RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 SLC10A3P09131 477 aa8.68□□□□□ -1.02
DEPDC4-209ENST00000550587 XPCQ01831 940 aaPredicted RBP8.68□□□□□ -1.02
DEPDC4-209ENST00000550587 RBM26Q5T8P6 1007 aaKnown RBP8.68□□□□□ -1.02
DEPDC4-209ENST00000550587 WAPLQ7Z5K2 1190 aa8.68□□□□□ -1.02
DEPDC4-209ENST00000550587 KDM2AQ9Y2K7 1162 aa8.68□□□□□ -1.02
DEPDC4-209ENST00000550587 PRAG1Q86YV5 1406 aa8.68□□□□□ -1.02
DEPDC4-209ENST00000550587 PPLO60437 1756 aa8.68□□□□□ -1.02
DEPDC4-209ENST00000550587 NRG2O14511 850 aaPredicted RBP8.67□□□□□ -1.02
DEPDC4-209ENST00000550587 ACTN4O43707 911 aaKnown RBP8.67□□□□□ -1.02
DEPDC4-209ENST00000550587 KMT5BQ4FZB7 885 aa8.67□□□□□ -1.02
DEPDC4-209ENST00000550587 LMOD2Q6P5Q4 547 aa8.67□□□□□ -1.02
DEPDC4-209ENST00000550587 TRAF7Q6Q0C0 670 aa8.67□□□□□ -1.02
DEPDC4-209ENST00000550587 KRT28Q7Z3Y7 464 aa8.67□□□□□ -1.02
DEPDC4-209ENST00000550587 UNC5CLQ8IV45 518 aa8.67□□□□□ -1.02
DEPDC4-209ENST00000550587 ADGRF5Q8IZF2 1346 aa8.67□□□□□ -1.02
DEPDC4-209ENST00000550587 ABCC11Q96J66 1382 aa8.67□□□□□ -1.02
DEPDC4-209ENST00000550587 TMUB1Q9BVT8 246 aa8.67□□□□□ -1.02
DEPDC4-209ENST00000550587 CCDC9Q9Y3X0 531 aaKnown RBP8.67□□□□□ -1.02
DEPDC4-209ENST00000550587 CDC42BPGQ6DT37 1551 aa8.66□□□□□ -1.02
DEPDC4-209ENST00000550587 ATRNO75882 1429 aa8.66□□□□□ -1.02
DEPDC4-209ENST00000550587 RNF223E7ERA6 249 aa8.66□□□□□ -1.02
DEPDC4-209ENST00000550587 PLCB2Q00722 1185 aa8.66□□□□□ -1.02
DEPDC4-209ENST00000550587 TMEM132EQ6IEE7 984 aa8.66□□□□□ -1.02
DEPDC4-209ENST00000550587 PXYLP1Q8TE99 480 aa8.66□□□□□ -1.02
DEPDC4-209ENST00000550587 SIRT1Q96EB6 747 aa8.66□□□□□ -1.02
DEPDC4-209ENST00000550587 POGKQ9P215 609 aa8.66□□□□□ -1.02
DEPDC4-209ENST00000550587 COL22A1Q8NFW1 1626 aaPredicted RBP8.65□□□□□ -1.02
DEPDC4-209ENST00000550587 SPATA31A3Q5VYP0 1347 aa8.65□□□□□ -1.02
DEPDC4-209ENST00000550587 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.65□□□□□ -1.02
DEPDC4-209ENST00000550587 TESPA1A2RU30 521 aaPredicted RBP8.65□□□□□ -1.02
DEPDC4-209ENST00000550587 PPEF1O14829 653 aaPredicted RBP8.65□□□□□ -1.02
DEPDC4-209ENST00000550587 MYT1Q01538 1121 aa8.65□□□□□ -1.02
DEPDC4-209ENST00000550587 FECHP22830 423 aa8.64□□□□□ -1.03
DEPDC4-209ENST00000550587 EMID1Q96A84 441 aaPredicted RBP8.64□□□□□ -1.03
DEPDC4-209ENST00000550587 PDZRN3Q9UPQ7 1066 aa8.64□□□□□ -1.03
DEPDC4-209ENST00000550587 MYOM2P54296 1465 aa8.64□□□□□ -1.03
DEPDC4-209ENST00000550587 BCL9LQ86UU0 1499 aa8.64□□□□□ -1.03
DEPDC4-209ENST00000550587 PXDNQ92626 1479 aa8.64□□□□□ -1.03
DEPDC4-209ENST00000550587 TECPR2O15040 1411 aa8.63□□□□□ -1.03
DEPDC4-209ENST00000550587 KIF1AQ12756 1690 aa8.63□□□□□ -1.03
DEPDC4-209ENST00000550587 S1PR4O95977 384 aa8.63□□□□□ -1.03
DEPDC4-209ENST00000550587 OATP04181 439 aa8.63□□□□□ -1.03
DEPDC4-209ENST00000550587 EIF4G2P78344 907 aaKnown RBP eCLIP8.63□□□□□ -1.03
DEPDC4-209ENST00000550587 HIC1Q14526 733 aa8.63□□□□□ -1.03
DEPDC4-209ENST00000550587 C14orf93Q9H972 538 aaKnown RBP8.63□□□□□ -1.03
DEPDC4-209ENST00000550587 MARF1Q9Y4F3 1742 aaKnown RBP8.63□□□□□ -1.03
DEPDC4-209ENST00000550587 YTHDC2Q9H6S0 1430 aaKnown RBP8.63□□□□□ -1.03
DEPDC4-209ENST00000550587 ARHGEF10O15013 1369 aa8.62□□□□□ -1.03
DEPDC4-209ENST00000550587 SAFB2Q14151 953 aaKnown RBP eCLIP8.62□□□□□ -1.03
DEPDC4-209ENST00000550587 METTL3Q86U44 580 aaKnown RBP8.62□□□□□ -1.03
DEPDC4-209ENST00000550587 BLMP54132 1417 aaPredicted RBP8.62□□□□□ -1.03
DEPDC4-209ENST00000550587 GPRASP1Q5JY77 1395 aa8.61□□□□□ -1.03
DEPDC4-209ENST00000550587 SLC19A1P41440 591 aa8.61□□□□□ -1.03
DEPDC4-209ENST00000550587 VPS72Q15906 364 aa8.61□□□□□ -1.03
DEPDC4-209ENST00000550587 SEPT12Q8IYM1 358 aa8.61□□□□□ -1.03
DEPDC4-209ENST00000550587 PRAM1Q96QH2 718 aa8.61□□□□□ -1.03
DEPDC4-209ENST00000550587 RALGAPBQ86X10 1494 aa8.61□□□□□ -1.03
DEPDC4-209ENST00000550587 PIK3C2GO75747 1445 aa8.61□□□□□ -1.03
DEPDC4-209ENST00000550587 TNS3Q68CZ2 1445 aa8.61□□□□□ -1.03
DEPDC4-209ENST00000550587 EIF3AQ14152 1382 aaKnown RBP8.61□□□□□ -1.03
DEPDC4-209ENST00000550587 IFT172Q9UG01 1749 aa8.6□□□□□ -1.03
DEPDC4-209ENST00000550587 GPR37O15354 613 aa8.6□□□□□ -1.03
DEPDC4-209ENST00000550587 HSPA5P11021 654 aaKnown RBP8.6□□□□□ -1.03
DEPDC4-209ENST00000550587 BAG6P46379 1132 aa8.6□□□□□ -1.03
DEPDC4-209ENST00000550587 NBPF1Q3BBV0 1214 aa8.6□□□□□ -1.03
DEPDC4-209ENST00000550587 PUS10Q3MIT2 529 aaKnown RBP8.6□□□□□ -1.03
DEPDC4-209ENST00000550587 CFAP70Q5T0N1 1121 aa8.6□□□□□ -1.03
DEPDC4-209ENST00000550587 KRT27Q7Z3Y8 459 aa8.6□□□□□ -1.03
DEPDC4-209ENST00000550587 CARD11Q9BXL7 1154 aa8.6□□□□□ -1.03
DEPDC4-209ENST00000550587 TRPM1Q7Z4N2 1603 aa8.6□□□□□ -1.03
DEPDC4-209ENST00000550587 KNDC1Q76NI1 1749 aa8.6□□□□□ -1.03
DEPDC4-209ENST00000550587 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.6□□□□□ -1.03
DEPDC4-209ENST00000550587 SBNO1A3KN83 1393 aa8.6□□□□□ -1.03
DEPDC4-209ENST00000550587 PLEKHH1Q9ULM0 1364 aa8.6□□□□□ -1.03
DEPDC4-209ENST00000550587 SLIT2O94813 1529 aa8.59□□□□□ -1.03
DEPDC4-209ENST00000550587 NRXN1Q9ULB1 1477 aa8.59□□□□□ -1.03
DEPDC4-209ENST00000550587 GNPATO15228 680 aa8.59□□□□□ -1.03
DEPDC4-209ENST00000550587 NR1I2O75469 434 aa8.59□□□□□ -1.03
DEPDC4-209ENST00000550587 SMYD5Q6GMV2 418 aa8.59□□□□□ -1.03
DEPDC4-209ENST00000550587 TRIM67Q6ZTA4 783 aa8.59□□□□□ -1.03
DEPDC4-209ENST00000550587 NGDNQ8NEJ9 315 aaKnown RBP8.59□□□□□ -1.03
DEPDC4-209ENST00000550587 PMFBP1Q8TBY8 1022 aa8.59□□□□□ -1.03
DEPDC4-209ENST00000550587 CABLES1Q8TDN4 633 aa8.59□□□□□ -1.03
DEPDC4-209ENST00000550587 NLRP7Q8WX94 980 aa8.59□□□□□ -1.03
DEPDC4-209ENST00000550587 FMN2Q9NZ56 1722 aa8.59□□□□□ -1.03
DEPDC4-209ENST00000550587 KIAA1210Q9ULL0 1709 aa8.59□□□□□ -1.03
DEPDC4-209ENST00000550587 ROCK2O75116 1388 aaKnown RBP8.59□□□□□ -1.03
DEPDC4-209ENST00000550587 ADH1BP00325 375 aa8.58□□□□□ -1.04
DEPDC4-209ENST00000550587 LIAT1Q6ZQX7 453 aa8.58□□□□□ -1.04
DEPDC4-209ENST00000550587 SCUBE3Q8IX30 993 aa8.58□□□□□ -1.04
DEPDC4-209ENST00000550587 ANKLE1Q8NAG6 615 aa8.58□□□□□ -1.04
DEPDC4-209ENST00000550587 TRAK1Q9UPV9 953 aa8.58□□□□□ -1.04
DEPDC4-209ENST00000550587 USP32Q8NFA0 1604 aa8.58□□□□□ -1.04
DEPDC4-209ENST00000550587 ANKARQ7Z5J8 1434 aa8.57□□□□□ -1.04
DEPDC4-209ENST00000550587 FAM83GA6ND36 823 aa8.57□□□□□ -1.04
DEPDC4-209ENST00000550587 SPRYD7Q5W111 196 aa8.57□□□□□ -1.04
DEPDC4-209ENST00000550587 HIRIP3Q9BW71 556 aaPredicted RBP8.57□□□□□ -1.04
DEPDC4-209ENST00000550587 BTG4Q9NY30 223 aa8.57□□□□□ -1.04
DEPDC4-209ENST00000550587 USP47Q96K76 1375 aa8.57□□□□□ -1.04
DEPDC4-209ENST00000550587 DEFB132Q7Z7B7 95 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms