RNA–Protein interactions for RNA: ENST00000554945.1

SRP54-AS1-201, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-201ENST00000554945 PPM1GO15355 546 aaPredicted RBP13.02□□□□□ -0.33
SRP54-AS1-201ENST00000554945 MSL1Q68DK7 614 aa13.02□□□□□ -0.33
SRP54-AS1-201ENST00000554945 CD2APQ9Y5K6 639 aa13.02□□□□□ -0.33
SRP54-AS1-201ENST00000554945 NCAPD2Q15021 1401 aa13.02□□□□□ -0.33
SRP54-AS1-201ENST00000554945 SENP3-EIF4A1A0A087X0R7 540 aa13.01□□□□□ -0.33
SRP54-AS1-201ENST00000554945 YBX3P16989 372 aaKnown RBP eCLIP13.01□□□□□ -0.33
SRP54-AS1-201ENST00000554945 PIGBQ92521 554 aa13.01□□□□□ -0.33
SRP54-AS1-201ENST00000554945 AK7Q96M32 723 aa13.01□□□□□ -0.33
SRP54-AS1-201ENST00000554945 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.01□□□□□ -0.331e-12■□□□□ 8.4
SRP54-AS1-201ENST00000554945 UBR3Q6ZT12 1888 aa13.01□□□□□ -0.33
SRP54-AS1-201ENST00000554945 GIGYF1O75420 1035 aaPredicted RBP13□□□□□ -0.33
SRP54-AS1-201ENST00000554945 EYA1Q99502 592 aa13□□□□□ -0.33
SRP54-AS1-201ENST00000554945 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
SRP54-AS1-201ENST00000554945 SIK1P57059 783 aa12.98□□□□□ -0.33
SRP54-AS1-201ENST00000554945 IFNL2Q8IZJ0 200 aa12.98□□□□□ -0.33
SRP54-AS1-201ENST00000554945 TMOD3Q9NYL9 352 aa12.98□□□□□ -0.33
SRP54-AS1-201ENST00000554945 POLKQ9UBT6 870 aa12.98□□□□□ -0.33
SRP54-AS1-201ENST00000554945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.97□□□□□ -0.33
SRP54-AS1-201ENST00000554945 SSFA2P28290 1259 aa12.97□□□□□ -0.33
SRP54-AS1-201ENST00000554945 PLEKHG2Q9H7P9 1386 aa12.96□□□□□ -0.33
SRP54-AS1-201ENST00000554945 CLSPNQ9HAW4 1339 aa12.96□□□□□ -0.33
SRP54-AS1-201ENST00000554945 PHF14O94880 888 aa12.96□□□□□ -0.33
SRP54-AS1-201ENST00000554945 PHKG2P15735 406 aa12.96□□□□□ -0.33
SRP54-AS1-201ENST00000554945 AMIGO3Q86WK7 504 aa12.96□□□□□ -0.33
SRP54-AS1-201ENST00000554945 ATP6V1AP38606 617 aa12.95□□□□□ -0.34
SRP54-AS1-201ENST00000554945 LINC00116Q8NCU8 138 aa12.95□□□□□ -0.34
SRP54-AS1-201ENST00000554945 ASAP1Q9ULH1 1129 aa12.95□□□□□ -0.34
SRP54-AS1-201ENST00000554945 EIF4A2Q14240 407 aaKnown RBP12.94□□□□□ -0.34
SRP54-AS1-201ENST00000554945 POLR3GLQ9BT43 218 aa12.94□□□□□ -0.34
SRP54-AS1-201ENST00000554945 GNPATO15228 680 aa12.93□□□□□ -0.34
SRP54-AS1-201ENST00000554945 TNNT2P45379 298 aaPredicted RBP12.93□□□□□ -0.34
SRP54-AS1-201ENST00000554945 SMIM5Q71RC9 77 aa12.93□□□□□ -0.34
SRP54-AS1-201ENST00000554945 ATG3Q9NT62 314 aa12.93□□□□□ -0.34
SRP54-AS1-201ENST00000554945 IGSF1Q8N6C5 1336 aa12.92□□□□□ -0.34
SRP54-AS1-201ENST00000554945 ERVV-2B6SEH9 535 aa12.92□□□□□ -0.34
SRP54-AS1-201ENST00000554945 HSP90AB1P08238 724 aaKnown RBP12.92□□□□□ -0.34
SRP54-AS1-201ENST00000554945 ITPK1Q13572 414 aa12.92□□□□□ -0.34
SRP54-AS1-201ENST00000554945 ATP10DQ9P241 1426 aa12.92□□□□□ -0.34
SRP54-AS1-201ENST00000554945 ZNF831Q5JPB2 1677 aa12.92□□□□□ -0.34
SRP54-AS1-201ENST00000554945 DCAF5Q96JK2 942 aa12.91□□□□□ -0.34
SRP54-AS1-201ENST00000554945 GPBP1L1Q9HC44 474 aaPredicted RBP12.91□□□□□ -0.34
SRP54-AS1-201ENST00000554945 EIF4G2P78344 907 aaKnown RBP eCLIP12.9□□□□□ -0.34
SRP54-AS1-201ENST00000554945 PLEKHO1Q53GL0 409 aaPredicted RBP12.9□□□□□ -0.34
SRP54-AS1-201ENST00000554945 TRAPPC3LQ5T215 181 aa12.9□□□□□ -0.34
SRP54-AS1-201ENST00000554945 RTCBQ9Y3I0 505 aaKnown RBP12.9□□□□□ -0.34
SRP54-AS1-201ENST00000554945 AMOTQ4VCS5 1084 aa12.89□□□□□ -0.35
SRP54-AS1-201ENST00000554945 RC3H1Q5TC82 1133 aaKnown RBP12.89□□□□□ -0.35
SRP54-AS1-201ENST00000554945 NLGN1Q8N2Q7 840 aa12.89□□□□□ -0.35
SRP54-AS1-201ENST00000554945 PANK3Q9H999 370 aa12.89□□□□□ -0.35
SRP54-AS1-201ENST00000554945 KIF13BQ9NQT8 1826 aa12.89□□□□□ -0.35
SRP54-AS1-201ENST00000554945 ADCY9O60503 1353 aa12.89□□□□□ -0.35
SRP54-AS1-201ENST00000554945 KDRP35968 1356 aa12.89□□□□□ -0.35
SRP54-AS1-201ENST00000554945 COL5A3P25940 1745 aaPredicted RBP12.88□□□□□ -0.35
SRP54-AS1-201ENST00000554945 CEP350Q5VT06 3117 aa12.88□□□□□ -0.35
SRP54-AS1-201ENST00000554945 MMP10P09238 476 aa12.88□□□□□ -0.35
SRP54-AS1-201ENST00000554945 PCGF6Q9BYE7 350 aa12.88□□□□□ -0.35
SRP54-AS1-201ENST00000554945 RPS6KA4O75676 772 aa12.87□□□□□ -0.35
SRP54-AS1-201ENST00000554945 HSPA5P11021 654 aaKnown RBP12.87□□□□□ -0.35
SRP54-AS1-201ENST00000554945 CABP4P57796 275 aa12.87□□□□□ -0.35
SRP54-AS1-201ENST00000554945 TGFB2P61812 414 aa12.87□□□□□ -0.35
SRP54-AS1-201ENST00000554945 ZNF530Q6P9A1 599 aaPredicted RBP12.87□□□□□ -0.35
SRP54-AS1-201ENST00000554945 SLC4A9Q96Q91 983 aa12.87□□□□□ -0.35
SRP54-AS1-201ENST00000554945 WWC3Q9ULE0 1092 aa12.87□□□□□ -0.35
SRP54-AS1-201ENST00000554945 RFC4P35249 363 aa12.86□□□□□ -0.35
SRP54-AS1-201ENST00000554945 MTHFSP49914 203 aa12.86□□□□□ -0.35
SRP54-AS1-201ENST00000554945 C1orf141Q5JVX7 400 aa12.86□□□□□ -0.35
SRP54-AS1-201ENST00000554945 MORC1Q86VD1 984 aa12.86□□□□□ -0.35
SRP54-AS1-201ENST00000554945 ARHGEF1Q92888 912 aaKnown RBP12.86□□□□□ -0.35
SRP54-AS1-201ENST00000554945 N4BP2Q86UW6 1770 aaPredicted RBP12.86□□□□□ -0.35
SRP54-AS1-201ENST00000554945 CNTNAP4Q9C0A0 1308 aa12.86□□□□□ -0.35
SRP54-AS1-201ENST00000554945 KIAA1551Q9HCM1 1747 aa12.85□□□□□ -0.35
SRP54-AS1-201ENST00000554945 CICQ96RK0 1608 aaPredicted RBP12.85□□□□□ -0.35
SRP54-AS1-201ENST00000554945 PRKAR2AP13861 404 aaKnown RBP12.85□□□□□ -0.35
SRP54-AS1-201ENST00000554945 ZNF526Q8TF50 670 aaPredicted RBP12.85□□□□□ -0.35
SRP54-AS1-201ENST00000554945 KDM6AO15550 1401 aaPredicted RBP12.85□□□□□ -0.35
SRP54-AS1-201ENST00000554945 MYH14Q7Z406 1995 aaKnown RBP12.85□□□□□ -0.35
SRP54-AS1-201ENST00000554945 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
SRP54-AS1-201ENST00000554945 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
SRP54-AS1-201ENST00000554945 GYS1P13807 737 aa12.84□□□□□ -0.35
SRP54-AS1-201ENST00000554945 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
SRP54-AS1-201ENST00000554945 CCDC87Q9NVE4 849 aa12.84□□□□□ -0.35
SRP54-AS1-201ENST00000554945 PARP3Q9Y6F1 533 aa12.84□□□□□ -0.35
SRP54-AS1-201ENST00000554945 C4AP0C0L4 1744 aa12.84□□□□□ -0.35
SRP54-AS1-201ENST00000554945 PXDNLA1KZ92 1463 aa12.84□□□□□ -0.35
SRP54-AS1-201ENST00000554945 PTCD1O75127 700 aaKnown RBP12.83□□□□□ -0.36
SRP54-AS1-201ENST00000554945 NFATC2IPQ8NCF5 419 aa12.83□□□□□ -0.36
SRP54-AS1-201ENST00000554945 KNSTRNQ9Y448 316 aa12.83□□□□□ -0.36
SRP54-AS1-201ENST00000554945 SCN11AQ9UI33 1791 aa12.82□□□□□ -0.36
SRP54-AS1-201ENST00000554945 C10orf71Q711Q0 1435 aa12.82□□□□□ -0.36
SRP54-AS1-201ENST00000554945 A0A0G2JLW4 131 aa12.82□□□□□ -0.36
SRP54-AS1-201ENST00000554945 HSPA6P17066 643 aa12.82□□□□□ -0.36
SRP54-AS1-201ENST00000554945 SULT6B1Q6IMI4 303 aa12.82□□□□□ -0.36
SRP54-AS1-201ENST00000554945 AEBP1Q8IUX7 1158 aa12.82□□□□□ -0.36
SRP54-AS1-201ENST00000554945 BCS1LQ9Y276 419 aa12.82□□□□□ -0.36
SRP54-AS1-201ENST00000554945 BRCA1P38398 1863 aaKnown RBP12.82□□□□□ -0.36
SRP54-AS1-201ENST00000554945 CRKLP46109 303 aaKnown RBP12.81□□□□□ -0.36
SRP54-AS1-201ENST00000554945 KIF3CO14782 793 aa12.8□□□□□ -0.36
SRP54-AS1-201ENST00000554945 DPEP1P16444 411 aa12.8□□□□□ -0.36
SRP54-AS1-201ENST00000554945 IL13P35225 146 aa12.8□□□□□ -0.36
SRP54-AS1-201ENST00000554945 ARHGAP27Q6ZUM4 889 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms