RNA–Protein interactions for RNA: ENST00000551179.1

CNOT2-229, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 355 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-229ENST00000551179 PLEKHO1Q53GL0 409 aaPredicted RBP12.81□□□□□ -0.36
CNOT2-229ENST00000551179 C1orf141Q5JVX7 400 aa12.81□□□□□ -0.36
CNOT2-229ENST00000551179 CADPS2Q86UW7 1296 aa12.81□□□□□ -0.36
CNOT2-229ENST00000551179 RASEFQ8IZ41 740 aa12.81□□□□□ -0.36
CNOT2-229ENST00000551179 MSH6P52701 1360 aa12.81□□□□□ -0.36
CNOT2-229ENST00000551179 HMMRO75330 724 aa12.8□□□□□ -0.36
CNOT2-229ENST00000551179 CCT4P50991 539 aaKnown RBP12.8□□□□□ -0.36
CNOT2-229ENST00000551179 KRT28Q7Z3Y7 464 aa12.8□□□□□ -0.36
CNOT2-229ENST00000551179 SMC5Q8IY18 1101 aa12.8□□□□□ -0.36
CNOT2-229ENST00000551179 TSPYL2Q9H2G4 693 aaPredicted RBP12.8□□□□□ -0.36
CNOT2-229ENST00000551179 FOXO3O43524 673 aa12.79□□□□□ -0.36
CNOT2-229ENST00000551179 DCAF8Q5TAQ9 597 aa12.79□□□□□ -0.36
CNOT2-229ENST00000551179 RBM33Q96EV2 1170 aaKnown RBP12.79□□□□□ -0.36
CNOT2-229ENST00000551179 USP19O94966 1318 aa12.79□□□□□ -0.36
CNOT2-229ENST00000551179 NPHP3Q7Z494 1330 aa12.79□□□□□ -0.36
CNOT2-229ENST00000551179 ZBTB7BO15156 539 aaPredicted RBP12.78□□□□□ -0.36
CNOT2-229ENST00000551179 GCP02774 474 aa12.78□□□□□ -0.36
CNOT2-229ENST00000551179 EVX2Q03828 476 aa12.78□□□□□ -0.36
CNOT2-229ENST00000551179 TEFQ10587 303 aa12.78□□□□□ -0.36
CNOT2-229ENST00000551179 TAF7Q15545 349 aaPredicted RBP12.78□□□□□ -0.36
CNOT2-229ENST00000551179 INTS3Q68E01 1043 aaKnown RBP12.78□□□□□ -0.36
CNOT2-229ENST00000551179 OVOS2A0A0G2JMS6 1433 aa12.78□□□□□ -0.36
CNOT2-229ENST00000551179 MST1RQ04912 1400 aa12.78□□□□□ -0.36
CNOT2-229ENST00000551179 TRPM3Q9HCF6 1732 aaPredicted RBP12.77□□□□□ -0.36
CNOT2-229ENST00000551179 NUCB1Q02818 461 aa12.77□□□□□ -0.37
CNOT2-229ENST00000551179 AKAP4Q5JQC9 854 aa12.77□□□□□ -0.37
CNOT2-229ENST00000551179 ZNF530Q6P9A1 599 aaPredicted RBP12.77□□□□□ -0.37
CNOT2-229ENST00000551179 CHD1LQ86WJ1 897 aa12.77□□□□□ -0.37
CNOT2-229ENST00000551179 FAM212AQ96EL1 285 aa12.77□□□□□ -0.37
CNOT2-229ENST00000551179 ORAI2Q96SN7 254 aa12.77□□□□□ -0.37
CNOT2-229ENST00000551179 TMEM94Q12767 1356 aa12.77□□□□□ -0.37
CNOT2-229ENST00000551179 ABCC6O95255 1503 aa12.77□□□□□ -0.37
CNOT2-229ENST00000551179 HOXB7P09629 217 aa12.76□□□□□ -0.37
CNOT2-229ENST00000551179 RPAP2Q8IXW5 612 aaPredicted RBP12.76□□□□□ -0.37
CNOT2-229ENST00000551179 PXDNLA1KZ92 1463 aa12.76□□□□□ -0.37
CNOT2-229ENST00000551179 ANKRD45Q5TZF3 282 aa12.75□□□□□ -0.37
CNOT2-229ENST00000551179 ARHGEF25Q86VW2 580 aa12.75□□□□□ -0.37
CNOT2-229ENST00000551179 USHBP1Q8N6Y0 703 aa12.75□□□□□ -0.37
CNOT2-229ENST00000551179 ANKRD24Q8TF21 1146 aa12.75□□□□□ -0.37
CNOT2-229ENST00000551179 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
CNOT2-229ENST00000551179 FAM208AQ9UK61 1670 aaKnown RBP12.75□□□□□ -0.37
CNOT2-229ENST00000551179 TNS3Q68CZ2 1445 aa12.74□□□□□ -0.37
CNOT2-229ENST00000551179 GNAI3P08754 354 aa12.74□□□□□ -0.37
CNOT2-229ENST00000551179 XPCQ01831 940 aaPredicted RBP12.74□□□□□ -0.37
CNOT2-229ENST00000551179 FKBP5Q13451 457 aaPredicted RBP12.74□□□□□ -0.37
CNOT2-229ENST00000551179 HDGFL1Q5TGJ6 251 aa12.74□□□□□ -0.37
CNOT2-229ENST00000551179 LMTK3Q96Q04 1460 aa12.73□□□□□ -0.37
CNOT2-229ENST00000551179 SLC4A10Q6U841 1118 aa12.73□□□□□ -0.37
CNOT2-229ENST00000551179 RAPGEF4Q8WZA2 1011 aa12.73□□□□□ -0.37
CNOT2-229ENST00000551179 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
CNOT2-229ENST00000551179 C1orf115Q9H7X2 142 aa12.73□□□□□ -0.37
CNOT2-229ENST00000551179 CIZ1Q9ULV3 898 aaPredicted RBP12.73□□□□□ -0.37
CNOT2-229ENST00000551179 LMO7Q8WWI1 1683 aa12.73□□□□□ -0.37
CNOT2-229ENST00000551179 CAMTA1Q9Y6Y1 1673 aa12.73□□□□□ -0.37
CNOT2-229ENST00000551179 CSB-PGBD3P0DP91 1061 aa12.72□□□□□ -0.37
CNOT2-229ENST00000551179 FLIIQ13045 1269 aa12.72□□□□□ -0.37
CNOT2-229ENST00000551179 GSE1Q14687 1217 aa12.72□□□□□ -0.37
CNOT2-229ENST00000551179 NBPF6Q5VWK0 638 aa12.72□□□□□ -0.37
CNOT2-229ENST00000551179 CASC1Q6TDU7 716 aa12.72□□□□□ -0.37
CNOT2-229ENST00000551179 ANKRD44Q8N8A2 993 aa12.72□□□□□ -0.37
CNOT2-229ENST00000551179 NBPF4Q96M43 638 aa12.72□□□□□ -0.37
CNOT2-229ENST00000551179 HDAC5Q9UQL6 1122 aa12.72□□□□□ -0.37
CNOT2-229ENST00000551179 ALS2Q96Q42 1657 aa12.72□□□□□ -0.37
CNOT2-229ENST00000551179 MED1Q15648 1581 aaPredicted RBP12.72□□□□□ -0.37
CNOT2-229ENST00000551179 CEMIPQ8WUJ3 1361 aa12.71□□□□□ -0.37
CNOT2-229ENST00000551179 TATP17735 454 aaPredicted RBP12.71□□□□□ -0.37
CNOT2-229ENST00000551179 KRT24Q2M2I5 525 aa12.71□□□□□ -0.37
CNOT2-229ENST00000551179 BMP2KLQ5H9B9 411 aa12.71□□□□□ -0.37
CNOT2-229ENST00000551179 LHX8Q68G74 356 aa12.71□□□□□ -0.37
CNOT2-229ENST00000551179 MIS18AQ9NYP9 233 aa12.71□□□□□ -0.37
CNOT2-229ENST00000551179 RGS12O14924 1447 aa12.71□□□□□ -0.38
CNOT2-229ENST00000551179 GNAI2P04899 355 aa12.7□□□□□ -0.38
CNOT2-229ENST00000551179 MFAP1P55081 439 aaKnown RBP12.7□□□□□ -0.38
CNOT2-229ENST00000551179 USP35Q9P2H5 1018 aa12.7□□□□□ -0.38
CNOT2-229ENST00000551179 SPG7Q9UQ90 795 aa12.7□□□□□ -0.38
CNOT2-229ENST00000551179 ERBB3P21860 1342 aa12.69□□□□□ -0.38
CNOT2-229ENST00000551179 BTBD11A6QL63 1104 aa12.69□□□□□ -0.38
CNOT2-229ENST00000551179 NBR1Q14596 966 aa12.69□□□□□ -0.38
CNOT2-229ENST00000551179 IL17REQ8NFR9 667 aa12.69□□□□□ -0.38
CNOT2-229ENST00000551179 TBC1D32Q96NH3 1257 aa12.69□□□□□ -0.38
CNOT2-229ENST00000551179 HSP90AB1P08238 724 aaKnown RBP12.68□□□□□ -0.38
CNOT2-229ENST00000551179 CEP85Q6P2H3 762 aa12.68□□□□□ -0.38
CNOT2-229ENST00000551179 LRRC59Q96AG4 307 aaKnown RBP12.68□□□□□ -0.38
CNOT2-229ENST00000551179 NLRP2Q9NX02 1062 aa12.68□□□□□ -0.38
CNOT2-229ENST00000551179 RNMTO43148 476 aaKnown RBP12.67□□□□□ -0.38
CNOT2-229ENST00000551179 CDC45O75419 566 aa12.67□□□□□ -0.38
CNOT2-229ENST00000551179 HSCBQ8IWL3 235 aa12.67□□□□□ -0.38
CNOT2-229ENST00000551179 C22orf23Q9BZE7 217 aa12.67□□□□□ -0.38
CNOT2-229ENST00000551179 DCTPP1Q9H773 170 aa12.67□□□□□ -0.38
CNOT2-229ENST00000551179 ATP10DQ9P241 1426 aa12.67□□□□□ -0.38
CNOT2-229ENST00000551179 CACNA1FO60840 1977 aa12.67□□□□□ -0.38
CNOT2-229ENST00000551179 KDM3BQ7LBC6 1761 aa12.66□□□□□ -0.38
CNOT2-229ENST00000551179 UBTFL1P0CB47 393 aaPredicted RBP12.66□□□□□ -0.38
CNOT2-229ENST00000551179 ZC3H6P61129 1189 aaKnown RBP12.66□□□□□ -0.38
CNOT2-229ENST00000551179 MEIS3Q99687 375 aa12.66□□□□□ -0.38
CNOT2-229ENST00000551179 N4BP2Q86UW6 1770 aaPredicted RBP12.66□□□□□ -0.38
CNOT2-229ENST00000551179 DDX58O95786 925 aaKnown RBP12.65□□□□□ -0.38
CNOT2-229ENST00000551179 EIF4A1P60842 406 aaKnown RBP12.65□□□□□ -0.38
CNOT2-229ENST00000551179 NECTIN2Q92692 538 aa12.65□□□□□ -0.38
CNOT2-229ENST00000551179 CPDO75976 1380 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms