RNA–Protein interactions for RNA: ENST00000557769.5

CCDC85C-207, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2 BASIC

Gene CCDC85C, Length 3,793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-207ENST00000557769 API5Q9BZZ5 524 aaKnown RBP13.21□□□□□ -0.29
CCDC85C-207ENST00000557769 KRT24Q2M2I5 525 aa13.21□□□□□ -0.29
CCDC85C-207ENST00000557769 SASS6Q6UVJ0 657 aa13.21□□□□□ -0.29
CCDC85C-207ENST00000557769 CCDC9Q9Y3X0 531 aaKnown RBP13.21□□□□□ -0.29
CCDC85C-207ENST00000557769 HMMRO75330 724 aa13.21□□□□□ -0.3
CCDC85C-207ENST00000557769 HCLS1P14317 486 aaPredicted RBP13.21□□□□□ -0.3
CCDC85C-207ENST00000557769 SNX21Q969T3 373 aa13.21□□□□□ -0.3
CCDC85C-207ENST00000557769 ZKSCAN5Q9Y2L8 839 aa13.21□□□□□ -0.3
CCDC85C-207ENST00000557769 IL1RAPL2Q9NP60 686 aa13.2□□□□□ -0.3
CCDC85C-207ENST00000557769 CABP1Q9NZU7 370 aa13.2□□□□□ -0.3
CCDC85C-207ENST00000557769 F6X3S4 739 aa13.2□□□□□ -0.3
CCDC85C-207ENST00000557769 ATP7BP35670 1465 aa13.19□□□□□ -0.3
CCDC85C-207ENST00000557769 RRS1Q15050 365 aaKnown RBP13.19□□□□□ -0.3
CCDC85C-207ENST00000557769 LTV1Q96GA3 475 aaPredicted RBP13.19□□□□□ -0.3
CCDC85C-207ENST00000557769 TRERF1Q96PN7 1200 aa13.19□□□□□ -0.3
CCDC85C-207ENST00000557769 DCCP43146 1447 aa13.19□□□□□ -0.3
CCDC85C-207ENST00000557769 MBD3O95983 291 aa13.19□□□□□ -0.3
CCDC85C-207ENST00000557769 RBM25P49756 843 aaKnown RBP13.19□□□□□ -0.3
CCDC85C-207ENST00000557769 RTF1Q92541 710 aaKnown RBP13.19□□□□□ -0.3
CCDC85C-207ENST00000557769 TMEM63CQ9P1W3 806 aa13.19□□□□□ -0.3
CCDC85C-207ENST00000557769 IQSEC2Q5JU85 1478 aa13.19□□□□□ -0.3
CCDC85C-207ENST00000557769 SDSP20132 328 aa13.19□□□□□ -0.3
CCDC85C-207ENST00000557769 GNAI1P63096 354 aa13.19□□□□□ -0.3
CCDC85C-207ENST00000557769 ERC2O15083 957 aa13.18□□□□□ -0.3
CCDC85C-207ENST00000557769 CAMK4Q16566 473 aa13.18□□□□□ -0.3
CCDC85C-207ENST00000557769 FERMT3Q86UX7 667 aa13.18□□□□□ -0.3
CCDC85C-207ENST00000557769 NSFL1CQ9UNZ2 370 aaKnown RBP13.18□□□□□ -0.3
CCDC85C-207ENST00000557769 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC85C-207ENST00000557769 ITSN1Q15811 1721 aa13.18□□□□□ -0.3
CCDC85C-207ENST00000557769 KIF3AQ9Y496 699 aa13.17□□□□□ -0.3
CCDC85C-207ENST00000557769 ADCY5O95622 1261 aa13.17□□□□□ -0.3
CCDC85C-207ENST00000557769 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
CCDC85C-207ENST00000557769 LMBRD1Q9NUN5 540 aa13.17□□□□□ -0.3
CCDC85C-207ENST00000557769 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
CCDC85C-207ENST00000557769 AKAP12Q02952 1782 aa13.17□□□□□ -0.3
CCDC85C-207ENST00000557769 FKBP5Q13451 457 aaPredicted RBP13.17□□□□□ -0.3
CCDC85C-207ENST00000557769 PDCL2Q8N4E4 241 aa13.17□□□□□ -0.3
CCDC85C-207ENST00000557769 MST1RQ04912 1400 aa13.16□□□□□ -0.3
CCDC85C-207ENST00000557769 LRSAM1Q6UWE0 723 aa13.16□□□□□ -0.3
CCDC85C-207ENST00000557769 ZBTB9Q96C00 473 aa13.16□□□□□ -0.3
CCDC85C-207ENST00000557769 STK31Q9BXU1 1019 aa13.16□□□□□ -0.3
CCDC85C-207ENST00000557769 GIMAP6Q6P9H5 292 aa13.16□□□□□ -0.3
CCDC85C-207ENST00000557769 CWC22Q9HCG8 908 aaKnown RBP13.16□□□□□ -0.3
CCDC85C-207ENST00000557769 CD163L1Q9NR16 1453 aa13.16□□□□□ -0.3
CCDC85C-207ENST00000557769 INSRP06213 1382 aa13.16□□□□□ -0.3
CCDC85C-207ENST00000557769 ERICH4A6NGS2 130 aa13.16□□□□□ -0.3
CCDC85C-207ENST00000557769 ZRSR1Q15695 479 aaKnown RBP13.16□□□□□ -0.3
CCDC85C-207ENST00000557769 MCM10Q7L590 875 aa13.16□□□□□ -0.3
CCDC85C-207ENST00000557769 TMX3Q96JJ7 454 aa13.16□□□□□ -0.3
CCDC85C-207ENST00000557769 CFAP44Q96MT7 982 aa13.16□□□□□ -0.3
CCDC85C-207ENST00000557769 CGNQ9P2M7 1197 aaKnown RBP13.16□□□□□ -0.3
CCDC85C-207ENST00000557769 NOL7Q9UMY1 257 aaKnown RBP13.16□□□□□ -0.3
CCDC85C-207ENST00000557769 EMILIN1Q9Y6C2 1016 aa13.16□□□□□ -0.3
CCDC85C-207ENST00000557769 PRR36Q9H6K5 1346 aa13.15□□□□□ -0.3
CCDC85C-207ENST00000557769 CEBPZQ03701 1054 aaKnown RBP13.15□□□□□ -0.3
CCDC85C-207ENST00000557769 PROSER2Q86WR7 435 aaPredicted RBP13.15□□□□□ -0.3
CCDC85C-207ENST00000557769 C8orf58Q8NAV2 365 aa13.15□□□□□ -0.3
CCDC85C-207ENST00000557769 GPT2Q8TD30 523 aa13.15□□□□□ -0.3
CCDC85C-207ENST00000557769 PHACTR3Q96KR7 559 aa13.15□□□□□ -0.3
CCDC85C-207ENST00000557769 NRKQ7Z2Y5 1582 aa13.15□□□□□ -0.3
CCDC85C-207ENST00000557769 TRIM35Q9UPQ4 493 aa13.15□□□□□ -0.3
CCDC85C-207ENST00000557769 DYNC1I1O14576 645 aa13.15□□□□□ -0.31
CCDC85C-207ENST00000557769 GOLGA6L6A8MZA4 724 aa13.14□□□□□ -0.31
CCDC85C-207ENST00000557769 EIF2S2P20042 333 aaKnown RBP13.14□□□□□ -0.31
CCDC85C-207ENST00000557769 GADD45BO75293 160 aaPredicted RBP13.14□□□□□ -0.31
CCDC85C-207ENST00000557769 MTERF4Q7Z6M4 381 aaKnown RBP13.14□□□□□ -0.31
CCDC85C-207ENST00000557769 C16orf45Q96MC5 204 aaPredicted RBP13.14□□□□□ -0.31
CCDC85C-207ENST00000557769 ZNF692Q9BU19 519 aaPredicted RBP13.14□□□□□ -0.31
CCDC85C-207ENST00000557769 TRIM5Q9C035 493 aa13.14□□□□□ -0.31
CCDC85C-207ENST00000557769 MON2Q7Z3U7 1717 aa13.14□□□□□ -0.31
CCDC85C-207ENST00000557769 TTC22Q5TAA0 569 aa13.14□□□□□ -0.31
CCDC85C-207ENST00000557769 NUTM1Q86Y26 1132 aa13.14□□□□□ -0.31
CCDC85C-207ENST00000557769 PLEKHM2Q8IWE5 1019 aa13.14□□□□□ -0.31
CCDC85C-207ENST00000557769 WASLO00401 505 aaPredicted RBP13.13□□□□□ -0.31
CCDC85C-207ENST00000557769 NOLC1Q14978 699 aaKnown RBP eCLIP13.13□□□□□ -0.31
CCDC85C-207ENST00000557769 MEIS3Q99687 375 aa13.13□□□□□ -0.31
CCDC85C-207ENST00000557769 MBIPQ9NS73 344 aa13.13□□□□□ -0.31
CCDC85C-207ENST00000557769 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.13□□□□□ -0.31
CCDC85C-207ENST00000557769 V9GYY5 206 aaPredicted RBP13.13□□□□□ -0.31
CCDC85C-207ENST00000557769 GSPT1P15170 499 aaKnown RBP13.13□□□□□ -0.31
CCDC85C-207ENST00000557769 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
CCDC85C-207ENST00000557769 CKAP2LQ8IYA6 745 aa13.12□□□□□ -0.31
CCDC85C-207ENST00000557769 PPP1R9BQ96SB3 815 aa13.12□□□□□ -0.31
CCDC85C-207ENST00000557769 ANKARQ7Z5J8 1434 aa13.12□□□□□ -0.31
CCDC85C-207ENST00000557769 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
CCDC85C-207ENST00000557769 CT47B1P0C2W7 299 aaPredicted RBP13.12□□□□□ -0.31
CCDC85C-207ENST00000557769 BICD2Q8TD16 824 aa13.12□□□□□ -0.31
CCDC85C-207ENST00000557769 CNPY2Q9Y2B0 182 aa13.12□□□□□ -0.31
CCDC85C-207ENST00000557769 C1orf167Q5SNV9 1468 aa13.12□□□□□ -0.31
CCDC85C-207ENST00000557769 POLR3AO14802 1390 aaPredicted RBP13.12□□□□□ -0.31
CCDC85C-207ENST00000557769 TRPM3Q9HCF6 1732 aaPredicted RBP13.12□□□□□ -0.31
CCDC85C-207ENST00000557769 HMGN5P82970 282 aaKnown RBP13.12□□□□□ -0.31
CCDC85C-207ENST00000557769 SULT6B1Q6IMI4 303 aa13.12□□□□□ -0.31
CCDC85C-207ENST00000557769 USP48Q86UV5 1035 aa13.12□□□□□ -0.31
CCDC85C-207ENST00000557769 C19orf44Q9H6X5 657 aa13.12□□□□□ -0.31
CCDC85C-207ENST00000557769 ROBO1Q9Y6N7 1651 aa13.12□□□□□ -0.31
CCDC85C-207ENST00000557769 PPFIA3O75145 1194 aa13.11□□□□□ -0.31
CCDC85C-207ENST00000557769 STK3Q13188 491 aa13.11□□□□□ -0.31
CCDC85C-207ENST00000557769 TPD52L1Q16890 204 aaPredicted RBP13.11□□□□□ -0.31
CCDC85C-207ENST00000557769 USP26Q9BXU7 913 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms