RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 PATL2C9JE40 543 aaKnown RBP5.22□□□□□ -1.57
RDH11-204ENST00000553578 TICAM2Q86XR7 235 aa5.22□□□□□ -1.57
RDH11-204ENST00000553578 WBP1LQ9NX94 342 aa5.22□□□□□ -1.57
RDH11-204ENST00000553578 NRXN3Q9Y4C0 1643 aa5.22□□□□□ -1.57
RDH11-204ENST00000553578 PIK3C2GO75747 1445 aa5.22□□□□□ -1.57
RDH11-204ENST00000553578 TMX4Q9H1E5 349 aaPredicted RBP5.22□□□□□ -1.57
RDH11-204ENST00000553578 TONSLQ96HA7 1378 aa5.22□□□□□ -1.57
RDH11-204ENST00000553578 ZNF142P52746 1687 aaPredicted RBP5.22□□□□□ -1.57
RDH11-204ENST00000553578 PROSER2Q86WR7 435 aaPredicted RBP5.21□□□□□ -1.57
RDH11-204ENST00000553578 POM121Q96HA1 1249 aa5.21□□□□□ -1.57
RDH11-204ENST00000553578 TRAK2O60296 914 aa5.21□□□□□ -1.58
RDH11-204ENST00000553578 ERVK-7P63135 1459 aa5.21□□□□□ -1.58
RDH11-204ENST00000553578 ADGRB2O60241 1585 aa5.21□□□□□ -1.58
RDH11-204ENST00000553578 WASHC2AQ641Q2 1341 aa5.21□□□□□ -1.58
RDH11-204ENST00000553578 WASHC2CQ9Y4E1 1318 aa5.21□□□□□ -1.58
RDH11-204ENST00000553578 VGLL3A8MV65 326 aa5.2□□□□□ -1.58
RDH11-204ENST00000553578 TRIM66O15016 1216 aa5.2□□□□□ -1.58
RDH11-204ENST00000553578 TEX2Q8IWB9 1127 aa5.2□□□□□ -1.58
RDH11-204ENST00000553578 GDPD2Q9HCC8 539 aa5.2□□□□□ -1.58
RDH11-204ENST00000553578 CCDC7Q96M83 1385 aa5.2□□□□□ -1.58
RDH11-204ENST00000553578 C11orf95C9JLR9 678 aaPredicted RBP5.2□□□□□ -1.58
RDH11-204ENST00000553578 CFHP08603 1231 aa5.2□□□□□ -1.58
RDH11-204ENST00000553578 CC2D2BQ6DHV5 1058 aa5.2□□□□□ -1.58
RDH11-204ENST00000553578 FAM43AQ8N2R8 423 aa5.2□□□□□ -1.58
RDH11-204ENST00000553578 NPATQ14207 1427 aa5.2□□□□□ -1.58
RDH11-204ENST00000553578 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.2□□□□□ -1.58
RDH11-204ENST00000553578 TSPY4P0CV99 314 aa5.2□□□□□ -1.58
RDH11-204ENST00000553578 TSPY10P0CW01 314 aa5.2□□□□□ -1.58
RDH11-204ENST00000553578 GRIPAP1Q4V328 841 aa5.2□□□□□ -1.58
RDH11-204ENST00000553578 LAS1LQ9Y4W2 734 aaKnown RBP5.2□□□□□ -1.58
RDH11-204ENST00000553578 LRRC7Q96NW7 1537 aa5.19□□□□□ -1.58
RDH11-204ENST00000553578 CCDC144AA2RUR9 1427 aa5.19□□□□□ -1.58
RDH11-204ENST00000553578 PTMSP20962 102 aa5.19□□□□□ -1.58
RDH11-204ENST00000553578 NUTM1Q86Y26 1132 aa5.19□□□□□ -1.58
RDH11-204ENST00000553578 SIN3AQ96ST3 1273 aa5.19□□□□□ -1.58
RDH11-204ENST00000553578 PHOX2BQ99453 314 aa5.19□□□□□ -1.58
RDH11-204ENST00000553578 UBR1Q8IWV7 1749 aa5.19□□□□□ -1.58
RDH11-204ENST00000553578 RPGRIP1LQ68CZ1 1315 aa5.19□□□□□ -1.58
RDH11-204ENST00000553578 MYO5BQ9ULV0 1848 aa5.19□□□□□ -1.58
RDH11-204ENST00000553578 ASXL1Q8IXJ9 1541 aa5.19□□□□□ -1.58
RDH11-204ENST00000553578 ANKRD62A6NC57 917 aa5.19□□□□□ -1.58
RDH11-204ENST00000553578 NBPF8Q3BBV2 869 aa5.19□□□□□ -1.58
RDH11-204ENST00000553578 L3MBTL2Q969R5 705 aa5.19□□□□□ -1.58
RDH11-204ENST00000553578 PNNQ9H307 717 aaKnown RBP5.19□□□□□ -1.58
RDH11-204ENST00000553578 PCDHB3Q9Y5E6 796 aa5.19□□□□□ -1.58
RDH11-204ENST00000553578 TOPAZ1Q8N9V7 1692 aa5.18□□□□□ -1.58
RDH11-204ENST00000553578 QRICH2Q9H0J4 1663 aa5.18□□□□□ -1.58
RDH11-204ENST00000553578 SCAF11Q99590 1463 aaKnown RBP5.18□□□□□ -1.58
RDH11-204ENST00000553578 APPP05067 770 aa5.18□□□□□ -1.58
RDH11-204ENST00000553578 AMHR2Q16671 573 aa5.18□□□□□ -1.58
RDH11-204ENST00000553578 DIP2AQ14689 1571 aa5.18□□□□□ -1.58
RDH11-204ENST00000553578 HNRNPMP52272 730 aaKnown RBP eCLIP5.18□□□□□ -1.58
RDH11-204ENST00000553578 CALD1Q05682 793 aaKnown RBP5.18□□□□□ -1.58
RDH11-204ENST00000553578 MED14O60244 1454 aa5.18□□□□□ -1.58
RDH11-204ENST00000553578 SSTR3P32745 418 aaPredicted RBP5.18□□□□□ -1.58
RDH11-204ENST00000553578 RRP7BPQ9NSQ0 103 aa5.18□□□□□ -1.58
RDH11-204ENST00000553578 AXDND1Q5T1B0 1012 aaPredicted RBP5.17□□□□□ -1.58
RDH11-204ENST00000553578 GIGYF2Q6Y7W6 1299 aaKnown RBP5.17□□□□□ -1.58
RDH11-204ENST00000553578 ZHX1Q9UKY1 873 aaPredicted RBP5.17□□□□□ -1.58
RDH11-204ENST00000553578 CPS1P31327 1500 aa5.17□□□□□ -1.58
RDH11-204ENST00000553578 CCDC85CA6NKD9 419 aa5.17□□□□□ -1.58
RDH11-204ENST00000553578 TECPR2O15040 1411 aa5.17□□□□□ -1.58
RDH11-204ENST00000553578 ABL1P00519 1130 aa5.17□□□□□ -1.58
RDH11-204ENST00000553578 LRPPRCP42704 1394 aaKnown RBP5.17□□□□□ -1.58
RDH11-204ENST00000553578 TMC1Q8TDI8 760 aa5.17□□□□□ -1.58
RDH11-204ENST00000553578 SLIT1O75093 1534 aa5.17□□□□□ -1.58
RDH11-204ENST00000553578 NUTM2BA6NNL0 878 aaPredicted RBP5.17□□□□□ -1.58
RDH11-204ENST00000553578 NUTM2EB1AL46 878 aaPredicted RBP5.17□□□□□ -1.58
RDH11-204ENST00000553578 NUTM2DQ5VT03 806 aaPredicted RBP5.17□□□□□ -1.58
RDH11-204ENST00000553578 NUTM2AQ8IVF1 878 aaPredicted RBP5.17□□□□□ -1.58
RDH11-204ENST00000553578 SPAG9O60271 1321 aaKnown RBP5.16□□□□□ -1.58
RDH11-204ENST00000553578 PRM3Q9NNZ6 103 aa5.16□□□□□ -1.58
RDH11-204ENST00000553578 TNNT2P45379 298 aaPredicted RBP5.16□□□□□ -1.58
RDH11-204ENST00000553578 ANP32BQ92688 251 aaKnown RBP5.16□□□□□ -1.58
RDH11-204ENST00000553578 FAM217BQ9NTX9 383 aaPredicted RBP5.16□□□□□ -1.58
RDH11-204ENST00000553578 PARD3Q8TEW0 1356 aa5.16□□□□□ -1.58
RDH11-204ENST00000553578 SLC10A3P09131 477 aa5.16□□□□□ -1.58
RDH11-204ENST00000553578 PARP9Q8IXQ6 854 aa5.16□□□□□ -1.58
RDH11-204ENST00000553578 CDC42BPGQ6DT37 1551 aa5.16□□□□□ -1.58
RDH11-204ENST00000553578 NRKQ7Z2Y5 1582 aa5.15□□□□□ -1.58
RDH11-204ENST00000553578 APLP1P51693 650 aa5.15□□□□□ -1.58
RDH11-204ENST00000553578 COPS2P61201 443 aa5.15□□□□□ -1.58
RDH11-204ENST00000553578 KCNC4Q03721 635 aa5.15□□□□□ -1.58
RDH11-204ENST00000553578 DIXDC1Q155Q3 683 aa5.15□□□□□ -1.58
RDH11-204ENST00000553578 GIPC2Q8TF65 315 aa5.15□□□□□ -1.58
RDH11-204ENST00000553578 ARHGAP23Q9P227 1491 aa5.15□□□□□ -1.58
RDH11-204ENST00000553578 ADAMTSL3P82987 1691 aa5.15□□□□□ -1.58
RDH11-204ENST00000553578 ACTN4O43707 911 aaKnown RBP5.15□□□□□ -1.58
RDH11-204ENST00000553578 NR1I2O75469 434 aa5.15□□□□□ -1.58
RDH11-204ENST00000553578 C9orf131Q5VYM1 1079 aa5.15□□□□□ -1.58
RDH11-204ENST00000553578 DNAJC2Q99543 621 aaKnown RBP5.15□□□□□ -1.58
RDH11-204ENST00000553578 SHPRHQ149N8 1683 aa5.15□□□□□ -1.58
RDH11-204ENST00000553578 AKAP12Q02952 1782 aa5.15□□□□□ -1.59
RDH11-204ENST00000553578 USP47Q96K76 1375 aa5.15□□□□□ -1.59
RDH11-204ENST00000553578 FAM193AP78312 1265 aa5.15□□□□□ -1.59
RDH11-204ENST00000553578 TSNAXIP1Q2TAA8 658 aa5.15□□□□□ -1.59
RDH11-204ENST00000553578 TESK2Q96S53 571 aa5.15□□□□□ -1.59
RDH11-204ENST00000553578 HIRIP3Q9BW71 556 aaPredicted RBP5.15□□□□□ -1.59
RDH11-204ENST00000553578 IL21Q9HBE4 155 aa5.15□□□□□ -1.59
RDH11-204ENST00000553578 PRDM4Q9UKN5 801 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms