8TEW0 1356 aa9.47□□□□□ -0.89
MARK3-212ENST00000558223 KIDINS220Q9ULH0 1771 aa9.47□□□□□ -0.89
MARK3-212ENST00000558223 PHLDB3Q6NSJ2 640 aa9.46□□□□□ -0.9
MARK3-212ENST00000558223 STK32AQ8WU08 396 aa9.46□□□□□ -0.9
MARK3-212ENST00000558223 ZFRQ96KR1 1074 aaKnown RBP9.46□□□□□ -0.9
MARK3-212ENST00000558223 TSKSQ9UJT2 592 aa9.46□□□□□ -0.9
MARK3-212ENST00000558223 NOVA2Q9UNW9 492 aaKnown RBP9.46□□□□□ -0.9
MARK3-212ENST00000558223 RGS20O76081 388 aa9.45□□□□□ -0.9
MARK3-212ENST00000558223 ANKK1Q8NFD2 765 aa9.45□□□□□ -0.9
MARK3-212ENST00000558223 TRIM34Q9BYJ4 488 aa9.45□□□□□ -0.9
MARK3-212ENST00000558223 ZBTB3Q9H5J0 574 aa9.45□□□□□ -0.9
MARK3-212ENST00000558223 HMX1Q9NP08 348 aaPredicted RBP9.45□□□□□ -0.9
MARK3-212ENST00000558223 LRPPRCP42704 1394 aaKnown RBP9.45□□□□□ -0.9
MARK3-212ENST00000558223 MROH1Q8NDA8 1641 aa9.45□□□□□ -0.9
MARK3-212ENST00000558223 MADDQ8WXG6 1647 aa9.45□□□□□ -0.9
MARK3-212ENST00000558223 A0A0G2JS52 829 aa9.44□□□□□ -0.9
MARK3-212ENST00000558223 GPR37L1O60883 481 aa9.44□□□□□ -0.9
MARK3-212ENST00000558223 SSFA2P28290 1259 aa9.44□□□□□ -0.9
MARK3-212ENST00000558223 BCAMP50895 628 aa9.44□□□□□ -0.9
MARK3-212ENST00000558223 SULF1Q8IWU6 871 aa9.44□□□□□ -0.9
MARK3-212ENST00000558223 NGEFQ8N5V2 710 aa9.44□□□□□ -0.9
MARK3-212ENST00000558223 ZMIZ1Q9ULJ6 1067 aa9.44□□□□□ -0.9
MARK3-212ENST00000558223 KNSTRNQ9Y448 316 aa9.44□□□□□ -0.9
MARK3-212ENST00000558223 SMG6Q86US8 1419 aaKnown RBP9.44□□□□□ -0.9
MARK3-212ENST00000558223 NRXN1Q9ULB1 1477 aa9.44□□□□□ -0.9
MARK3-212ENST00000558223 CLTCL1P53675 1640 aa9.44□□□□□ -0.9
MARK3-212ENST00000558223 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.43□□□□□ -0.9
MARK3-212ENST00000558223 SOWAHBA6NEL2 793 aa9.43□□□□□ -0.9
MARK3-212ENST00000558223 NPAS4Q8IUM7 802 aa9.43□□□□□ -0.9
MARK3-212ENST00000558223 PNMA1Q8ND90 353 aa9.43□□□□□ -0.9
MARK3-212ENST00000558223 PANK3Q9H999 370 aa9.43□□□□□ -0.9
MARK3-212ENST00000558223 FAM198AQ9UFP1 575 aa9.43□□□□□ -0.9
MARK3-212ENST00000558223 SETBP1Q9Y6X0 1596 aa9.42□□□□□ -0.9
MARK3-212ENST00000558223 ZFYVE9O95405 1425 aa9.42□□□□□ -0.9
MARK3-212ENST00000558223 NOS1P29475 1434 aa9.42□□□□□ -0.9
MARK3-212ENST00000558223 CTDSPL2Q05D32 466 aa9.42□□□□□ -0.9
MARK3-212ENST00000558223 GGT6Q6P531 493 aa9.42□□□□□ -0.9
MARK3-212ENST00000558223 C14orf93Q9H972 538 aaKnown RBP9.42□□□□□ -0.9
MARK3-212ENST00000558223 NUDCQ9Y266 331 aa9.42□□□□□ -0.9
MARK3-212ENST00000558223 NPATQ14207 1427 aa9.41□□□□□ -0.9
MARK3-212ENST00000558223 KIF1BO60333 1816 aa9.41□□□□□ -0.9
MARK3-212ENST00000558223 SERPINB4P48594 390 aa9.41□□□□□ -0.9
MARK3-212ENST00000558223 FAM98CQ17RN3 349 aaKnown RBP9.41□□□□□ -0.9
MARK3-212ENST00000558223 CCDC184Q52MB2 194 aa9.41□□□□□ -0.9
MARK3-212ENST00000558223 CDCA7LQ96GN5 454 aa9.41□□□□□ -0.9
MARK3-212ENST00000558223 PPP4R2Q9NY27 417 aa9.41□□□□□ -0.9
MARK3-212ENST00000558223 ZC3H13Q5T200 1668 aaKnown RBP9.41□□□□□ -0.9
MARK3-212ENST00000558223 MAP3K4Q9Y6R4 1608 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms