RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 MRPL50Q8N5N7 158 aaKnown RBP15.18■□□□□ 0.02
HDAC7-230ENST00000552960 RNF214Q8ND24 703 aa15.18■□□□□ 0.02
HDAC7-230ENST00000552960 EYA1Q99502 592 aa15.18■□□□□ 0.02
HDAC7-230ENST00000552960 KRT24Q2M2I5 525 aa15.18■□□□□ 0.02
HDAC7-230ENST00000552960 ZSCAN23Q3MJ62 389 aa15.18■□□□□ 0.02
HDAC7-230ENST00000552960 CHMP4BQ9H444 224 aaKnown RBP15.18■□□□□ 0.02
HDAC7-230ENST00000552960 ANKARQ7Z5J8 1434 aa15.17■□□□□ 0.02
HDAC7-230ENST00000552960 PRIM1P49642 420 aaKnown RBP15.17■□□□□ 0.02
HDAC7-230ENST00000552960 MIS18AQ9NYP9 233 aa15.17■□□□□ 0.02
HDAC7-230ENST00000552960 MPNDQ8N594 471 aa15.17■□□□□ 0.02
HDAC7-230ENST00000552960 RBSNQ9H1K0 784 aa15.17■□□□□ 0.02
HDAC7-230ENST00000552960 RABEP1Q15276 862 aa15.16■□□□□ 0.02
HDAC7-230ENST00000552960 PLEKHM2Q8IWE5 1019 aa15.16■□□□□ 0.02
HDAC7-230ENST00000552960 MBIPQ9NS73 344 aa15.16■□□□□ 0.02
HDAC7-230ENST00000552960 NUCB2P80303 420 aa15.16■□□□□ 0.02
HDAC7-230ENST00000552960 C8orf58Q8NAV2 365 aa15.16■□□□□ 0.02
HDAC7-230ENST00000552960 HOXC9P31274 260 aa15.15■□□□□ 0.02
HDAC7-230ENST00000552960 NCBP3Q53F19 620 aaKnown RBP15.15■□□□□ 0.02
HDAC7-230ENST00000552960 PPP1R9BQ96SB3 815 aa15.15■□□□□ 0.02
HDAC7-230ENST00000552960 TMEM94Q12767 1356 aa15.14■□□□□ 0.01
HDAC7-230ENST00000552960 GNAI1P63096 354 aa15.14■□□□□ 0.01
HDAC7-230ENST00000552960 SYCE3A1L190 88 aa15.14■□□□□ 0.01
HDAC7-230ENST00000552960 MTHFSDQ2M296 383 aaKnown RBP15.14■□□□□ 0.01
HDAC7-230ENST00000552960 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.14■□□□□ 0.01
HDAC7-230ENST00000552960 LMBRD1Q9NUN5 540 aa15.14■□□□□ 0.01
HDAC7-230ENST00000552960 ST18O60284 1047 aa15.13■□□□□ 0.01
HDAC7-230ENST00000552960 OFD1O75665 1012 aa15.13■□□□□ 0.01
HDAC7-230ENST00000552960 PTMAP06454 111 aaKnown RBP15.13■□□□□ 0.01
HDAC7-230ENST00000552960 INTS3Q68E01 1043 aaKnown RBP15.13■□□□□ 0.01
HDAC7-230ENST00000552960 CASC1Q6TDU7 716 aa15.13■□□□□ 0.01
HDAC7-230ENST00000552960 PDCL3Q9H2J4 239 aa15.13■□□□□ 0.01
HDAC7-230ENST00000552960 SBNO1A3KN83 1393 aa15.13■□□□□ 0.01
HDAC7-230ENST00000552960 FLT4P35916 1363 aa15.13■□□□□ 0.01
HDAC7-230ENST00000552960 TTC22Q5TAA0 569 aa15.12■□□□□ 0.01
HDAC7-230ENST00000552960 LRRC59Q96AG4 307 aaKnown RBP15.12■□□□□ 0.01
HDAC7-230ENST00000552960 USP26Q9BXU7 913 aa15.12■□□□□ 0.01
HDAC7-230ENST00000552960 SDSP20132 328 aa15.11■□□□□ 0.01
HDAC7-230ENST00000552960 API5Q9BZZ5 524 aaKnown RBP15.11■□□□□ 0.01
HDAC7-230ENST00000552960 C19orf44Q9H6X5 657 aa15.11■□□□□ 0.01
HDAC7-230ENST00000552960 MARF1Q9Y4F3 1742 aaKnown RBP15.11■□□□□ 0.01
HDAC7-230ENST00000552960 CABLES1Q8TDN4 633 aa15.11■□□□□ 0.01
HDAC7-230ENST00000552960 STRCP1A6NGW2 1772 aa15.11■□□□□ 0.01
HDAC7-230ENST00000552960 KRT28Q7Z3Y7 464 aa15.1■□□□□ 0.01
HDAC7-230ENST00000552960 GPT2Q8TD30 523 aa15.1■□□□□ 0.01
HDAC7-230ENST00000552960 TSHZ3Q63HK5 1081 aa15.1■□□□□ 0.01
HDAC7-230ENST00000552960 SLC4A10Q6U841 1118 aa15.1■□□□□ 0.01
HDAC7-230ENST00000552960 NSFL1CQ9UNZ2 370 aaKnown RBP15.1■□□□□ 0.01
HDAC7-230ENST00000552960 NEK4P51957 841 aa15.09■□□□□ 0.01
HDAC7-230ENST00000552960 ARHGAP45Q92619 1136 aa15.09■□□□□ 0.01
HDAC7-230ENST00000552960 ZNF428Q96B54 188 aa15.09■□□□□ 0.01
HDAC7-230ENST00000552960 UQCRHLA0A096LP55 91 aa15.09■□□□□ 0.01
HDAC7-230ENST00000552960 UQCRHP07919 91 aa15.09■□□□□ 0.01
HDAC7-230ENST00000552960 ZNF445P59923 1031 aa15.09■□□□□ 0.01
HDAC7-230ENST00000552960 DNTTIP2Q5QJE6 756 aaKnown RBP15.09■□□□□ 0.01
HDAC7-230ENST00000552960 DLG5Q8TDM6 1919 aa15.09■□□□□ 0.01
HDAC7-230ENST00000552960 ZNF853P0CG23 659 aa15.09■□□□□ 0.01
HDAC7-230ENST00000552960 ZC3H6P61129 1189 aaKnown RBP15.09■□□□□ 0.01
HDAC7-230ENST00000552960 NBPF6Q5VWK0 638 aa15.09■□□□□ 0.01
HDAC7-230ENST00000552960 NBPF4Q96M43 638 aa15.09■□□□□ 0.01
HDAC7-230ENST00000552960 AXIN2Q9Y2T1 843 aa15.09■□□□□ 0.01
HDAC7-230ENST00000552960 ZNF335Q9H4Z2 1342 aaPredicted RBP15.08■□□□□ 0.01
HDAC7-230ENST00000552960 GCP02774 474 aa15.08■□□□□ 0.01
HDAC7-230ENST00000552960 DCTPP1Q9H773 170 aa15.08■□□□□ 0.01
HDAC7-230ENST00000552960 TMEM63CQ9P1W3 806 aa15.08■□□□□ 0.01
HDAC7-230ENST00000552960 C1orf167Q5SNV9 1468 aa15.08■□□□□ 0
HDAC7-230ENST00000552960 IFT57Q9NWB7 429 aa15.08■□□□□ 0
HDAC7-230ENST00000552960 ATF3P18847 181 aa15.07■□□□□ 0
HDAC7-230ENST00000552960 ABCC4O15439 1325 aa15.07■□□□□ 0
HDAC7-230ENST00000552960 IGSF1Q8N6C5 1336 aa15.07■□□□□ 0
HDAC7-230ENST00000552960 A0A0U1RQG5 324 aaPredicted RBP15.07■□□□□ 0
HDAC7-230ENST00000552960 GDPD2Q9HCC8 539 aa15.07■□□□□ 0
HDAC7-230ENST00000552960 CFAP44Q96MT7 982 aa15.07■□□□□ 0
HDAC7-230ENST00000552960 PRDM10Q9NQV6 1147 aa15.06■□□□□ 0
HDAC7-230ENST00000552960 NOL7Q9UMY1 257 aaKnown RBP15.06■□□□□ 0
HDAC7-230ENST00000552960 ZDHHC9Q9Y397 364 aa15.06■□□□□ 0
HDAC7-230ENST00000552960 REC8O95072 547 aa15.05■□□□□ 0
HDAC7-230ENST00000552960 MEIS3Q99687 375 aa15.05■□□□□ 0
HDAC7-230ENST00000552960 CWC22Q9HCG8 908 aaKnown RBP15.05■□□□□ 0
HDAC7-230ENST00000552960 CLEC17AQ6ZS10 378 aa15.05■□□□□ -0
HDAC7-230ENST00000552960 PODXL2Q9NZ53 605 aa15.05■□□□□ -0
HDAC7-230ENST00000552960 RGPD1P0DJD0 1748 aa15.05■□□□□ -0
HDAC7-230ENST00000552960 PLCB2Q00722 1185 aa15.05■□□□□ -0
HDAC7-230ENST00000552960 NWD1Q149M9 1564 aa15.05■□□□□ -0
HDAC7-230ENST00000552960 LMTK3Q96Q04 1460 aa15.04■□□□□ -0
HDAC7-230ENST00000552960 BRPF1P55201 1214 aaPredicted RBP15.04■□□□□ -0
HDAC7-230ENST00000552960 NECTIN2Q92692 538 aa15.04■□□□□ -0
HDAC7-230ENST00000552960 RILPL2Q969X0 211 aa15.04■□□□□ -0
HDAC7-230ENST00000552960 ARHGEF10O15013 1369 aa15.04■□□□□ -0
HDAC7-230ENST00000552960 TRIM6-TRIM34B2RNG4 842 aa15.04■□□□□ -0
HDAC7-230ENST00000552960 LRSAM1Q6UWE0 723 aa15.04■□□□□ -0
HDAC7-230ENST00000552960 IP6K1Q92551 441 aa15.04■□□□□ -0
HDAC7-230ENST00000552960 ERC2O15083 957 aa15.03■□□□□ -0
HDAC7-230ENST00000552960 CYP2E1P05181 493 aaPredicted RBP15.03■□□□□ -0
HDAC7-230ENST00000552960 CEP85Q6P2H3 762 aa15.03■□□□□ -0
HDAC7-230ENST00000552960 ANKRD44Q8N8A2 993 aa15.03■□□□□ -0
HDAC7-230ENST00000552960 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.03■□□□□ -0
HDAC7-230ENST00000552960 ZKSCAN5Q9Y2L8 839 aa15.03■□□□□ -0
HDAC7-230ENST00000552960 IBTKQ9P2D0 1353 aaPredicted RBP15.03■□□□□ -0
HDAC7-230ENST00000552960 EXOC6BQ9Y2D4 811 aa15.03■□□□□ -0
HDAC7-230ENST00000552960 KDRP35968 1356 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms