RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 BTBD11A6QL63 1104 aa17.72■□□□□ 0.43
APEX1-205ENST00000553555 ELL2O00472 640 aaPredicted RBP17.72■□□□□ 0.43
APEX1-205ENST00000553555 SLC52A2Q9HAB3 445 aa17.72■□□□□ 0.43
APEX1-205ENST00000553555 PLIN1O60240 522 aa17.71■□□□□ 0.43
APEX1-205ENST00000553555 KRT24Q2M2I5 525 aa17.71■□□□□ 0.43
APEX1-205ENST00000553555 ALDH1L2Q3SY69 923 aa17.71■□□□□ 0.43
APEX1-205ENST00000553555 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.71■□□□□ 0.43
APEX1-205ENST00000553555 MRC1P22897 1456 aa17.71■□□□□ 0.43
APEX1-205ENST00000553555 AFF2P51816 1311 aa17.7■□□□□ 0.42
APEX1-205ENST00000553555 SSH1Q8WYL5 1049 aa17.7■□□□□ 0.42
APEX1-205ENST00000553555 NFATC2IPQ8NCF5 419 aa17.69■□□□□ 0.42
APEX1-205ENST00000553555 CACNA1FO60840 1977 aa17.69■□□□□ 0.42
APEX1-205ENST00000553555 ERVV-2B6SEH9 535 aa17.69■□□□□ 0.42
APEX1-205ENST00000553555 BCL2L13Q9BXK5 485 aa17.69■□□□□ 0.42
APEX1-205ENST00000553555 TNS2Q63HR2 1409 aa17.68■□□□□ 0.42
APEX1-205ENST00000553555 ITGB4P16144 1822 aa17.68■□□□□ 0.42
APEX1-205ENST00000553555 KCNQ3O43525 872 aa17.68■□□□□ 0.42
APEX1-205ENST00000553555 EIF4A1P60842 406 aaKnown RBP17.68■□□□□ 0.42
APEX1-205ENST00000553555 DDB1Q16531 1140 aa17.68■□□□□ 0.42
APEX1-205ENST00000553555 SMC4Q9NTJ3 1288 aa17.68■□□□□ 0.42
APEX1-205ENST00000553555 TOGARAM1Q9Y4F4 1720 aa17.68■□□□□ 0.42
APEX1-205ENST00000553555 CABP4P57796 275 aa17.67■□□□□ 0.42
APEX1-205ENST00000553555 FBXO41Q8TF61 875 aa17.67■□□□□ 0.42
APEX1-205ENST00000553555 SOS1Q07889 1333 aaPredicted RBP17.67■□□□□ 0.42
APEX1-205ENST00000553555 BRPF1P55201 1214 aaPredicted RBP17.66■□□□□ 0.42
APEX1-205ENST00000553555 FAM98CQ17RN3 349 aaKnown RBP17.66■□□□□ 0.42
APEX1-205ENST00000553555 ERICH6BQ5W0A0 696 aa17.66■□□□□ 0.42
APEX1-205ENST00000553555 MRPL50Q8N5N7 158 aaKnown RBP17.65■□□□□ 0.42
APEX1-205ENST00000553555 ATRNO75882 1429 aa17.65■□□□□ 0.42
APEX1-205ENST00000553555 FRAT1Q92837 279 aaPredicted RBP17.65■□□□□ 0.42
APEX1-205ENST00000553555 GJD4Q96KN9 370 aaPredicted RBP17.65■□□□□ 0.42
APEX1-205ENST00000553555 TRPC5Q9UL62 973 aaPredicted RBP17.65■□□□□ 0.42
APEX1-205ENST00000553555 GLI3P10071 1580 aa17.64■□□□□ 0.42
APEX1-205ENST00000553555 ZNF790Q6PG37 636 aa17.64■□□□□ 0.41
APEX1-205ENST00000553555 HEG1Q9ULI3 1381 aa17.64■□□□□ 0.41
APEX1-205ENST00000553555 SLC39A6Q13433 755 aa17.63■□□□□ 0.41
APEX1-205ENST00000553555 C20orf194Q5TEA3 1177 aa17.63■□□□□ 0.41
APEX1-205ENST00000553555 THSD7AQ9UPZ6 1657 aa17.62■□□□□ 0.41
APEX1-205ENST00000553555 TCERG1O14776 1098 aaKnown RBP17.62■□□□□ 0.41
APEX1-205ENST00000553555 HOXB7P09629 217 aa17.62■□□□□ 0.41
APEX1-205ENST00000553555 CANXP27824 592 aaKnown RBP17.62■□□□□ 0.41
APEX1-205ENST00000553555 MARCH10Q8NA82 808 aaPredicted RBP17.62■□□□□ 0.41
APEX1-205ENST00000553555 NOB1Q9ULX3 412 aaKnown RBP17.62■□□□□ 0.41
APEX1-205ENST00000553555 PDE3AQ14432 1141 aa17.61■□□□□ 0.41
APEX1-205ENST00000553555 ZKSCAN2Q63HK3 967 aa17.61■□□□□ 0.41
APEX1-205ENST00000553555 PAPPAQ13219 1627 aa17.61■□□□□ 0.41
APEX1-205ENST00000553555 UBR2Q8IWV8 1755 aa17.61■□□□□ 0.41
APEX1-205ENST00000553555 KIF16BQ96L93 1317 aa17.61■□□□□ 0.41
APEX1-205ENST00000553555 QTRT2Q9H974 415 aaKnown RBP17.61■□□□□ 0.41
APEX1-205ENST00000553555 DOT1LQ8TEK3 1739 aa17.6■□□□□ 0.41
APEX1-205ENST00000553555 IPO8O15397 1037 aaKnown RBP17.6■□□□□ 0.41
APEX1-205ENST00000553555 CCDC30Q5VVM6 783 aa17.6■□□□□ 0.41
APEX1-205ENST00000553555 TTC5Q8N0Z6 440 aa17.6■□□□□ 0.41
APEX1-205ENST00000553555 ONECUT3O60422 494 aaPredicted RBP17.59■□□□□ 0.41
APEX1-205ENST00000553555 GIGYF1O75420 1035 aaPredicted RBP17.59■□□□□ 0.41
APEX1-205ENST00000553555 EXOC6Q8TAG9 804 aa17.59■□□□□ 0.41
APEX1-205ENST00000553555 CRBNQ96SW2 442 aa17.59■□□□□ 0.41
APEX1-205ENST00000553555 CHMP4AQ9BY43 222 aa17.59■□□□□ 0.41
APEX1-205ENST00000553555 TMOD3Q9NYL9 352 aa17.59■□□□□ 0.41
APEX1-205ENST00000553555 ATF7IPQ6VMQ6 1270 aa17.58■□□□□ 0.41
APEX1-205ENST00000553555 ARHGAP45Q92619 1136 aa17.58■□□□□ 0.41
APEX1-205ENST00000553555 TNNQ9UQP3 1299 aa17.58■□□□□ 0.41
APEX1-205ENST00000553555 C5P01031 1676 aa17.58■□□□□ 0.4
APEX1-205ENST00000553555 SLC4A2P04920 1241 aa17.58■□□□□ 0.4
APEX1-205ENST00000553555 MS4A1P11836 297 aa17.58■□□□□ 0.4
APEX1-205ENST00000553555 PIGBQ92521 554 aa17.58■□□□□ 0.4
APEX1-205ENST00000553555 ZNF496Q96IT1 587 aaPredicted RBP17.58■□□□□ 0.4
APEX1-205ENST00000553555 HDGFL1Q5TGJ6 251 aa17.57■□□□□ 0.4
APEX1-205ENST00000553555 PANK1Q8TE04 598 aa17.57■□□□□ 0.4
APEX1-205ENST00000553555 FMNL2Q96PY5 1086 aa17.57■□□□□ 0.4
APEX1-205ENST00000553555 STK31Q9BXU1 1019 aa17.57■□□□□ 0.4
APEX1-205ENST00000553555 A0A0G2JS52 829 aa17.56■□□□□ 0.4
APEX1-205ENST00000553555 TRIM27P14373 513 aa17.56■□□□□ 0.4
APEX1-205ENST00000553555 EIF2S2P20042 333 aaKnown RBP17.56■□□□□ 0.4
APEX1-205ENST00000553555 MYT1Q01538 1121 aa17.56■□□□□ 0.4
APEX1-205ENST00000553555 DZIP1LQ8IYY4 767 aaKnown RBP17.56■□□□□ 0.4
APEX1-205ENST00000553555 NECTIN2Q92692 538 aa17.56■□□□□ 0.4
APEX1-205ENST00000553555 BCL9O00512 1426 aa17.56■□□□□ 0.4
APEX1-205ENST00000553555 PRAMEF22A3QJZ6 481 aa17.55■□□□□ 0.4
APEX1-205ENST00000553555 RLBP1P12271 317 aa17.55■□□□□ 0.4
APEX1-205ENST00000553555 PRIM1P49642 420 aaKnown RBP17.55■□□□□ 0.4
APEX1-205ENST00000553555 PPP4R2Q9NY27 417 aa17.55■□□□□ 0.4
APEX1-205ENST00000553555 KCPQ6ZWJ8 1503 aa17.55■□□□□ 0.4
APEX1-205ENST00000553555 SNRPA1P09661 255 aaKnown RBP17.54■□□□□ 0.4
APEX1-205ENST00000553555 ZNF772Q68DY9 489 aaPredicted RBP17.54■□□□□ 0.4
APEX1-205ENST00000553555 CLUAP1Q96AJ1 413 aa17.54■□□□□ 0.4
APEX1-205ENST00000553555 G2E3Q7L622 706 aa17.53■□□□□ 0.4
APEX1-205ENST00000553555 FTSJ3Q8IY81 847 aaKnown RBP17.53■□□□□ 0.4
APEX1-205ENST00000553555 SEPT12Q8IYM1 358 aa17.53■□□□□ 0.4
APEX1-205ENST00000553555 API5Q9BZZ5 524 aaKnown RBP17.53■□□□□ 0.4
APEX1-205ENST00000553555 ATG3Q9NT62 314 aa17.53■□□□□ 0.4
APEX1-205ENST00000553555 ASAP1Q9ULH1 1129 aa17.53■□□□□ 0.4
APEX1-205ENST00000553555 COG6Q9Y2V7 657 aa17.53■□□□□ 0.4
APEX1-205ENST00000553555 LAMB4A4D0S4 1761 aa17.53■□□□□ 0.4
APEX1-205ENST00000553555 PTPRCP08575 1304 aa17.52■□□□□ 0.4
APEX1-205ENST00000553555 SYTL4Q96C24 671 aaPredicted RBP17.52■□□□□ 0.4
APEX1-205ENST00000553555 ACSBG1Q96GR2 724 aa17.52■□□□□ 0.4
APEX1-205ENST00000553555 BRWD3Q6RI45 1802 aa17.51■□□□□ 0.39
APEX1-205ENST00000553555 CHPF2Q9P2E5 772 aa17.51■□□□□ 0.39
APEX1-205ENST00000553555 USP16Q9Y5T5 823 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms