RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-218ENST00000550692 TUBGCP6Q96RT7 1819 aa15.06■□□□□ 0
BRF1-218ENST00000550692 RNMTO43148 476 aaKnown RBP15.05■□□□□ -0
BRF1-218ENST00000550692 ATP6V1AP38606 617 aa15.05■□□□□ -0
BRF1-218ENST00000550692 ITPK1Q13572 414 aa15.05■□□□□ -0
BRF1-218ENST00000550692 PHACTR3Q96KR7 559 aa15.05■□□□□ -0
BRF1-218ENST00000550692 SLC4A9Q96Q91 983 aa15.05■□□□□ -0
BRF1-218ENST00000550692 QSER1Q2KHR3 1735 aa15.04■□□□□ -0
BRF1-218ENST00000550692 PTGER2P43116 358 aa15.04■□□□□ -0
BRF1-218ENST00000550692 RALBP1Q15311 655 aa15.04■□□□□ -0
BRF1-218ENST00000550692 LINC00116Q8NCU8 138 aa15.04■□□□□ -0
BRF1-218ENST00000550692 COL23A1Q86Y22 540 aaPredicted RBP15.03■□□□□ -0
BRF1-218ENST00000550692 GAS2L2Q8NHY3 880 aa15.03■□□□□ -0
BRF1-218ENST00000550692 RBM42Q9BTD8 480 aaKnown RBP15.03■□□□□ -0
BRF1-218ENST00000550692 SLC52A2Q9HAB3 445 aa15.03■□□□□ -0
BRF1-218ENST00000550692 PPP1R1BQ9UD71 204 aaPredicted RBP15.03■□□□□ -0
BRF1-218ENST00000550692 C4BP0C0L5 1744 aa15.03■□□□□ -0
BRF1-218ENST00000550692 VIRMAQ69YN4 1812 aaKnown RBP15.02■□□□□ -0
BRF1-218ENST00000550692 FCHSD2O94868 740 aa15.02■□□□□ -0
BRF1-218ENST00000550692 HMGB2P26583 209 aaKnown RBP15.02■□□□□ -0
BRF1-218ENST00000550692 SMIM5Q71RC9 77 aa15.02■□□□□ -0
BRF1-218ENST00000550692 AMIGO3Q86WK7 504 aa15.02■□□□□ -0
BRF1-218ENST00000550692 SLC16A10Q8TF71 515 aa15.02■□□□□ -0
BRF1-218ENST00000550692 SGIP1Q9BQI5 828 aa15.02■□□□□ -0
BRF1-218ENST00000550692 MSH5O43196 834 aa15.01□□□□□ -0.01
BRF1-218ENST00000550692 PTCD1O75127 700 aaKnown RBP15.01□□□□□ -0.01
BRF1-218ENST00000550692 IL17REQ8NFR9 667 aa15.01□□□□□ -0.01
BRF1-218ENST00000550692 AK7Q96M32 723 aa15.01□□□□□ -0.01
BRF1-218ENST00000550692 MAP3K5Q99683 1374 aa15□□□□□ -0.01
BRF1-218ENST00000550692 ADAMTS7Q9UKP4 1686 aa15□□□□□ -0.01
BRF1-218ENST00000550692 GNAT3A8MTJ3 354 aa15□□□□□ -0.01
BRF1-218ENST00000550692 SLC39A6Q13433 755 aa15□□□□□ -0.01
BRF1-218ENST00000550692 MRC1P22897 1456 aa14.99□□□□□ -0.01
BRF1-218ENST00000550692 UBR3Q6ZT12 1888 aa14.98□□□□□ -0.01
BRF1-218ENST00000550692 PHF14O94880 888 aa14.98□□□□□ -0.01
BRF1-218ENST00000550692 DIEXFQ68CQ4 756 aaKnown RBP14.98□□□□□ -0.01
BRF1-218ENST00000550692 FLAD1Q8NFF5 587 aa14.98□□□□□ -0.01
BRF1-218ENST00000550692 MYBBP1AQ9BQG0 1328 aaKnown RBP14.97□□□□□ -0.01
BRF1-218ENST00000550692 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.97□□□□□ -0.01
BRF1-218ENST00000550692 GNPATO15228 680 aa14.97□□□□□ -0.01
BRF1-218ENST00000550692 ZNF831Q5JPB2 1677 aa14.97□□□□□ -0.01
BRF1-218ENST00000550692 SSFA2P28290 1259 aa14.96□□□□□ -0.01
BRF1-218ENST00000550692 TEFQ10587 303 aa14.96□□□□□ -0.01
BRF1-218ENST00000550692 MSL1Q68DK7 614 aa14.96□□□□□ -0.01
BRF1-218ENST00000550692 ARXQ96QS3 562 aa14.96□□□□□ -0.01
BRF1-218ENST00000550692 PRKRIP1Q9H875 184 aaPredicted RBP14.96□□□□□ -0.01
BRF1-218ENST00000550692 POLD1P28340 1107 aa14.95□□□□□ -0.02
BRF1-218ENST00000550692 RC3H1Q5TC82 1133 aaKnown RBP14.95□□□□□ -0.02
BRF1-218ENST00000550692 DNAJC10Q8IXB1 793 aa14.95□□□□□ -0.02
BRF1-218ENST00000550692 PLEKHF1Q96S99 279 aa14.95□□□□□ -0.02
BRF1-218ENST00000550692 FHDC1Q9C0D6 1143 aaPredicted RBP14.95□□□□□ -0.02
BRF1-218ENST00000550692 CEMIPQ8WUJ3 1361 aa14.95□□□□□ -0.02
BRF1-218ENST00000550692 COL5A3P25940 1745 aaPredicted RBP14.95□□□□□ -0.02
BRF1-218ENST00000550692 COL24A1Q17RW2 1714 aa14.95□□□□□ -0.02
BRF1-218ENST00000550692 MYH14Q7Z406 1995 aaKnown RBP14.94□□□□□ -0.02
BRF1-218ENST00000550692 CNTNAP4Q9C0A0 1308 aa14.94□□□□□ -0.02
BRF1-218ENST00000550692 YY1P25490 414 aa14.94□□□□□ -0.02
BRF1-218ENST00000550692 DCTN1Q14203 1278 aa14.94□□□□□ -0.02
BRF1-218ENST00000550692 MCM10Q7L590 875 aa14.94□□□□□ -0.02
BRF1-218ENST00000550692 RTCBQ9Y3I0 505 aaKnown RBP14.94□□□□□ -0.02
BRF1-218ENST00000550692 KCPQ6ZWJ8 1503 aa14.93□□□□□ -0.02
BRF1-218ENST00000550692 TJP1Q07157 1748 aa14.93□□□□□ -0.02
BRF1-218ENST00000550692 NEFMP07197 916 aa14.93□□□□□ -0.02
BRF1-218ENST00000550692 CRKLP46109 303 aaKnown RBP14.93□□□□□ -0.02
BRF1-218ENST00000550692 SYT17Q9BSW7 474 aa14.93□□□□□ -0.02
BRF1-218ENST00000550692 ANP32CO43423 234 aa14.92□□□□□ -0.02
BRF1-218ENST00000550692 RPS6KA4O75676 772 aa14.92□□□□□ -0.02
BRF1-218ENST00000550692 TRAPPC3LQ5T215 181 aa14.92□□□□□ -0.02
BRF1-218ENST00000550692 ZNF790Q6PG37 636 aa14.92□□□□□ -0.02
BRF1-218ENST00000550692 TTC5Q8N0Z6 440 aa14.92□□□□□ -0.02
BRF1-218ENST00000550692 RTF1Q92541 710 aaKnown RBP14.92□□□□□ -0.02
BRF1-218ENST00000550692 SIPA1L3O60292 1781 aaPredicted RBP14.92□□□□□ -0.02
BRF1-218ENST00000550692 KCNQ3O43525 872 aa14.91□□□□□ -0.02
BRF1-218ENST00000550692 KLHL34Q8N239 644 aa14.91□□□□□ -0.02
BRF1-218ENST00000550692 ARHGEF1Q92888 912 aaKnown RBP14.91□□□□□ -0.02
BRF1-218ENST00000550692 ZNF496Q96IT1 587 aaPredicted RBP14.91□□□□□ -0.02
BRF1-218ENST00000550692 CICQ96RK0 1608 aaPredicted RBP14.91□□□□□ -0.02
BRF1-218ENST00000550692 UTRNP46939 3433 aa14.91□□□□□ -0.02
BRF1-218ENST00000550692 BTBD11A6QL63 1104 aa14.9□□□□□ -0.02
BRF1-218ENST00000550692 HTATSF1O43719 755 aaKnown RBP14.9□□□□□ -0.02
BRF1-218ENST00000550692 CYP19A1P11511 503 aaPredicted RBP14.9□□□□□ -0.02
BRF1-218ENST00000550692 INTS5Q6P9B9 1019 aaKnown RBP14.9□□□□□ -0.02
BRF1-218ENST00000550692 VSIG10Q8N0Z9 540 aa14.9□□□□□ -0.02
BRF1-218ENST00000550692 PNNQ9H307 717 aaKnown RBP14.9□□□□□ -0.02
BRF1-218ENST00000550692 UBR2Q8IWV8 1755 aa14.9□□□□□ -0.02
BRF1-218ENST00000550692 DLG5Q8TDM6 1919 aa14.9□□□□□ -0.02
BRF1-218ENST00000550692 MAPK8IP3Q9UPT6 1336 aa14.9□□□□□ -0.02
BRF1-218ENST00000550692 ADRA2BP18089 450 aa14.89□□□□□ -0.03
BRF1-218ENST00000550692 NFE2L2Q16236 605 aa14.89□□□□□ -0.03
BRF1-218ENST00000550692 CCDC87Q9NVE4 849 aa14.88□□□□□ -0.03
BRF1-218ENST00000550692 HEG1Q9ULI3 1381 aa14.87□□□□□ -0.03
BRF1-218ENST00000550692 RFC4P35249 363 aa14.87□□□□□ -0.03
BRF1-218ENST00000550692 CCDC146Q8IYE0 955 aa14.87□□□□□ -0.03
BRF1-218ENST00000550692 FMNL2Q96PY5 1086 aa14.87□□□□□ -0.03
BRF1-218ENST00000550692 THUMPD2Q9BTF0 503 aaKnown RBP14.87□□□□□ -0.03
BRF1-218ENST00000550692 ADAMTS8Q9UP79 889 aa14.87□□□□□ -0.03
BRF1-218ENST00000550692 ZBTB1Q9Y2K1 713 aa14.87□□□□□ -0.03
BRF1-218ENST00000550692 WDR43Q15061 677 aaKnown RBP eCLIP14.86□□□□□ -0.03
BRF1-218ENST00000550692 TAF7Q15545 349 aaPredicted RBP14.86□□□□□ -0.03
BRF1-218ENST00000550692 MIS18AQ9NYP9 233 aa14.86□□□□□ -0.03
BRF1-218ENST00000550692 SRP68Q9UHB9 627 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms