RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 SLC52A2Q9HAB3 445 aa13.08□□□□□ -0.32
PFDN5-218ENST00000552742 TAF1LQ8IZX4 1826 aa13.08□□□□□ -0.32
PFDN5-218ENST00000552742 SLC4A9Q96Q91 983 aa13.07□□□□□ -0.32
PFDN5-218ENST00000552742 PLEKHF1Q96S99 279 aa13.07□□□□□ -0.32
PFDN5-218ENST00000552742 TFCP2L1Q9NZI6 479 aa13.07□□□□□ -0.32
PFDN5-218ENST00000552742 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
PFDN5-218ENST00000552742 PAPPAQ13219 1627 aa13.06□□□□□ -0.32
PFDN5-218ENST00000552742 PTCD1O75127 700 aaKnown RBP13.06□□□□□ -0.32
PFDN5-218ENST00000552742 ATP6V1AP38606 617 aa13.06□□□□□ -0.32
PFDN5-218ENST00000552742 ITPK1Q13572 414 aa13.06□□□□□ -0.32
PFDN5-218ENST00000552742 SLC39A6Q13433 755 aa13.05□□□□□ -0.32
PFDN5-218ENST00000552742 LINC00116Q8NCU8 138 aa13.05□□□□□ -0.32
PFDN5-218ENST00000552742 DLG5Q8TDM6 1919 aa13.05□□□□□ -0.32
PFDN5-218ENST00000552742 C5P01031 1676 aa13.05□□□□□ -0.32
PFDN5-218ENST00000552742 ADAMTS7Q9UKP4 1686 aa13.05□□□□□ -0.32
PFDN5-218ENST00000552742 ZBTB7AO95365 584 aa13.04□□□□□ -0.32
PFDN5-218ENST00000552742 NEFMP07197 916 aa13.04□□□□□ -0.32
PFDN5-218ENST00000552742 TEFQ10587 303 aa13.04□□□□□ -0.32
PFDN5-218ENST00000552742 DCTN1Q14203 1278 aa13.04□□□□□ -0.32
PFDN5-218ENST00000552742 CCDC184Q52MB2 194 aa13.04□□□□□ -0.32
PFDN5-218ENST00000552742 MCM10Q7L590 875 aa13.04□□□□□ -0.32
PFDN5-218ENST00000552742 PNNQ9H307 717 aaKnown RBP13.04□□□□□ -0.32
PFDN5-218ENST00000552742 ADAMTS8Q9UP79 889 aa13.04□□□□□ -0.32
PFDN5-218ENST00000552742 ATF5Q9Y2D1 282 aaPredicted RBP13.04□□□□□ -0.32
PFDN5-218ENST00000552742 TUBGCP6Q96RT7 1819 aa13.04□□□□□ -0.32
PFDN5-218ENST00000552742 CASZ1Q86V15 1759 aa13.03□□□□□ -0.32
PFDN5-218ENST00000552742 ANP32CO43423 234 aa13.03□□□□□ -0.32
PFDN5-218ENST00000552742 WDR43Q15061 677 aaKnown RBP eCLIP13.03□□□□□ -0.32
PFDN5-218ENST00000552742 NFE2L2Q16236 605 aa13.03□□□□□ -0.32
PFDN5-218ENST00000552742 SMIM5Q71RC9 77 aa13.03□□□□□ -0.32
PFDN5-218ENST00000552742 CCDC146Q8IYE0 955 aa13.03□□□□□ -0.32
PFDN5-218ENST00000552742 RTF1Q92541 710 aaKnown RBP13.03□□□□□ -0.32
PFDN5-218ENST00000552742 HTATSF1O43719 755 aaKnown RBP13.02□□□□□ -0.33
PFDN5-218ENST00000552742 HMGB2P26583 209 aaKnown RBP13.02□□□□□ -0.33
PFDN5-218ENST00000552742 COL23A1Q86Y22 540 aaPredicted RBP13.02□□□□□ -0.33
PFDN5-218ENST00000552742 SPON1Q9HCB6 807 aa13.02□□□□□ -0.33
PFDN5-218ENST00000552742 PNPLA7Q6ZV29 1317 aa13.02□□□□□ -0.33
PFDN5-218ENST00000552742 MAPK8IP3Q9UPT6 1336 aa13.02□□□□□ -0.33
PFDN5-218ENST00000552742 MSH5O43196 834 aa13.01□□□□□ -0.33
PFDN5-218ENST00000552742 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
PFDN5-218ENST00000552742 AK7Q96M32 723 aa13.01□□□□□ -0.33
PFDN5-218ENST00000552742 CEMIPQ8WUJ3 1361 aa13.01□□□□□ -0.33
PFDN5-218ENST00000552742 MRC1P22897 1456 aa13.01□□□□□ -0.33
PFDN5-218ENST00000552742 C4BP0C0L5 1744 aa13.01□□□□□ -0.33
PFDN5-218ENST00000552742 SIPA1L3O60292 1781 aaPredicted RBP13.01□□□□□ -0.33
PFDN5-218ENST00000552742 MYH14Q7Z406 1995 aaKnown RBP13.01□□□□□ -0.33
PFDN5-218ENST00000552742 QSER1Q2KHR3 1735 aa13□□□□□ -0.33
PFDN5-218ENST00000552742 KCNQ3O43525 872 aa13□□□□□ -0.33
PFDN5-218ENST00000552742 BTBD11A6QL63 1104 aa12.99□□□□□ -0.33
PFDN5-218ENST00000552742 RIPK4P57078 832 aa12.99□□□□□ -0.33
PFDN5-218ENST00000552742 NEUROD2Q15784 382 aa12.99□□□□□ -0.33
PFDN5-218ENST00000552742 RC3H1Q5TC82 1133 aaKnown RBP12.99□□□□□ -0.33
PFDN5-218ENST00000552742 ZNF790Q6PG37 636 aa12.99□□□□□ -0.33
PFDN5-218ENST00000552742 DNAJC10Q8IXB1 793 aa12.99□□□□□ -0.33
PFDN5-218ENST00000552742 RUNDC1Q96C34 613 aa12.99□□□□□ -0.33
PFDN5-218ENST00000552742 THUMPD2Q9BTF0 503 aaKnown RBP12.99□□□□□ -0.33
PFDN5-218ENST00000552742 MTFR1LQ9H019 292 aa12.99□□□□□ -0.33
PFDN5-218ENST00000552742 MIS18AQ9NYP9 233 aa12.99□□□□□ -0.33
PFDN5-218ENST00000552742 RRP7AQ9Y3A4 280 aaKnown RBP12.99□□□□□ -0.33
PFDN5-218ENST00000552742 UBR3Q6ZT12 1888 aa12.99□□□□□ -0.33
PFDN5-218ENST00000552742 ZNF831Q5JPB2 1677 aa12.99□□□□□ -0.33
PFDN5-218ENST00000552742 LRP5O75197 1615 aa12.99□□□□□ -0.33
PFDN5-218ENST00000552742 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.98□□□□□ -0.33
PFDN5-218ENST00000552742 GNPATO15228 680 aa12.98□□□□□ -0.33
PFDN5-218ENST00000552742 PHF14O94880 888 aa12.98□□□□□ -0.33
PFDN5-218ENST00000552742 TMPOP42166 694 aaKnown RBP12.98□□□□□ -0.33
PFDN5-218ENST00000552742 PTGER2P43116 358 aa12.98□□□□□ -0.33
PFDN5-218ENST00000552742 TAF7Q15545 349 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-218ENST00000552742 TTC5Q8N0Z6 440 aa12.98□□□□□ -0.33
PFDN5-218ENST00000552742 SLC16A10Q8TF71 515 aa12.98□□□□□ -0.33
PFDN5-218ENST00000552742 ZNF496Q96IT1 587 aaPredicted RBP12.98□□□□□ -0.33
PFDN5-218ENST00000552742 COL5A3P25940 1745 aaPredicted RBP12.97□□□□□ -0.33
PFDN5-218ENST00000552742 CRKLP46109 303 aaKnown RBP12.97□□□□□ -0.33
PFDN5-218ENST00000552742 FLAD1Q8NFF5 587 aa12.97□□□□□ -0.33
PFDN5-218ENST00000552742 KCPQ6ZWJ8 1503 aa12.97□□□□□ -0.33
PFDN5-218ENST00000552742 TJP1Q07157 1748 aa12.96□□□□□ -0.33
PFDN5-218ENST00000552742 CYP19A1P11511 503 aaPredicted RBP12.96□□□□□ -0.33
PFDN5-218ENST00000552742 INTS5Q6P9B9 1019 aaKnown RBP12.96□□□□□ -0.33
PFDN5-218ENST00000552742 PNISRQ8TF01 805 aaKnown RBP12.96□□□□□ -0.33
PFDN5-218ENST00000552742 MRS2Q9HD23 443 aa12.96□□□□□ -0.33
PFDN5-218ENST00000552742 PPP1R1BQ9UD71 204 aaPredicted RBP12.96□□□□□ -0.33
PFDN5-218ENST00000552742 UBR2Q8IWV8 1755 aa12.96□□□□□ -0.34
PFDN5-218ENST00000552742 RPS6KA4O75676 772 aa12.95□□□□□ -0.34
PFDN5-218ENST00000552742 SSFA2P28290 1259 aa12.95□□□□□ -0.34
PFDN5-218ENST00000552742 TRAPPC3LQ5T215 181 aa12.95□□□□□ -0.34
PFDN5-218ENST00000552742 MSL1Q68DK7 614 aa12.95□□□□□ -0.34
PFDN5-218ENST00000552742 VSIG10Q8N0Z9 540 aa12.95□□□□□ -0.34
PFDN5-218ENST00000552742 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
PFDN5-218ENST00000552742 SGIP1Q9BQI5 828 aa12.95□□□□□ -0.34
PFDN5-218ENST00000552742 RTCBQ9Y3I0 505 aaKnown RBP12.95□□□□□ -0.34
PFDN5-218ENST00000552742 CNTNAP4Q9C0A0 1308 aa12.94□□□□□ -0.34
PFDN5-218ENST00000552742 APAF1O14727 1248 aa12.94□□□□□ -0.34
PFDN5-218ENST00000552742 ARHGEF1Q92888 912 aaKnown RBP12.94□□□□□ -0.34
PFDN5-218ENST00000552742 CCDC87Q9NVE4 849 aa12.94□□□□□ -0.34
PFDN5-218ENST00000552742 TRIM35Q9UPQ4 493 aa12.94□□□□□ -0.34
PFDN5-218ENST00000552742 HEG1Q9ULI3 1381 aa12.93□□□□□ -0.34
PFDN5-218ENST00000552742 SENP3-EIF4A1A0A087X0R7 540 aa12.92□□□□□ -0.34
PFDN5-218ENST00000552742 PRAMEF22A3QJZ6 481 aa12.92□□□□□ -0.34
PFDN5-218ENST00000552742 STARD3NLO95772 234 aa12.92□□□□□ -0.34
PFDN5-218ENST00000552742 ARXQ96QS3 562 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms