RNA–Protein interactions for RNA: ENST00000550385.1

CHPT1-206, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 754 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-206ENST00000550385 CHL1O00533 1208 aa13.77□□□□□ -0.21
CHPT1-206ENST00000550385 ONECUT3O60422 494 aaPredicted RBP13.77□□□□□ -0.21
CHPT1-206ENST00000550385 ATRNO75882 1429 aa13.77□□□□□ -0.21
CHPT1-206ENST00000550385 FAM98CQ17RN3 349 aaKnown RBP13.77□□□□□ -0.21
CHPT1-206ENST00000550385 CEMIPQ8WUJ3 1361 aa13.77□□□□□ -0.21
CHPT1-206ENST00000550385 THUMPD2Q9BTF0 503 aaKnown RBP13.77□□□□□ -0.21
CHPT1-206ENST00000550385 LGR6Q9HBX8 967 aa13.77□□□□□ -0.21
CHPT1-206ENST00000550385 PKD1L3Q7Z443 1732 aa13.76□□□□□ -0.21
CHPT1-206ENST00000550385 ERVV-2B6SEH9 535 aa13.76□□□□□ -0.21
CHPT1-206ENST00000550385 CT47B1P0C2W7 299 aaPredicted RBP13.76□□□□□ -0.21
CHPT1-206ENST00000550385 TSPYL4Q9UJ04 414 aa13.75□□□□□ -0.21
CHPT1-206ENST00000550385 FANCIQ9NVI1 1328 aa13.74□□□□□ -0.21
CHPT1-206ENST00000550385 A0A0G2JS52 829 aa13.74□□□□□ -0.21
CHPT1-206ENST00000550385 CABP4P57796 275 aa13.74□□□□□ -0.21
CHPT1-206ENST00000550385 MYT1Q01538 1121 aa13.74□□□□□ -0.21
CHPT1-206ENST00000550385 SLC52A2Q9HAB3 445 aa13.74□□□□□ -0.21
CHPT1-206ENST00000550385 MBIPQ9NS73 344 aa13.74□□□□□ -0.21
CHPT1-206ENST00000550385 BTBD11A6QL63 1104 aa13.73□□□□□ -0.21
CHPT1-206ENST00000550385 RBM6P78332 1123 aaKnown RBP13.73□□□□□ -0.21
CHPT1-206ENST00000550385 ZNF428Q96B54 188 aa13.73□□□□□ -0.21
CHPT1-206ENST00000550385 CHMP4AQ9BY43 222 aa13.73□□□□□ -0.21
CHPT1-206ENST00000550385 TNS2Q63HR2 1409 aa13.73□□□□□ -0.21
CHPT1-206ENST00000550385 TSR2Q969E8 191 aaKnown RBP13.72□□□□□ -0.21
CHPT1-206ENST00000550385 SOS1Q07889 1333 aaPredicted RBP13.71□□□□□ -0.21
CHPT1-206ENST00000550385 EXOSC9Q06265 439 aaKnown RBP13.71□□□□□ -0.21
CHPT1-206ENST00000550385 NFATC2IPQ8NCF5 419 aa13.71□□□□□ -0.21
CHPT1-206ENST00000550385 RCAN3Q9UKA8 241 aa13.71□□□□□ -0.21
CHPT1-206ENST00000550385 WNK3Q9BYP7 1800 aa13.7□□□□□ -0.22
CHPT1-206ENST00000550385 RXRBP28702 533 aa13.7□□□□□ -0.22
CHPT1-206ENST00000550385 MKRN4PQ13434 485 aaPredicted RBP13.7□□□□□ -0.22
CHPT1-206ENST00000550385 SEPT12Q8IYM1 358 aa13.7□□□□□ -0.22
CHPT1-206ENST00000550385 MARCH10Q8NA82 808 aaPredicted RBP13.7□□□□□ -0.22
CHPT1-206ENST00000550385 MIS18AQ9NYP9 233 aa13.7□□□□□ -0.22
CHPT1-206ENST00000550385 KDM6AO15550 1401 aaPredicted RBP13.7□□□□□ -0.22
CHPT1-206ENST00000550385 TMOD3Q9NYL9 352 aa13.69□□□□□ -0.22
CHPT1-206ENST00000550385 ADAMTS7Q9UKP4 1686 aa13.69□□□□□ -0.22
CHPT1-206ENST00000550385 TWISTNBQ3B726 338 aaPredicted RBP13.68□□□□□ -0.22
CHPT1-206ENST00000550385 TTC5Q8N0Z6 440 aa13.68□□□□□ -0.22
CHPT1-206ENST00000550385 SCN11AQ9UI33 1791 aa13.68□□□□□ -0.22
CHPT1-206ENST00000550385 GLI3P10071 1580 aa13.67□□□□□ -0.22
CHPT1-206ENST00000550385 VAMP4O75379 141 aa13.67□□□□□ -0.22
CHPT1-206ENST00000550385 ZNF790Q6PG37 636 aa13.67□□□□□ -0.22
CHPT1-206ENST00000550385 LRRC37A3O60309 1634 aa13.67□□□□□ -0.22
CHPT1-206ENST00000550385 HOXB7P09629 217 aa13.66□□□□□ -0.22
CHPT1-206ENST00000550385 EIF4A1P60842 406 aaKnown RBP13.66□□□□□ -0.22
CHPT1-206ENST00000550385 ALDH1L2Q3SY69 923 aa13.66□□□□□ -0.22
CHPT1-206ENST00000550385 ILDR1Q86SU0 546 aaPredicted RBP13.66□□□□□ -0.22
CHPT1-206ENST00000550385 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.66□□□□□ -0.22
CHPT1-206ENST00000550385 C8orf58Q8NAV2 365 aa13.66□□□□□ -0.22
CHPT1-206ENST00000550385 SUPT16HQ9Y5B9 1047 aaKnown RBP13.66□□□□□ -0.22
CHPT1-206ENST00000550385 SHANK3Q9BYB0 1731 aa13.66□□□□□ -0.22
CHPT1-206ENST00000550385 MRC1P22897 1456 aa13.66□□□□□ -0.22
CHPT1-206ENST00000550385 PRIM1P49642 420 aaKnown RBP13.65□□□□□ -0.22
CHPT1-206ENST00000550385 RARSP54136 660 aaKnown RBP13.65□□□□□ -0.22
CHPT1-206ENST00000550385 FMNL2Q96PY5 1086 aa13.65□□□□□ -0.22
CHPT1-206ENST00000550385 THSD7AQ9UPZ6 1657 aa13.65□□□□□ -0.22
CHPT1-206ENST00000550385 ELL2O00472 640 aaPredicted RBP13.64□□□□□ -0.23
CHPT1-206ENST00000550385 KRT27Q7Z3Y8 459 aa13.64□□□□□ -0.23
CHPT1-206ENST00000550385 PIGBQ92521 554 aa13.64□□□□□ -0.23
CHPT1-206ENST00000550385 SYTL4Q96C24 671 aaPredicted RBP13.64□□□□□ -0.23
CHPT1-206ENST00000550385 RGS17Q9UGC6 210 aaPredicted RBP13.64□□□□□ -0.23
CHPT1-206ENST00000550385 BCL9O00512 1426 aa13.64□□□□□ -0.23
CHPT1-206ENST00000550385 VIRMAQ69YN4 1812 aaKnown RBP13.63□□□□□ -0.23
CHPT1-206ENST00000550385 SLC39A6Q13433 755 aa13.63□□□□□ -0.23
CHPT1-206ENST00000550385 CCDC30Q5VVM6 783 aa13.63□□□□□ -0.23
CHPT1-206ENST00000550385 FAM196AQ6ZSG2 479 aa13.63□□□□□ -0.23
CHPT1-206ENST00000550385 TSPYL6Q8N831 410 aa13.63□□□□□ -0.23
CHPT1-206ENST00000550385 SPDYE2BA6NHP3 402 aa13.62□□□□□ -0.23
CHPT1-206ENST00000550385 KCNQ3O43525 872 aa13.62□□□□□ -0.23
CHPT1-206ENST00000550385 GIGYF1O75420 1035 aaPredicted RBP13.62□□□□□ -0.23
CHPT1-206ENST00000550385 SNRPA1P09661 255 aaKnown RBP13.62□□□□□ -0.23
CHPT1-206ENST00000550385 SPDYE6P0CI01 402 aa13.62□□□□□ -0.23
CHPT1-206ENST00000550385 BRPF1P55201 1214 aaPredicted RBP13.62□□□□□ -0.23
CHPT1-206ENST00000550385 SPDYE2Q495Y8 402 aa13.62□□□□□ -0.23
CHPT1-206ENST00000550385 SMARCC1Q92922 1105 aaPredicted RBP13.62□□□□□ -0.23
CHPT1-206ENST00000550385 TEX13AQ9BXU3 409 aaPredicted RBP13.62□□□□□ -0.23
CHPT1-206ENST00000550385 HEG1Q9ULI3 1381 aa13.61□□□□□ -0.23
CHPT1-206ENST00000550385 SIPA1L3O60292 1781 aaPredicted RBP13.61□□□□□ -0.23
CHPT1-206ENST00000550385 IPO8O15397 1037 aaKnown RBP13.61□□□□□ -0.23
CHPT1-206ENST00000550385 NEFLP07196 543 aa13.61□□□□□ -0.23
CHPT1-206ENST00000550385 VSIG10Q8N0Z9 540 aa13.61□□□□□ -0.23
CHPT1-206ENST00000550385 ACSBG1Q96GR2 724 aa13.61□□□□□ -0.23
CHPT1-206ENST00000550385 STK31Q9BXU1 1019 aa13.61□□□□□ -0.23
CHPT1-206ENST00000550385 SMC4Q9NTJ3 1288 aa13.61□□□□□ -0.23
CHPT1-206ENST00000550385 RNF123Q5XPI4 1314 aa13.61□□□□□ -0.23
CHPT1-206ENST00000550385 MS4A1P11836 297 aa13.6□□□□□ -0.23
CHPT1-206ENST00000550385 KRT24Q2M2I5 525 aa13.6□□□□□ -0.23
CHPT1-206ENST00000550385 POTEAQ6S8J7 498 aa13.6□□□□□ -0.23
CHPT1-206ENST00000550385 SSH1Q8WYL5 1049 aa13.6□□□□□ -0.23
CHPT1-206ENST00000550385 AKT1S1Q96B36 256 aa13.6□□□□□ -0.23
CHPT1-206ENST00000550385 ZNF496Q96IT1 587 aaPredicted RBP13.6□□□□□ -0.23
CHPT1-206ENST00000550385 ATG3Q9NT62 314 aa13.6□□□□□ -0.23
CHPT1-206ENST00000550385 KAT6BQ8WYB5 2073 aa13.6□□□□□ -0.23
CHPT1-206ENST00000550385 KDM3BQ7LBC6 1761 aa13.6□□□□□ -0.23
CHPT1-206ENST00000550385 BCAR3O75815 825 aa13.59□□□□□ -0.23
CHPT1-206ENST00000550385 RRP1P56182 461 aaKnown RBP13.59□□□□□ -0.23
CHPT1-206ENST00000550385 HDGFL1Q5TGJ6 251 aa13.59□□□□□ -0.23
CHPT1-206ENST00000550385 ASAP1Q9ULH1 1129 aa13.59□□□□□ -0.23
CHPT1-206ENST00000550385 KIF16BQ96L93 1317 aa13.59□□□□□ -0.23
CHPT1-206ENST00000550385 PTCD1O75127 700 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms