RNA–Protein interactions for RNA: ENST00000556436.1

SRSF5-214, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-214ENST00000556436 CABP4P57796 275 aa17.35■□□□□ 0.37
SRSF5-214ENST00000556436 SLC52A2Q9HAB3 445 aa17.35■□□□□ 0.37
SRSF5-214ENST00000556436 PALLDQ8WX93 1383 aa17.35■□□□□ 0.37
SRSF5-214ENST00000556436 UBR2Q8IWV8 1755 aa17.35■□□□□ 0.37
SRSF5-214ENST00000556436 CCER2I3L3R5 266 aa17.34■□□□□ 0.37
SRSF5-214ENST00000556436 TMPOP42166 694 aaKnown RBP17.34■□□□□ 0.37
SRSF5-214ENST00000556436 PROM2Q8N271 834 aa17.34■□□□□ 0.37
SRSF5-214ENST00000556436 NFATC2IPQ8NCF5 419 aa17.34■□□□□ 0.37
SRSF5-214ENST00000556436 ASAP1Q9ULH1 1129 aa17.34■□□□□ 0.37
SRSF5-214ENST00000556436 TAF1LQ8IZX4 1826 aa17.33■□□□□ 0.37
SRSF5-214ENST00000556436 FAM9BQ8IZU0 186 aa17.33■□□□□ 0.36
SRSF5-214ENST00000556436 THUMPD2Q9BTF0 503 aaKnown RBP17.33■□□□□ 0.36
SRSF5-214ENST00000556436 ATG3Q9NT62 314 aa17.33■□□□□ 0.36
SRSF5-214ENST00000556436 KCPQ6ZWJ8 1503 aa17.32■□□□□ 0.36
SRSF5-214ENST00000556436 SENP3-EIF4A1A0A087X0R7 540 aa17.32■□□□□ 0.36
SRSF5-214ENST00000556436 TXNRD1Q16881 649 aa17.32■□□□□ 0.36
SRSF5-214ENST00000556436 C5P01031 1676 aa17.32■□□□□ 0.36
SRSF5-214ENST00000556436 APAF1O14727 1248 aa17.31■□□□□ 0.36
SRSF5-214ENST00000556436 HTATSF1O43719 755 aaKnown RBP17.31■□□□□ 0.36
SRSF5-214ENST00000556436 KCNQ4P56696 695 aa17.31■□□□□ 0.36
SRSF5-214ENST00000556436 RIPK4P57078 832 aa17.31■□□□□ 0.36
SRSF5-214ENST00000556436 RTF1Q92541 710 aaKnown RBP17.31■□□□□ 0.36
SRSF5-214ENST00000556436 LRRC4BQ9NT99 713 aa17.31■□□□□ 0.36
SRSF5-214ENST00000556436 KDM3BQ7LBC6 1761 aa17.3■□□□□ 0.36
SRSF5-214ENST00000556436 TJP1Q07157 1748 aa17.3■□□□□ 0.36
SRSF5-214ENST00000556436 NEUROD2Q15784 382 aa17.3■□□□□ 0.36
SRSF5-214ENST00000556436 TRIM35Q9UPQ4 493 aa17.3■□□□□ 0.36
SRSF5-214ENST00000556436 TUBGCP6Q96RT7 1819 aa17.3■□□□□ 0.36
SRSF5-214ENST00000556436 ZNF831Q5JPB2 1677 aa17.29■□□□□ 0.36
SRSF5-214ENST00000556436 CICQ96RK0 1608 aaPredicted RBP17.29■□□□□ 0.36
SRSF5-214ENST00000556436 TEFQ10587 303 aa17.29■□□□□ 0.36
SRSF5-214ENST00000556436 SLC39A6Q13433 755 aa17.29■□□□□ 0.36
SRSF5-214ENST00000556436 COL5A3P25940 1745 aaPredicted RBP17.29■□□□□ 0.36
SRSF5-214ENST00000556436 SMARCC1Q92922 1105 aaPredicted RBP17.28■□□□□ 0.36
SRSF5-214ENST00000556436 ANO8Q9HCE9 1232 aaPredicted RBP17.28■□□□□ 0.36
SRSF5-214ENST00000556436 SLC4A9Q96Q91 983 aa17.27■□□□□ 0.36
SRSF5-214ENST00000556436 CCNL1Q9UK58 526 aaPredicted RBP17.27■□□□□ 0.36
SRSF5-214ENST00000556436 LOC102724428A0A0B4J2F2 783 aa17.26■□□□□ 0.35
SRSF5-214ENST00000556436 SIK1P57059 783 aa17.26■□□□□ 0.35
SRSF5-214ENST00000556436 C4BP0C0L5 1744 aa17.25■□□□□ 0.35
SRSF5-214ENST00000556436 KCNQ3O43525 872 aa17.25■□□□□ 0.35
SRSF5-214ENST00000556436 LMOD3Q0VAK6 560 aa17.25■□□□□ 0.35
SRSF5-214ENST00000556436 SLC27A3Q5K4L6 730 aa17.25■□□□□ 0.35
SRSF5-214ENST00000556436 PTCD1O75127 700 aaKnown RBP17.24■□□□□ 0.35
SRSF5-214ENST00000556436 ITPK1Q13572 414 aa17.24■□□□□ 0.35
SRSF5-214ENST00000556436 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
SRSF5-214ENST00000556436 MYH14Q7Z406 1995 aaKnown RBP17.23■□□□□ 0.35
SRSF5-214ENST00000556436 BTBD11A6QL63 1104 aa17.23■□□□□ 0.35
SRSF5-214ENST00000556436 ZNF827Q17R98 1081 aa17.23■□□□□ 0.35
SRSF5-214ENST00000556436 ZNF790Q6PG37 636 aa17.23■□□□□ 0.35
SRSF5-214ENST00000556436 MIS18AQ9NYP9 233 aa17.23■□□□□ 0.35
SRSF5-214ENST00000556436 UBR3Q6ZT12 1888 aa17.22■□□□□ 0.35
SRSF5-214ENST00000556436 QSER1Q2KHR3 1735 aa17.22■□□□□ 0.35
SRSF5-214ENST00000556436 TAF7Q15545 349 aaPredicted RBP17.22■□□□□ 0.35
SRSF5-214ENST00000556436 LINC00116Q8NCU8 138 aa17.22■□□□□ 0.35
SRSF5-214ENST00000556436 ZNF496Q96IT1 587 aaPredicted RBP17.21■□□□□ 0.35
SRSF5-214ENST00000556436 CASZ1Q86V15 1759 aa17.2■□□□□ 0.34
SRSF5-214ENST00000556436 ATP6V1AP38606 617 aa17.2■□□□□ 0.34
SRSF5-214ENST00000556436 TTC5Q8N0Z6 440 aa17.2■□□□□ 0.34
SRSF5-214ENST00000556436 AKT1S1Q96B36 256 aa17.2■□□□□ 0.34
SRSF5-214ENST00000556436 SALL2Q9Y467 1007 aaPredicted RBP17.2■□□□□ 0.34
SRSF5-214ENST00000556436 LAMB4A4D0S4 1761 aa17.2■□□□□ 0.34
SRSF5-214ENST00000556436 HEG1Q9ULI3 1381 aa17.19■□□□□ 0.34
SRSF5-214ENST00000556436 PSDA5PKW4 1024 aaPredicted RBP17.19■□□□□ 0.34
SRSF5-214ENST00000556436 R3HDM1Q15032 1099 aaKnown RBP17.19■□□□□ 0.34
SRSF5-214ENST00000556436 CCDC27Q2M243 656 aa17.18■□□□□ 0.34
SRSF5-214ENST00000556436 AMIGO3Q86WK7 504 aa17.18■□□□□ 0.34
SRSF5-214ENST00000556436 DNAJC10Q8IXB1 793 aa17.18■□□□□ 0.34
SRSF5-214ENST00000556436 WWC1Q8IX03 1113 aa17.17■□□□□ 0.34
SRSF5-214ENST00000556436 STK32BQ9NY57 414 aa17.17■□□□□ 0.34
SRSF5-214ENST00000556436 TSPYL4Q9UJ04 414 aa17.17■□□□□ 0.34
SRSF5-214ENST00000556436 PRAMEF22A3QJZ6 481 aa17.16■□□□□ 0.34
SRSF5-214ENST00000556436 SLC15A2Q16348 729 aa17.16■□□□□ 0.34
SRSF5-214ENST00000556436 NBPF14Q5TI25 921 aa17.16■□□□□ 0.34
SRSF5-214ENST00000556436 FMNL2Q96PY5 1086 aa17.16■□□□□ 0.34
SRSF5-214ENST00000556436 LAS1LQ9Y4W2 734 aaKnown RBP17.16■□□□□ 0.34
SRSF5-214ENST00000556436 CHL1O00533 1208 aa17.15■□□□□ 0.34
SRSF5-214ENST00000556436 ZNF853P0CG23 659 aa17.15■□□□□ 0.34
SRSF5-214ENST00000556436 EIF4A1P60842 406 aaKnown RBP17.15■□□□□ 0.34
SRSF5-214ENST00000556436 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
SRSF5-214ENST00000556436 SMIM5Q71RC9 77 aa17.15■□□□□ 0.34
SRSF5-214ENST00000556436 PDGFDQ9GZP0 370 aaPredicted RBP17.15■□□□□ 0.34
SRSF5-214ENST00000556436 C4AP0C0L4 1744 aa17.15■□□□□ 0.34
SRSF5-214ENST00000556436 CNTNAP4Q9C0A0 1308 aa17.15■□□□□ 0.34
SRSF5-214ENST00000556436 VSIG10Q8N0Z9 540 aa17.14■□□□□ 0.33
SRSF5-214ENST00000556436 PNPLA7Q6ZV29 1317 aa17.14■□□□□ 0.33
SRSF5-214ENST00000556436 ZNF521Q96K83 1311 aa17.14■□□□□ 0.33
SRSF5-214ENST00000556436 CYP19A1P11511 503 aaPredicted RBP17.13■□□□□ 0.33
SRSF5-214ENST00000556436 CRKLP46109 303 aaKnown RBP17.13■□□□□ 0.33
SRSF5-214ENST00000556436 KRT24Q2M2I5 525 aa17.13■□□□□ 0.33
SRSF5-214ENST00000556436 AK7Q96M32 723 aa17.13■□□□□ 0.33
SRSF5-214ENST00000556436 CFAP44Q96MT7 982 aa17.13■□□□□ 0.33
SRSF5-214ENST00000556436 MBIPQ9NS73 344 aa17.13■□□□□ 0.33
SRSF5-214ENST00000556436 IFT57Q9NWB7 429 aa17.13■□□□□ 0.33
SRSF5-214ENST00000556436 BABAM1Q9NWV8 329 aa17.13■□□□□ 0.33
SRSF5-214ENST00000556436 GNPATO15228 680 aa17.12■□□□□ 0.33
SRSF5-214ENST00000556436 INTS5Q6P9B9 1019 aaKnown RBP17.12■□□□□ 0.33
SRSF5-214ENST00000556436 CALD1Q05682 793 aaKnown RBP17.11■□□□□ 0.33
SRSF5-214ENST00000556436 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
SRSF5-214ENST00000556436 TFCP2L1Q9NZI6 479 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms