RNA–Protein interactions for RNA: ENST00000553142.5

B4GALNT1-216, Transcript of beta-1,4-N-acetyl-galactosaminyltransferase 1, humanhuman

TSL 2

Gene B4GALNT1, Length 5,580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
B4GALNT1-216ENST00000553142 ERC1Q8IUD2 1116 aa17.81■□□□□ 0.44
B4GALNT1-216ENST00000553142 CRACR2AQ9BSW2 395 aa17.81■□□□□ 0.44
B4GALNT1-216ENST00000553142 CNNM1Q9NRU3 951 aa17.81■□□□□ 0.44
B4GALNT1-216ENST00000553142 PHF8Q9UPP1 1060 aa17.81■□□□□ 0.44
B4GALNT1-216ENST00000553142 EIF4G3O43432 1585 aaKnown RBP17.81■□□□□ 0.44
B4GALNT1-216ENST00000553142 SCAF11Q99590 1463 aaKnown RBP17.81■□□□□ 0.44
B4GALNT1-216ENST00000553142 KRT85P78386 507 aa17.81■□□□□ 0.44
B4GALNT1-216ENST00000553142 DUOX2Q9NRD8 1548 aa17.81■□□□□ 0.44
B4GALNT1-216ENST00000553142 WDR33Q9C0J8 1336 aaKnown RBP17.81■□□□□ 0.44
B4GALNT1-216ENST00000553142 JAKMIP3Q5VZ66 844 aa17.81■□□□□ 0.44
B4GALNT1-216ENST00000553142 TNRQ92752 1358 aa17.81■□□□□ 0.44
B4GALNT1-216ENST00000553142 NEBLO76041 1014 aa17.8■□□□□ 0.44
B4GALNT1-216ENST00000553142 FILIP1Q7Z7B0 1213 aa17.8■□□□□ 0.44
B4GALNT1-216ENST00000553142 KIAA1328Q86T90 577 aa17.8■□□□□ 0.44
B4GALNT1-216ENST00000553142 SRCIN1Q9C0H9 1055 aa17.8■□□□□ 0.44
B4GALNT1-216ENST00000553142 CYP46A1Q9Y6A2 500 aa17.8■□□□□ 0.44
B4GALNT1-216ENST00000553142 CFAP45Q9UL16 551 aa17.8■□□□□ 0.44
B4GALNT1-216ENST00000553142 TRIM22Q8IYM9 498 aa17.8■□□□□ 0.44
B4GALNT1-216ENST00000553142 RPRD2Q5VT52 1461 aaKnown RBP17.8■□□□□ 0.44
B4GALNT1-216ENST00000553142 SF3B2Q13435 895 aaKnown RBP17.8■□□□□ 0.44
B4GALNT1-216ENST00000553142 EPB41L2O43491 1005 aaKnown RBP17.79■□□□□ 0.44
B4GALNT1-216ENST00000553142 PDZRN3Q9UPQ7 1066 aa17.79■□□□□ 0.44
B4GALNT1-216ENST00000553142 TMPOP42166 694 aaKnown RBP17.79■□□□□ 0.44
B4GALNT1-216ENST00000553142 CEP57L1Q8IYX8 460 aa17.79■□□□□ 0.44
B4GALNT1-216ENST00000553142 ARHGAP29Q52LW3 1261 aa17.79■□□□□ 0.44
B4GALNT1-216ENST00000553142 CCDC148Q8NFR7 591 aa17.79■□□□□ 0.44
B4GALNT1-216ENST00000553142 CCDC113Q9H0I3 377 aa17.79■□□□□ 0.44
B4GALNT1-216ENST00000553142 TTC39AQ5SRH9 613 aa17.79■□□□□ 0.44
B4GALNT1-216ENST00000553142 GCC1Q96CN9 775 aa17.79■□□□□ 0.44
B4GALNT1-216ENST00000553142 GBP3Q9H0R5 595 aa17.78■□□□□ 0.44
B4GALNT1-216ENST00000553142 ESPNB1AK53 854 aa17.78■□□□□ 0.44
B4GALNT1-216ENST00000553142 C14orf93Q9H972 538 aaKnown RBP17.78■□□□□ 0.44
B4GALNT1-216ENST00000553142 PRDM10Q9NQV6 1147 aa17.78■□□□□ 0.44
B4GALNT1-216ENST00000553142 SSR1P43307 286 aaKnown RBP17.78■□□□□ 0.44
B4GALNT1-216ENST00000553142 ATP2B2Q01814 1243 aa17.78■□□□□ 0.44
B4GALNT1-216ENST00000553142 USHBP1Q8N6Y0 703 aa17.78■□□□□ 0.44
B4GALNT1-216ENST00000553142 ANKRD1Q15327 319 aa17.77■□□□□ 0.44
B4GALNT1-216ENST00000553142 CEP63Q96MT8 703 aa17.77■□□□□ 0.44
B4GALNT1-216ENST00000553142 UPF3BQ9BZI7 483 aaKnown RBP17.77■□□□□ 0.44
B4GALNT1-216ENST00000553142 SIL1Q9H173 461 aa17.77■□□□□ 0.44
B4GALNT1-216ENST00000553142 ZNF518AQ6AHZ1 1483 aa17.77■□□□□ 0.44
B4GALNT1-216ENST00000553142 ATF7IPQ6VMQ6 1270 aa17.77■□□□□ 0.44
B4GALNT1-216ENST00000553142 C11orf95C9JLR9 678 aaPredicted RBP17.77■□□□□ 0.43
B4GALNT1-216ENST00000553142 FOXO3O43524 673 aa17.77■□□□□ 0.43
B4GALNT1-216ENST00000553142 DESP17661 470 aa17.77■□□□□ 0.43
B4GALNT1-216ENST00000553142 A2MP01023 1474 aa17.76■□□□□ 0.43
B4GALNT1-216ENST00000553142 EIF5P55010 431 aaKnown RBP17.76■□□□□ 0.43
B4GALNT1-216ENST00000553142 LARP1BQ659C4 914 aaKnown RBP17.76■□□□□ 0.43
B4GALNT1-216ENST00000553142 MCM10Q7L590 875 aa17.76■□□□□ 0.43
B4GALNT1-216ENST00000553142 SPATA32Q96LK8 384 aa17.76■□□□□ 0.43
B4GALNT1-216ENST00000553142 MIS18AQ9NYP9 233 aa17.76■□□□□ 0.43
B4GALNT1-216ENST00000553142 NOL7Q9UMY1 257 aaKnown RBP17.76■□□□□ 0.43
B4GALNT1-216ENST00000553142 SSBP05455 408 aaKnown RBP eCLIP17.76■□□□□ 0.43
B4GALNT1-216ENST00000553142 K7ELQ4 463 aaPredicted RBP17.76■□□□□ 0.43
B4GALNT1-216ENST00000553142 CCDC158Q5M9N0 1113 aa17.76■□□□□ 0.43
B4GALNT1-216ENST00000553142 NUP62CLQ9H1M0 184 aa17.76■□□□□ 0.43
B4GALNT1-216ENST00000553142 CCDC69A6NI79 296 aa17.75■□□□□ 0.43
B4GALNT1-216ENST00000553142 STAMBPO95630 424 aa17.75■□□□□ 0.43
B4GALNT1-216ENST00000553142 CBX1P83916 185 aa17.75■□□□□ 0.43
B4GALNT1-216ENST00000553142 EMILIN1Q9Y6C2 1016 aa17.75■□□□□ 0.43
B4GALNT1-216ENST00000553142 SOGA3Q5TF21 947 aa17.75■□□□□ 0.43
B4GALNT1-216ENST00000553142 MVPQ14764 893 aaKnown RBP17.74■□□□□ 0.43
B4GALNT1-216ENST00000553142 WDR62O43379 1518 aa17.74■□□□□ 0.43
B4GALNT1-216ENST00000553142 SMTNL1A8MU46 457 aa17.74■□□□□ 0.43
B4GALNT1-216ENST00000553142 NUP133Q8WUM0 1156 aa17.74■□□□□ 0.43
B4GALNT1-216ENST00000553142 THUMPD2Q9BTF0 503 aaKnown RBP17.74■□□□□ 0.43
B4GALNT1-216ENST00000553142 BMP2KQ9NSY1 1161 aaPredicted RBP17.74■□□□□ 0.43
B4GALNT1-216ENST00000553142 CCDC57Q2TAC2 916 aa17.73■□□□□ 0.43
B4GALNT1-216ENST00000553142 RNF187Q5TA31 235 aaPredicted RBP17.73■□□□□ 0.43
B4GALNT1-216ENST00000553142 GPATCH11Q8N954 259 aa17.73■□□□□ 0.43
B4GALNT1-216ENST00000553142 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.73■□□□□ 0.43
B4GALNT1-216ENST00000553142 PPP1R1BQ9UD71 204 aaPredicted RBP17.73■□□□□ 0.43
B4GALNT1-216ENST00000553142 GNL3LQ9NVN8 582 aaKnown RBP17.72■□□□□ 0.43
B4GALNT1-216ENST00000553142 IPO4Q8TEX9 1081 aaKnown RBP17.72■□□□□ 0.43
B4GALNT1-216ENST00000553142 PBRM1Q86U86 1689 aa17.72■□□□□ 0.43
B4GALNT1-216ENST00000553142 TRERF1Q96PN7 1200 aa17.72■□□□□ 0.43
B4GALNT1-216ENST00000553142 DISP3Q9P2K9 1392 aa17.72■□□□□ 0.43
B4GALNT1-216ENST00000553142 ADAMTS2O95450 1211 aa17.72■□□□□ 0.43
B4GALNT1-216ENST00000553142 SLFN5Q08AF3 891 aa17.72■□□□□ 0.43
B4GALNT1-216ENST00000553142 CFAP100Q494V2 611 aa17.72■□□□□ 0.43
B4GALNT1-216ENST00000553142 LRPPRCP42704 1394 aaKnown RBP17.71■□□□□ 0.43
B4GALNT1-216ENST00000553142 MAP9Q49MG5 647 aa17.71■□□□□ 0.43
B4GALNT1-216ENST00000553142 PTPRKQ15262 1439 aa17.71■□□□□ 0.43
B4GALNT1-216ENST00000553142 TRAPPC8Q9Y2L5 1435 aa17.71■□□□□ 0.43
B4GALNT1-216ENST00000553142 KRT28Q7Z3Y7 464 aa17.71■□□□□ 0.43
B4GALNT1-216ENST00000553142 TMOD3Q9NYL9 352 aa17.71■□□□□ 0.43
B4GALNT1-216ENST00000553142 RBM25P49756 843 aaKnown RBP17.71■□□□□ 0.42
B4GALNT1-216ENST00000553142 NACAP1Q9BZK3 213 aa17.71■□□□□ 0.42
B4GALNT1-216ENST00000553142 MATR3P43243 847 aaKnown RBP eCLIP17.7■□□□□ 0.42
B4GALNT1-216ENST00000553142 SMC1AQ14683 1233 aaKnown RBP17.7■□□□□ 0.42
B4GALNT1-216ENST00000553142 CETN2P41208 172 aa17.7■□□□□ 0.42
B4GALNT1-216ENST00000553142 ZNF397Q8NF99 534 aaPredicted RBP17.7■□□□□ 0.42
B4GALNT1-216ENST00000553142 IFFO1Q0D2I5 559 aa17.7■□□□□ 0.42
B4GALNT1-216ENST00000553142 PTPN14Q15678 1187 aa17.7■□□□□ 0.42
B4GALNT1-216ENST00000553142 DUSP27Q5VZP5 1158 aa17.7■□□□□ 0.42
B4GALNT1-216ENST00000553142 DDX11Q96FC9 970 aa17.7■□□□□ 0.42
B4GALNT1-216ENST00000553142 CALCOCO1Q9P1Z2 691 aa17.7■□□□□ 0.42
B4GALNT1-216ENST00000553142 KIF2AO00139 706 aaPredicted RBP17.69■□□□□ 0.42
B4GALNT1-216ENST00000553142 MICALCLQ6ZW33 695 aa17.69■□□□□ 0.42
B4GALNT1-216ENST00000553142 MAP4K4O95819 1239 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms