RNA–Protein interactions for RNA: ENST00000553699.5

GSKIP-202, Transcript of GSK3B interacting protein, humanhuman

TSL 4

Gene GSKIP, Length 501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-202ENST00000553699 LRRC4BQ9NT99 713 aa13.06□□□□□ -0.32
GSKIP-202ENST00000553699 COL24A1Q17RW2 1714 aa13.05□□□□□ -0.32
GSKIP-202ENST00000553699 QSER1Q2KHR3 1735 aa13.05□□□□□ -0.32
GSKIP-202ENST00000553699 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
GSKIP-202ENST00000553699 NKX1-1Q15270 411 aaPredicted RBP13.04□□□□□ -0.32
GSKIP-202ENST00000553699 CCNL1Q9UK58 526 aaPredicted RBP13.04□□□□□ -0.32
GSKIP-202ENST00000553699 PNPLA7Q6ZV29 1317 aa13.04□□□□□ -0.32
GSKIP-202ENST00000553699 PALLDQ8WX93 1383 aa13.04□□□□□ -0.32
GSKIP-202ENST00000553699 FOXN1O15353 648 aa13.03□□□□□ -0.32
GSKIP-202ENST00000553699 PER1O15534 1290 aaPredicted RBP13.03□□□□□ -0.32
GSKIP-202ENST00000553699 MPRIPQ6WCQ1 1025 aa13.03□□□□□ -0.32
GSKIP-202ENST00000553699 IFNL2Q8IZJ0 200 aa13.03□□□□□ -0.32
GSKIP-202ENST00000553699 NPC1L1Q9UHC9 1359 aa13.03□□□□□ -0.32
GSKIP-202ENST00000553699 C5P01031 1676 aa13.02□□□□□ -0.32
GSKIP-202ENST00000553699 ITGB4P16144 1822 aa13.02□□□□□ -0.32
GSKIP-202ENST00000553699 KAT6BQ8WYB5 2073 aa13.02□□□□□ -0.33
GSKIP-202ENST00000553699 CCDC85CA6NKD9 419 aa13.02□□□□□ -0.33
GSKIP-202ENST00000553699 PHKG2P15735 406 aa13.02□□□□□ -0.33
GSKIP-202ENST00000553699 HMGB2P26583 209 aaKnown RBP13.02□□□□□ -0.33
GSKIP-202ENST00000553699 SMC1BQ8NDV3 1235 aa13.02□□□□□ -0.33
GSKIP-202ENST00000553699 TFCP2L1Q9NZI6 479 aa13.02□□□□□ -0.33
GSKIP-202ENST00000553699 CTCFP49711 727 aaPredicted RBP13.01□□□□□ -0.33
GSKIP-202ENST00000553699 KCNQ4P56696 695 aa13.01□□□□□ -0.33
GSKIP-202ENST00000553699 SMARCC1Q92922 1105 aaPredicted RBP13.01□□□□□ -0.33
GSKIP-202ENST00000553699 KDRP35968 1356 aa13.01□□□□□ -0.33
GSKIP-202ENST00000553699 TUBGCP6Q96RT7 1819 aa13□□□□□ -0.33
GSKIP-202ENST00000553699 AMOTQ4VCS5 1084 aa13□□□□□ -0.33
GSKIP-202ENST00000553699 PLEKHO1Q53GL0 409 aaPredicted RBP13□□□□□ -0.33
GSKIP-202ENST00000553699 CC2D1BQ5T0F9 858 aaKnown RBP13□□□□□ -0.33
GSKIP-202ENST00000553699 TMOD3Q9NYL9 352 aa13□□□□□ -0.33
GSKIP-202ENST00000553699 HSP90AB1P08238 724 aaKnown RBP12.99□□□□□ -0.33
GSKIP-202ENST00000553699 IL13P35225 146 aa12.99□□□□□ -0.33
GSKIP-202ENST00000553699 MTHFSP49914 203 aa12.99□□□□□ -0.33
GSKIP-202ENST00000553699 PIGBQ92521 554 aa12.99□□□□□ -0.33
GSKIP-202ENST00000553699 SULT6B1Q6IMI4 303 aa12.98□□□□□ -0.33
GSKIP-202ENST00000553699 ZNF530Q6P9A1 599 aaPredicted RBP12.98□□□□□ -0.33
GSKIP-202ENST00000553699 AEBP1Q8IUX7 1158 aa12.98□□□□□ -0.33
GSKIP-202ENST00000553699 TAF1LQ8IZX4 1826 aa12.97□□□□□ -0.33
GSKIP-202ENST00000553699 C4BP0C0L5 1744 aa12.97□□□□□ -0.33
GSKIP-202ENST00000553699 C1orf141Q5JVX7 400 aa12.97□□□□□ -0.33
GSKIP-202ENST00000553699 AIDAQ96BJ3 306 aa12.97□□□□□ -0.33
GSKIP-202ENST00000553699 DCAF5Q96JK2 942 aa12.97□□□□□ -0.33
GSKIP-202ENST00000553699 KDM6AO15550 1401 aaPredicted RBP12.96□□□□□ -0.33
GSKIP-202ENST00000553699 MSH5O43196 834 aa12.96□□□□□ -0.33
GSKIP-202ENST00000553699 ERVV-2B6SEH9 535 aa12.95□□□□□ -0.34
GSKIP-202ENST00000553699 DIAPH1O60610 1272 aaKnown RBP12.95□□□□□ -0.34
GSKIP-202ENST00000553699 COL3A1P02461 1466 aaPredicted RBP12.95□□□□□ -0.34
GSKIP-202ENST00000553699 KDM2BQ8NHM5 1336 aa12.94□□□□□ -0.34
GSKIP-202ENST00000553699 LOC102724428A0A0B4J2F2 783 aa12.94□□□□□ -0.34
GSKIP-202ENST00000553699 SIK1P57059 783 aa12.94□□□□□ -0.34
GSKIP-202ENST00000553699 CNGB1Q14028 1251 aaPredicted RBP12.94□□□□□ -0.34
GSKIP-202ENST00000553699 FLAD1Q8NFF5 587 aa12.94□□□□□ -0.34
GSKIP-202ENST00000553699 RRAGCQ9HB90 399 aa12.94□□□□□ -0.34
GSKIP-202ENST00000553699 ASAP1Q9ULH1 1129 aa12.94□□□□□ -0.34
GSKIP-202ENST00000553699 ZNF831Q5JPB2 1677 aa12.93□□□□□ -0.34
GSKIP-202ENST00000553699 LBX1P52954 281 aa12.93□□□□□ -0.34
GSKIP-202ENST00000553699 AK7Q96M32 723 aa12.93□□□□□ -0.34
GSKIP-202ENST00000553699 ATG3Q9NT62 314 aa12.93□□□□□ -0.34
GSKIP-202ENST00000553699 C10orf71Q711Q0 1435 aa12.93□□□□□ -0.34
GSKIP-202ENST00000553699 HMOX1P09601 288 aa12.92□□□□□ -0.34
GSKIP-202ENST00000553699 CABP4P57796 275 aa12.92□□□□□ -0.34
GSKIP-202ENST00000553699 MSL1Q68DK7 614 aa12.92□□□□□ -0.34
GSKIP-202ENST00000553699 COL23A1Q86Y22 540 aaPredicted RBP12.92□□□□□ -0.34
GSKIP-202ENST00000553699 ATP6V1AP38606 617 aa12.91□□□□□ -0.34
GSKIP-202ENST00000553699 AKAP4Q5JQC9 854 aa12.91□□□□□ -0.34
GSKIP-202ENST00000553699 SCN11AQ9UI33 1791 aa12.91□□□□□ -0.34
GSKIP-202ENST00000553699 UBR3Q6ZT12 1888 aa12.91□□□□□ -0.34
GSKIP-202ENST00000553699 MRC1P22897 1456 aa12.91□□□□□ -0.34
GSKIP-202ENST00000553699 SSFA2P28290 1259 aa12.9□□□□□ -0.34
GSKIP-202ENST00000553699 ITPK1Q13572 414 aa12.9□□□□□ -0.34
GSKIP-202ENST00000553699 LINC00116Q8NCU8 138 aa12.9□□□□□ -0.34
GSKIP-202ENST00000553699 CFAP53Q96M91 514 aa12.9□□□□□ -0.34
GSKIP-202ENST00000553699 ADAMTS7Q9UKP4 1686 aa12.89□□□□□ -0.35
GSKIP-202ENST00000553699 CICQ96RK0 1608 aaPredicted RBP12.89□□□□□ -0.35
GSKIP-202ENST00000553699 COL5A3P25940 1745 aaPredicted RBP12.89□□□□□ -0.35
GSKIP-202ENST00000553699 U2SURPO15042 1029 aaKnown RBP12.89□□□□□ -0.35
GSKIP-202ENST00000553699 PHF14O94880 888 aa12.89□□□□□ -0.35
GSKIP-202ENST00000553699 ARHGAP27Q6ZUM4 889 aa12.89□□□□□ -0.35
GSKIP-202ENST00000553699 MKRN1Q9UHC7 482 aaKnown RBP12.89□□□□□ -0.35
GSKIP-202ENST00000553699 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.88□□□□□ -0.35
GSKIP-202ENST00000553699 GNPATO15228 680 aa12.88□□□□□ -0.35
GSKIP-202ENST00000553699 NFATC2IPQ8NCF5 419 aa12.88□□□□□ -0.35
GSKIP-202ENST00000553699 CFAP44Q96MT7 982 aa12.88□□□□□ -0.35
GSKIP-202ENST00000553699 RBM42Q9BTD8 480 aaKnown RBP12.88□□□□□ -0.35
GSKIP-202ENST00000553699 PDE4DIPQ5VU43 2346 aa12.88□□□□□ -0.35
GSKIP-202ENST00000553699 C9orf131Q5VYM1 1079 aa12.87□□□□□ -0.35
GSKIP-202ENST00000553699 PXDNLA1KZ92 1463 aa12.86□□□□□ -0.35
GSKIP-202ENST00000553699 TNRC18O15417 2968 aaPredicted RBP12.86□□□□□ -0.35
GSKIP-202ENST00000553699 PPP2R1AP30153 589 aa12.86□□□□□ -0.35
GSKIP-202ENST00000553699 MTHFSDQ2M296 383 aaKnown RBP12.86□□□□□ -0.35
GSKIP-202ENST00000553699 PRPF38BQ5VTL8 546 aaKnown RBP12.86□□□□□ -0.35
GSKIP-202ENST00000553699 AMIGO3Q86WK7 504 aa12.86□□□□□ -0.35
GSKIP-202ENST00000553699 SLC4A9Q96Q91 983 aa12.86□□□□□ -0.35
GSKIP-202ENST00000553699 SLC52A2Q9HAB3 445 aa12.86□□□□□ -0.35
GSKIP-202ENST00000553699 NUDCQ9Y266 331 aa12.86□□□□□ -0.35
GSKIP-202ENST00000553699 CNTNAP4Q9C0A0 1308 aa12.86□□□□□ -0.35
GSKIP-202ENST00000553699 TJP1Q07157 1748 aa12.85□□□□□ -0.35
GSKIP-202ENST00000553699 RNMTO43148 476 aaKnown RBP12.85□□□□□ -0.35
GSKIP-202ENST00000553699 PTCD1O75127 700 aaKnown RBP12.85□□□□□ -0.35
GSKIP-202ENST00000553699 RC3H1Q5TC82 1133 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms