RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 RTN4Q9NQC3 1192 aaKnown RBP17.61■□□□□ 0.41
CALCOCO1-218ENST00000550804 TTC22Q5TAA0 569 aa17.61■□□□□ 0.41
CALCOCO1-218ENST00000550804 NBPF6Q5VWK0 638 aa17.61■□□□□ 0.41
CALCOCO1-218ENST00000550804 NBPF4Q96M43 638 aa17.61■□□□□ 0.41
CALCOCO1-218ENST00000550804 SLIT3O75094 1523 aa17.61■□□□□ 0.41
CALCOCO1-218ENST00000550804 FLIIQ13045 1269 aa17.6■□□□□ 0.41
CALCOCO1-218ENST00000550804 FKBP5Q13451 457 aaPredicted RBP17.6■□□□□ 0.41
CALCOCO1-218ENST00000550804 CDC45O75419 566 aa17.6■□□□□ 0.41
CALCOCO1-218ENST00000550804 STK31Q9BXU1 1019 aa17.6■□□□□ 0.41
CALCOCO1-218ENST00000550804 SDSP20132 328 aa17.59■□□□□ 0.41
CALCOCO1-218ENST00000550804 LGR6Q9HBX8 967 aa17.59■□□□□ 0.41
CALCOCO1-218ENST00000550804 CHMP5Q9NZZ3 219 aa17.59■□□□□ 0.41
CALCOCO1-218ENST00000550804 TAF7Q15545 349 aaPredicted RBP17.59■□□□□ 0.41
CALCOCO1-218ENST00000550804 TSHZ3Q63HK5 1081 aa17.59■□□□□ 0.41
CALCOCO1-218ENST00000550804 EXOC6BQ9Y2D4 811 aa17.59■□□□□ 0.41
CALCOCO1-218ENST00000550804 ZNF335Q9H4Z2 1342 aaPredicted RBP17.59■□□□□ 0.41
CALCOCO1-218ENST00000550804 MCM4P33991 863 aa17.58■□□□□ 0.4
CALCOCO1-218ENST00000550804 SNX21Q969T3 373 aa17.58■□□□□ 0.4
CALCOCO1-218ENST00000550804 LRRC59Q96AG4 307 aaKnown RBP17.58■□□□□ 0.4
CALCOCO1-218ENST00000550804 PHRF1Q9P1Y6 1649 aaKnown RBP17.58■□□□□ 0.4
CALCOCO1-218ENST00000550804 XIRP1Q702N8 1843 aaKnown RBP17.58■□□□□ 0.4
CALCOCO1-218ENST00000550804 HTATSF1O43719 755 aaKnown RBP17.58■□□□□ 0.4
CALCOCO1-218ENST00000550804 PHAXQ9H814 394 aaKnown RBP17.58■□□□□ 0.4
CALCOCO1-218ENST00000550804 ANO8Q9HCE9 1232 aaPredicted RBP17.58■□□□□ 0.4
CALCOCO1-218ENST00000550804 PNMA6EA0A0J9YXQ4 647 aa17.57■□□□□ 0.4
CALCOCO1-218ENST00000550804 CCT4P50991 539 aaKnown RBP17.57■□□□□ 0.4
CALCOCO1-218ENST00000550804 CCDC30Q5VVM6 783 aa17.57■□□□□ 0.4
CALCOCO1-218ENST00000550804 GZF1Q9H116 711 aaPredicted RBP17.57■□□□□ 0.4
CALCOCO1-218ENST00000550804 NPHP3Q7Z494 1330 aa17.56■□□□□ 0.4
CALCOCO1-218ENST00000550804 DDIT3P35638 169 aa17.56■□□□□ 0.4
CALCOCO1-218ENST00000550804 ALS2Q96Q42 1657 aa17.56■□□□□ 0.4
CALCOCO1-218ENST00000550804 KCNQ3O43525 872 aa17.56■□□□□ 0.4
CALCOCO1-218ENST00000550804 HSP90AB1P08238 724 aaKnown RBP17.56■□□□□ 0.4
CALCOCO1-218ENST00000550804 EIF2S2P20042 333 aaKnown RBP17.56■□□□□ 0.4
CALCOCO1-218ENST00000550804 AXIN2Q9Y2T1 843 aa17.56■□□□□ 0.4
CALCOCO1-218ENST00000550804 GNAI2P04899 355 aa17.55■□□□□ 0.4
CALCOCO1-218ENST00000550804 ARXQ96QS3 562 aa17.55■□□□□ 0.4
CALCOCO1-218ENST00000550804 MAP3K5Q99683 1374 aa17.54■□□□□ 0.4
CALCOCO1-218ENST00000550804 MED1Q15648 1581 aaPredicted RBP17.54■□□□□ 0.4
CALCOCO1-218ENST00000550804 ZC3H6P61129 1189 aaKnown RBP17.54■□□□□ 0.4
CALCOCO1-218ENST00000550804 USP26Q9BXU7 913 aa17.54■□□□□ 0.4
CALCOCO1-218ENST00000550804 BRINP3Q76B58 766 aa17.53■□□□□ 0.4
CALCOCO1-218ENST00000550804 HDGFL1Q5TGJ6 251 aa17.52■□□□□ 0.4
CALCOCO1-218ENST00000550804 ANKRD24Q8TF21 1146 aa17.52■□□□□ 0.4
CALCOCO1-218ENST00000550804 USP44Q9H0E7 712 aa17.52■□□□□ 0.4
CALCOCO1-218ENST00000550804 HMMRO75330 724 aa17.52■□□□□ 0.4
CALCOCO1-218ENST00000550804 ANXA1P04083 346 aa17.52■□□□□ 0.4
CALCOCO1-218ENST00000550804 PDE1AP54750 535 aa17.52■□□□□ 0.4
CALCOCO1-218ENST00000550804 MPRIPQ6WCQ1 1025 aa17.52■□□□□ 0.4
CALCOCO1-218ENST00000550804 LRRFIP2Q9Y608 721 aaKnown RBP17.52■□□□□ 0.4
CALCOCO1-218ENST00000550804 PXDNQ92626 1479 aa17.51■□□□□ 0.39
CALCOCO1-218ENST00000550804 RGPD2P0DJD1 1756 aa17.51■□□□□ 0.39
CALCOCO1-218ENST00000550804 HSP90AA1P07900 732 aaKnown RBP17.51■□□□□ 0.39
CALCOCO1-218ENST00000550804 CABLES1Q8TDN4 633 aa17.51■□□□□ 0.39
CALCOCO1-218ENST00000550804 TNPO1Q92973 898 aaKnown RBP17.51■□□□□ 0.39
CALCOCO1-218ENST00000550804 SPATA31A3Q5VYP0 1347 aa17.51■□□□□ 0.39
CALCOCO1-218ENST00000550804 K7ELQ4 463 aaPredicted RBP17.5■□□□□ 0.39
CALCOCO1-218ENST00000550804 SLAIN2Q9P270 581 aa17.5■□□□□ 0.39
CALCOCO1-218ENST00000550804 TNS3Q68CZ2 1445 aa17.5■□□□□ 0.39
CALCOCO1-218ENST00000550804 TRAK2O60296 914 aa17.49■□□□□ 0.39
CALCOCO1-218ENST00000550804 ATP8B2P98198 1209 aa17.49■□□□□ 0.39
CALCOCO1-218ENST00000550804 EIF4A1P60842 406 aaKnown RBP17.49■□□□□ 0.39
CALCOCO1-218ENST00000550804 NCAPD2Q15021 1401 aa17.48■□□□□ 0.39
CALCOCO1-218ENST00000550804 GNAI3P08754 354 aa17.47■□□□□ 0.39
CALCOCO1-218ENST00000550804 CHPF2Q9P2E5 772 aa17.47■□□□□ 0.39
CALCOCO1-218ENST00000550804 LRRCC1Q9C099 1032 aa17.47■□□□□ 0.39
CALCOCO1-218ENST00000550804 IL1RAPL2Q9NP60 686 aa17.47■□□□□ 0.39
CALCOCO1-218ENST00000550804 ERBB3P21860 1342 aa17.47■□□□□ 0.39
CALCOCO1-218ENST00000550804 ZNF530Q6P9A1 599 aaPredicted RBP17.46■□□□□ 0.39
CALCOCO1-218ENST00000550804 LRRC37A3O60309 1634 aa17.46■□□□□ 0.39
CALCOCO1-218ENST00000550804 CEMIPQ8WUJ3 1361 aa17.46■□□□□ 0.39
CALCOCO1-218ENST00000550804 NBPF7P0C2Y1 421 aaPredicted RBP17.46■□□□□ 0.39
CALCOCO1-218ENST00000550804 PRAMEF22A3QJZ6 481 aa17.45■□□□□ 0.38
CALCOCO1-218ENST00000550804 PI4KAP2A4QPH2 592 aa17.45■□□□□ 0.38
CALCOCO1-218ENST00000550804 BTBD11A6QL63 1104 aa17.45■□□□□ 0.38
CALCOCO1-218ENST00000550804 UBTFL1P0CB47 393 aaPredicted RBP17.45■□□□□ 0.38
CALCOCO1-218ENST00000550804 PI4KAP1Q8N8J0 262 aa17.45■□□□□ 0.38
CALCOCO1-218ENST00000550804 OSBPL3Q9H4L5 887 aa17.45■□□□□ 0.38
CALCOCO1-218ENST00000550804 RGPD5Q99666 1765 aa17.45■□□□□ 0.38
CALCOCO1-218ENST00000550804 RAB3GAP1Q15042 981 aa17.45■□□□□ 0.38
CALCOCO1-218ENST00000550804 PLEKHO1Q53GL0 409 aaPredicted RBP17.45■□□□□ 0.38
CALCOCO1-218ENST00000550804 BABAM1Q9NWV8 329 aa17.45■□□□□ 0.38
CALCOCO1-218ENST00000550804 UNC5CLQ8IV45 518 aa17.44■□□□□ 0.38
CALCOCO1-218ENST00000550804 SSFA2P28290 1259 aa17.44■□□□□ 0.38
CALCOCO1-218ENST00000550804 SOS2Q07890 1332 aaPredicted RBP17.44■□□□□ 0.38
CALCOCO1-218ENST00000550804 TEFQ10587 303 aa17.44■□□□□ 0.38
CALCOCO1-218ENST00000550804 AMOTQ4VCS5 1084 aa17.44■□□□□ 0.38
CALCOCO1-218ENST00000550804 SALL3Q9BXA9 1300 aa17.44■□□□□ 0.38
CALCOCO1-218ENST00000550804 MX1P20591 662 aa17.43■□□□□ 0.38
CALCOCO1-218ENST00000550804 RABEP1Q15276 862 aa17.43■□□□□ 0.38
CALCOCO1-218ENST00000550804 CHRNA2Q15822 529 aa17.43■□□□□ 0.38
CALCOCO1-218ENST00000550804 AKAP4Q5JQC9 854 aa17.43■□□□□ 0.38
CALCOCO1-218ENST00000550804 CASC1Q6TDU7 716 aa17.43■□□□□ 0.38
CALCOCO1-218ENST00000550804 PPP1R42Q7Z4L9 355 aa17.43■□□□□ 0.38
CALCOCO1-218ENST00000550804 RILPL2Q969X0 211 aa17.43■□□□□ 0.38
CALCOCO1-218ENST00000550804 NUTM1Q86Y26 1132 aa17.42■□□□□ 0.38
CALCOCO1-218ENST00000550804 TRIM6-TRIM34B2RNG4 842 aa17.42■□□□□ 0.38
CALCOCO1-218ENST00000550804 ERC2O15083 957 aa17.42■□□□□ 0.38
CALCOCO1-218ENST00000550804 SRCIN1Q9C0H9 1055 aa17.42■□□□□ 0.38
CALCOCO1-218ENST00000550804 CAMTA1Q9Y6Y1 1673 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms