RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 NFE2L2Q16236 605 aa23.13■■□□□ 1.29
CDK4-207ENST00000550419 CCDC184Q52MB2 194 aa23.13■■□□□ 1.29
CDK4-207ENST00000550419 CCNL1Q9UK58 526 aaPredicted RBP23.13■■□□□ 1.29
CDK4-207ENST00000550419 RTF1Q92541 710 aaKnown RBP23.12■■□□□ 1.29
CDK4-207ENST00000550419 RUNDC1Q96C34 613 aa23.12■■□□□ 1.29
CDK4-207ENST00000550419 VIRMAQ69YN4 1812 aaKnown RBP23.12■■□□□ 1.29
CDK4-207ENST00000550419 TEFQ10587 303 aa23.11■■□□□ 1.29
CDK4-207ENST00000550419 ZNF831Q5JPB2 1677 aa23.11■■□□□ 1.29
CDK4-207ENST00000550419 LOC102724428A0A0B4J2F2 783 aa23.1■■□□□ 1.29
CDK4-207ENST00000550419 SIK1P57059 783 aa23.1■■□□□ 1.29
CDK4-207ENST00000550419 PNISRQ8TF01 805 aaKnown RBP23.1■■□□□ 1.29
CDK4-207ENST00000550419 ANO8Q9HCE9 1232 aaPredicted RBP23.1■■□□□ 1.29
CDK4-207ENST00000550419 MRS2Q9HD23 443 aa23.1■■□□□ 1.29
CDK4-207ENST00000550419 STK32BQ9NY57 414 aa23.09■■□□□ 1.29
CDK4-207ENST00000550419 R3HDM1Q15032 1099 aaKnown RBP23.08■■□□□ 1.29
CDK4-207ENST00000550419 SLC15A2Q16348 729 aa23.08■■□□□ 1.29
CDK4-207ENST00000550419 SIPA1L3O60292 1781 aaPredicted RBP23.07■■□□□ 1.28
CDK4-207ENST00000550419 AKT1S1Q96B36 256 aa23.07■■□□□ 1.28
CDK4-207ENST00000550419 TMPOP42166 694 aaKnown RBP23.06■■□□□ 1.28
CDK4-207ENST00000550419 C5P01031 1676 aa23.06■■□□□ 1.28
CDK4-207ENST00000550419 KCNQ4P56696 695 aa23.05■■□□□ 1.28
CDK4-207ENST00000550419 MCM10Q7L590 875 aa23.05■■□□□ 1.28
CDK4-207ENST00000550419 CCDC146Q8IYE0 955 aa23.05■■□□□ 1.28
CDK4-207ENST00000550419 DLG5Q8TDM6 1919 aa23.05■■□□□ 1.28
CDK4-207ENST00000550419 CICQ96RK0 1608 aaPredicted RBP23.04■■□□□ 1.28
CDK4-207ENST00000550419 PSDA5PKW4 1024 aaPredicted RBP23.04■■□□□ 1.28
CDK4-207ENST00000550419 ATP6V1AP38606 617 aa23.04■■□□□ 1.28
CDK4-207ENST00000550419 RIPK4P57078 832 aa23.04■■□□□ 1.28
CDK4-207ENST00000550419 LMOD3Q0VAK6 560 aa23.04■■□□□ 1.28
CDK4-207ENST00000550419 TAF1LQ8IZX4 1826 aa23.03■■□□□ 1.28
CDK4-207ENST00000550419 ZNF827Q17R98 1081 aa23.03■■□□□ 1.28
CDK4-207ENST00000550419 SLC4A9Q96Q91 983 aa23.03■■□□□ 1.28
CDK4-207ENST00000550419 ITPK1Q13572 414 aa23.02■■□□□ 1.28
CDK4-207ENST00000550419 DCTN1Q14203 1278 aa23.02■■□□□ 1.28
CDK4-207ENST00000550419 ZNF790Q6PG37 636 aa23.02■■□□□ 1.28
CDK4-207ENST00000550419 RBM42Q9BTD8 480 aaKnown RBP23.02■■□□□ 1.28
CDK4-207ENST00000550419 KCPQ6ZWJ8 1503 aa23.02■■□□□ 1.28
CDK4-207ENST00000550419 PTCD1O75127 700 aaKnown RBP23.01■■□□□ 1.27
CDK4-207ENST00000550419 VSIG10Q8N0Z9 540 aa23.01■■□□□ 1.27
CDK4-207ENST00000550419 UBR2Q8IWV8 1755 aa23.01■■□□□ 1.27
CDK4-207ENST00000550419 QSER1Q2KHR3 1735 aa23■■□□□ 1.27
CDK4-207ENST00000550419 BTBD11A6QL63 1104 aa23■■□□□ 1.27
CDK4-207ENST00000550419 SLC39A6Q13433 755 aa23■■□□□ 1.27
CDK4-207ENST00000550419 TAF7Q15545 349 aaPredicted RBP23■■□□□ 1.27
CDK4-207ENST00000550419 TTC5Q8N0Z6 440 aa23■■□□□ 1.27
CDK4-207ENST00000550419 C4BP0C0L5 1744 aa22.99■■□□□ 1.27
CDK4-207ENST00000550419 LINC00116Q8NCU8 138 aa22.99■■□□□ 1.27
CDK4-207ENST00000550419 RC3H1Q5TC82 1133 aaKnown RBP22.98■■□□□ 1.27
CDK4-207ENST00000550419 DIEXFQ68CQ4 756 aaKnown RBP22.98■■□□□ 1.27
CDK4-207ENST00000550419 TFCP2L1Q9NZI6 479 aa22.98■■□□□ 1.27
CDK4-207ENST00000550419 CCER2I3L3R5 266 aa22.97■■□□□ 1.27
CDK4-207ENST00000550419 APAF1O14727 1248 aa22.97■■□□□ 1.27
CDK4-207ENST00000550419 COL5A3P25940 1745 aaPredicted RBP22.96■■□□□ 1.27
CDK4-207ENST00000550419 CASZ1Q86V15 1759 aa22.96■■□□□ 1.27
CDK4-207ENST00000550419 NCBP3Q53F19 620 aaKnown RBP22.96■■□□□ 1.27
CDK4-207ENST00000550419 FLAD1Q8NFF5 587 aa22.96■■□□□ 1.27
CDK4-207ENST00000550419 BABAM1Q9NWV8 329 aa22.96■■□□□ 1.27
CDK4-207ENST00000550419 TRIM35Q9UPQ4 493 aa22.96■■□□□ 1.27
CDK4-207ENST00000550419 RRP7AQ9Y3A4 280 aaKnown RBP22.96■■□□□ 1.27
CDK4-207ENST00000550419 CNTNAP4Q9C0A0 1308 aa22.96■■□□□ 1.27
CDK4-207ENST00000550419 TJP1Q07157 1748 aa22.95■■□□□ 1.26
CDK4-207ENST00000550419 PNPLA7Q6ZV29 1317 aa22.95■■□□□ 1.26
CDK4-207ENST00000550419 ZNF496Q96IT1 587 aaPredicted RBP22.95■■□□□ 1.26
CDK4-207ENST00000550419 AK7Q96M32 723 aa22.95■■□□□ 1.26
CDK4-207ENST00000550419 FMNL2Q96PY5 1086 aa22.95■■□□□ 1.26
CDK4-207ENST00000550419 HEG1Q9ULI3 1381 aa22.94■■□□□ 1.26
CDK4-207ENST00000550419 NEUROD2Q15784 382 aa22.94■■□□□ 1.26
CDK4-207ENST00000550419 THUMPD2Q9BTF0 503 aaKnown RBP22.94■■□□□ 1.26
CDK4-207ENST00000550419 SLC16A10Q8TF71 515 aa22.93■■□□□ 1.26
CDK4-207ENST00000550419 TEX13AQ9BXU3 409 aaPredicted RBP22.93■■□□□ 1.26
CDK4-207ENST00000550419 SSFA2P28290 1259 aa22.92■■□□□ 1.26
CDK4-207ENST00000550419 TUBGCP6Q96RT7 1819 aa22.92■■□□□ 1.26
CDK4-207ENST00000550419 SRCAPQ6ZRS2 3230 aa22.91■■□□□ 1.26
CDK4-207ENST00000550419 DNAJC10Q8IXB1 793 aa22.91■■□□□ 1.26
CDK4-207ENST00000550419 PDGFDQ9GZP0 370 aaPredicted RBP22.91■■□□□ 1.26
CDK4-207ENST00000550419 KDM3BQ7LBC6 1761 aa22.91■■□□□ 1.26
CDK4-207ENST00000550419 UBR3Q6ZT12 1888 aa22.9■■□□□ 1.26
CDK4-207ENST00000550419 KCNQ3O43525 872 aa22.9■■□□□ 1.26
CDK4-207ENST00000550419 CYP19A1P11511 503 aaPredicted RBP22.9■■□□□ 1.26
CDK4-207ENST00000550419 CRKLP46109 303 aaKnown RBP22.9■■□□□ 1.26
CDK4-207ENST00000550419 CCDC27Q2M243 656 aa22.9■■□□□ 1.26
CDK4-207ENST00000550419 LRP5O75197 1615 aa22.9■■□□□ 1.26
CDK4-207ENST00000550419 GNPATO15228 680 aa22.89■■□□□ 1.25
CDK4-207ENST00000550419 RPS6KA4O75676 772 aa22.89■■□□□ 1.25
CDK4-207ENST00000550419 FAM9BQ8IZU0 186 aa22.89■■□□□ 1.25
CDK4-207ENST00000550419 STARD3NLO95772 234 aa22.88■■□□□ 1.25
CDK4-207ENST00000550419 ADRA2BP18089 450 aa22.88■■□□□ 1.25
CDK4-207ENST00000550419 CALD1Q05682 793 aaKnown RBP22.88■■□□□ 1.25
CDK4-207ENST00000550419 COL23A1Q86Y22 540 aaPredicted RBP22.88■■□□□ 1.25
CDK4-207ENST00000550419 MTFR1LQ9H019 292 aa22.88■■□□□ 1.25
CDK4-207ENST00000550419 MIS18AQ9NYP9 233 aa22.88■■□□□ 1.25
CDK4-207ENST00000550419 RTCBQ9Y3I0 505 aaKnown RBP22.88■■□□□ 1.25
CDK4-207ENST00000550419 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.87■■□□□ 1.25
CDK4-207ENST00000550419 CHL1O00533 1208 aa22.87■■□□□ 1.25
CDK4-207ENST00000550419 SNRPA1P09661 255 aaKnown RBP22.87■■□□□ 1.25
CDK4-207ENST00000550419 INTS5Q6P9B9 1019 aaKnown RBP22.87■■□□□ 1.25
CDK4-207ENST00000550419 NGEFQ8N5V2 710 aa22.87■■□□□ 1.25
CDK4-207ENST00000550419 SPON1Q9HCB6 807 aa22.87■■□□□ 1.25
CDK4-207ENST00000550419 CCDC87Q9NVE4 849 aa22.87■■□□□ 1.25
CDK4-207ENST00000550419 AMIGO3Q86WK7 504 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms