RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 U2AF1L5P0DN76 240 aaPredicted RBP18.82■□□□□ 0.6
SLIRP-207ENST00000556831 U2AF1Q01081 240 aaKnown RBP eCLIP18.82■□□□□ 0.6
SLIRP-207ENST00000556831 AMIGO3Q86WK7 504 aa18.82■□□□□ 0.6
SLIRP-207ENST00000556831 ATF5Q9Y2D1 282 aaPredicted RBP18.82■□□□□ 0.6
SLIRP-207ENST00000556831 SCN11AQ9UI33 1791 aa18.82■□□□□ 0.6
SLIRP-207ENST00000556831 PNPLA7Q6ZV29 1317 aa18.81■□□□□ 0.6
SLIRP-207ENST00000556831 QSER1Q2KHR3 1735 aa18.81■□□□□ 0.6
SLIRP-207ENST00000556831 ERVV-2B6SEH9 535 aa18.81■□□□□ 0.6
SLIRP-207ENST00000556831 CABP4P57796 275 aa18.81■□□□□ 0.6
SLIRP-207ENST00000556831 AKAP4Q5JQC9 854 aa18.81■□□□□ 0.6
SLIRP-207ENST00000556831 ATG3Q9NT62 314 aa18.81■□□□□ 0.6
SLIRP-207ENST00000556831 MTHFSDQ2M296 383 aaKnown RBP18.8■□□□□ 0.6
SLIRP-207ENST00000556831 GAS2L2Q8NHY3 880 aa18.8■□□□□ 0.6
SLIRP-207ENST00000556831 SLC4A9Q96Q91 983 aa18.79■□□□□ 0.6
SLIRP-207ENST00000556831 LGR6Q9HBX8 967 aa18.79■□□□□ 0.6
SLIRP-207ENST00000556831 C4BP0C0L5 1744 aa18.79■□□□□ 0.6
SLIRP-207ENST00000556831 HSPA6P17066 643 aa18.78■□□□□ 0.6
SLIRP-207ENST00000556831 PTGER2P43116 358 aa18.78■□□□□ 0.6
SLIRP-207ENST00000556831 PRELPP51888 382 aa18.78■□□□□ 0.6
SLIRP-207ENST00000556831 ITPK1Q13572 414 aa18.78■□□□□ 0.6
SLIRP-207ENST00000556831 ADAMTS7Q9UKP4 1686 aa18.77■□□□□ 0.6
SLIRP-207ENST00000556831 ZNF316A6NFI3 1004 aaPredicted RBP18.77■□□□□ 0.6
SLIRP-207ENST00000556831 PRKAR2BP31323 418 aa18.77■□□□□ 0.6
SLIRP-207ENST00000556831 LINC00116Q8NCU8 138 aa18.77■□□□□ 0.6
SLIRP-207ENST00000556831 MYBBP1AQ9BQG0 1328 aaKnown RBP18.76■□□□□ 0.59
SLIRP-207ENST00000556831 PHACTR3Q96KR7 559 aa18.76■□□□□ 0.59
SLIRP-207ENST00000556831 TFCP2L1Q9NZI6 479 aa18.76■□□□□ 0.59
SLIRP-207ENST00000556831 LOC102724428A0A0B4J2F2 783 aa18.75■□□□□ 0.59
SLIRP-207ENST00000556831 SIK1P57059 783 aa18.75■□□□□ 0.59
SLIRP-207ENST00000556831 NFATC2IPQ8NCF5 419 aa18.75■□□□□ 0.59
SLIRP-207ENST00000556831 SGIP1Q9BQI5 828 aa18.75■□□□□ 0.59
SLIRP-207ENST00000556831 RSPH6AQ9H0K4 717 aa18.75■□□□□ 0.59
SLIRP-207ENST00000556831 MAP3K5Q99683 1374 aa18.75■□□□□ 0.59
SLIRP-207ENST00000556831 UBR3Q6ZT12 1888 aa18.75■□□□□ 0.59
SLIRP-207ENST00000556831 FCHSD2O94868 740 aa18.74■□□□□ 0.59
SLIRP-207ENST00000556831 COL23A1Q86Y22 540 aaPredicted RBP18.74■□□□□ 0.59
SLIRP-207ENST00000556831 PNNQ9H307 717 aaKnown RBP18.74■□□□□ 0.59
SLIRP-207ENST00000556831 MRC1P22897 1456 aa18.73■□□□□ 0.59
SLIRP-207ENST00000556831 GNAT3A8MTJ3 354 aa18.73■□□□□ 0.59
SLIRP-207ENST00000556831 AK7Q96M32 723 aa18.73■□□□□ 0.59
SLIRP-207ENST00000556831 COL5A3P25940 1745 aaPredicted RBP18.73■□□□□ 0.59
SLIRP-207ENST00000556831 COL24A1Q17RW2 1714 aa18.73■□□□□ 0.59
SLIRP-207ENST00000556831 TJP1Q07157 1748 aa18.72■□□□□ 0.59
SLIRP-207ENST00000556831 RNMTO43148 476 aaKnown RBP18.72■□□□□ 0.59
SLIRP-207ENST00000556831 CAPN15O75808 1086 aa18.72■□□□□ 0.59
SLIRP-207ENST00000556831 RBM42Q9BTD8 480 aaKnown RBP18.72■□□□□ 0.59
SLIRP-207ENST00000556831 MAPK8IP3Q9UPT6 1336 aa18.72■□□□□ 0.59
SLIRP-207ENST00000556831 MSH5O43196 834 aa18.71■□□□□ 0.59
SLIRP-207ENST00000556831 ATP6V1AP38606 617 aa18.71■□□□□ 0.59
SLIRP-207ENST00000556831 TEFQ10587 303 aa18.71■□□□□ 0.59
SLIRP-207ENST00000556831 RTF1Q92541 710 aaKnown RBP18.71■□□□□ 0.59
SLIRP-207ENST00000556831 MTFR1LQ9H019 292 aa18.71■□□□□ 0.59
SLIRP-207ENST00000556831 SLC52A2Q9HAB3 445 aa18.71■□□□□ 0.59
SLIRP-207ENST00000556831 SLC39A6Q13433 755 aa18.7■□□□□ 0.58
SLIRP-207ENST00000556831 MYH14Q7Z406 1995 aaKnown RBP18.7■□□□□ 0.58
SLIRP-207ENST00000556831 SIPA1L3O60292 1781 aaPredicted RBP18.69■□□□□ 0.58
SLIRP-207ENST00000556831 PTCD1O75127 700 aaKnown RBP18.69■□□□□ 0.58
SLIRP-207ENST00000556831 PHF14O94880 888 aa18.69■□□□□ 0.58
SLIRP-207ENST00000556831 WDR43Q15061 677 aaKnown RBP eCLIP18.69■□□□□ 0.58
SLIRP-207ENST00000556831 MSL1Q68DK7 614 aa18.69■□□□□ 0.58
SLIRP-207ENST00000556831 FLAD1Q8NFF5 587 aa18.69■□□□□ 0.58
SLIRP-207ENST00000556831 SYT17Q9BSW7 474 aa18.69■□□□□ 0.58
SLIRP-207ENST00000556831 IL17REQ8NFR9 667 aa18.68■□□□□ 0.58
SLIRP-207ENST00000556831 PRKRIP1Q9H875 184 aaPredicted RBP18.68■□□□□ 0.58
SLIRP-207ENST00000556831 ZNF831Q5JPB2 1677 aa18.68■□□□□ 0.58
SLIRP-207ENST00000556831 KCPQ6ZWJ8 1503 aa18.68■□□□□ 0.58
SLIRP-207ENST00000556831 TTC5Q8N0Z6 440 aa18.67■□□□□ 0.58
SLIRP-207ENST00000556831 SLC16A10Q8TF71 515 aa18.66■□□□□ 0.58
SLIRP-207ENST00000556831 UBR2Q8IWV8 1755 aa18.65■□□□□ 0.58
SLIRP-207ENST00000556831 CICQ96RK0 1608 aaPredicted RBP18.64■□□□□ 0.57
SLIRP-207ENST00000556831 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.64■□□□□ 0.57
SLIRP-207ENST00000556831 GNPATO15228 680 aa18.64■□□□□ 0.57
SLIRP-207ENST00000556831 POLD1P28340 1107 aa18.64■□□□□ 0.57
SLIRP-207ENST00000556831 FHDC1Q9C0D6 1143 aaPredicted RBP18.64■□□□□ 0.57
SLIRP-207ENST00000556831 DLG5Q8TDM6 1919 aa18.64■□□□□ 0.57
SLIRP-207ENST00000556831 ANP32CO43423 234 aa18.63■□□□□ 0.57
SLIRP-207ENST00000556831 DCTN1Q14203 1278 aa18.63■□□□□ 0.57
SLIRP-207ENST00000556831 C4AP0C0L4 1744 aa18.63■□□□□ 0.57
SLIRP-207ENST00000556831 KCNQ3O43525 872 aa18.62■□□□□ 0.57
SLIRP-207ENST00000556831 DNAJC10Q8IXB1 793 aa18.62■□□□□ 0.57
SLIRP-207ENST00000556831 TNS4Q8IZW8 715 aa18.62■□□□□ 0.57
SLIRP-207ENST00000556831 ARXQ96QS3 562 aa18.62■□□□□ 0.57
SLIRP-207ENST00000556831 CEMIPQ8WUJ3 1361 aa18.61■□□□□ 0.57
SLIRP-207ENST00000556831 HTATSF1O43719 755 aaKnown RBP18.61■□□□□ 0.57
SLIRP-207ENST00000556831 SSFA2P28290 1259 aa18.61■□□□□ 0.57
SLIRP-207ENST00000556831 MCM10Q7L590 875 aa18.61■□□□□ 0.57
SLIRP-207ENST00000556831 PLEKHF1Q96S99 279 aa18.61■□□□□ 0.57
SLIRP-207ENST00000556831 RTCBQ9Y3I0 505 aaKnown RBP18.61■□□□□ 0.57
SLIRP-207ENST00000556831 CNTNAP4Q9C0A0 1308 aa18.59■□□□□ 0.57
SLIRP-207ENST00000556831 BTBD11A6QL63 1104 aa18.59■□□□□ 0.57
SLIRP-207ENST00000556831 NFE2L2Q16236 605 aa18.59■□□□□ 0.57
SLIRP-207ENST00000556831 COL13A1Q5TAT6 717 aaPredicted RBP18.59■□□□□ 0.57
SLIRP-207ENST00000556831 CRKLP46109 303 aaKnown RBP18.58■□□□□ 0.56
SLIRP-207ENST00000556831 KLHL34Q8N239 644 aa18.58■□□□□ 0.56
SLIRP-207ENST00000556831 GOLGB1Q14789 3259 aaKnown RBP18.57■□□□□ 0.56
SLIRP-207ENST00000556831 LMOD3Q0VAK6 560 aa18.57■□□□□ 0.56
SLIRP-207ENST00000556831 GPR162Q16538 588 aa18.57■□□□□ 0.56
SLIRP-207ENST00000556831 RC3H1Q5TC82 1133 aaKnown RBP18.57■□□□□ 0.56
SLIRP-207ENST00000556831 INTS5Q6P9B9 1019 aaKnown RBP18.57■□□□□ 0.56
SLIRP-207ENST00000556831 ZNF790Q6PG37 636 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms