RNA–Protein interactions for RNA: ENST00000549527.1

AC027288.3-201, humanhuman

TSL 2

Gene AC027288.3, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027288.3-201ENST00000549527 LINC00116Q8NCU8 138 aa12.02□□□□□ -0.49
AC027288.3-201ENST00000549527 PANK3Q9H999 370 aa12.02□□□□□ -0.49
AC027288.3-201ENST00000549527 TMOD3Q9NYL9 352 aa12.02□□□□□ -0.49
AC027288.3-201ENST00000549527 DLEC1Q9Y238 1755 aa12.02□□□□□ -0.49
AC027288.3-201ENST00000549527 SMARCC1Q92922 1105 aaPredicted RBP12.01□□□□□ -0.49
AC027288.3-201ENST00000549527 CACNA1SQ13698 1873 aa12.01□□□□□ -0.49
AC027288.3-201ENST00000549527 SCN7AQ01118 1682 aa12□□□□□ -0.49
AC027288.3-201ENST00000549527 LOC102724428A0A0B4J2F2 783 aa12□□□□□ -0.49
AC027288.3-201ENST00000549527 YBX3P16989 372 aaKnown RBP eCLIP12□□□□□ -0.49
AC027288.3-201ENST00000549527 SIK1P57059 783 aa12□□□□□ -0.49
AC027288.3-201ENST00000549527 NKX1-1Q15270 411 aaPredicted RBP12□□□□□ -0.49
AC027288.3-201ENST00000549527 AEBP1Q8IUX7 1158 aa12□□□□□ -0.49
AC027288.3-201ENST00000549527 IFNL2Q8IZJ0 200 aa12□□□□□ -0.49
AC027288.3-201ENST00000549527 ASAP1Q9ULH1 1129 aa12□□□□□ -0.49
AC027288.3-201ENST00000549527 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.99□□□□□ -0.49
AC027288.3-201ENST00000549527 GNPATO15228 680 aa11.99□□□□□ -0.49
AC027288.3-201ENST00000549527 ITPK1Q13572 414 aa11.99□□□□□ -0.49
AC027288.3-201ENST00000549527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.99□□□□□ -0.49
AC027288.3-201ENST00000549527 COL3A1P02461 1466 aaPredicted RBP11.99□□□□□ -0.49
AC027288.3-201ENST00000549527 KIF7Q2M1P5 1343 aa11.98□□□□□ -0.49
AC027288.3-201ENST00000549527 ZNF530Q6P9A1 599 aaPredicted RBP11.98□□□□□ -0.49
AC027288.3-201ENST00000549527 WWC3Q9ULE0 1092 aa11.98□□□□□ -0.49
AC027288.3-201ENST00000549527 KCPQ6ZWJ8 1503 aa11.97□□□□□ -0.49
AC027288.3-201ENST00000549527 PXDNLA1KZ92 1463 aa11.97□□□□□ -0.49
AC027288.3-201ENST00000549527 C10orf71Q711Q0 1435 aa11.97□□□□□ -0.49
AC027288.3-201ENST00000549527 SSFA2P28290 1259 aa11.97□□□□□ -0.49
AC027288.3-201ENST00000549527 BCORQ6W2J9 1755 aa11.97□□□□□ -0.49
AC027288.3-201ENST00000549527 ATP10DQ9P241 1426 aa11.96□□□□□ -0.49
AC027288.3-201ENST00000549527 DLG5Q8TDM6 1919 aa11.96□□□□□ -0.49
AC027288.3-201ENST00000549527 ATP6V1AP38606 617 aa11.96□□□□□ -0.49
AC027288.3-201ENST00000549527 MORC1Q86VD1 984 aa11.96□□□□□ -0.49
AC027288.3-201ENST00000549527 FLAD1Q8NFF5 587 aa11.96□□□□□ -0.49
AC027288.3-201ENST00000549527 ATG3Q9NT62 314 aa11.96□□□□□ -0.49
AC027288.3-201ENST00000549527 TIAM2Q8IVF5 1701 aa11.96□□□□□ -0.49
AC027288.3-201ENST00000549527 ADCY9O60503 1353 aa11.95□□□□□ -0.5
AC027288.3-201ENST00000549527 COL11A2P13942 1736 aaPredicted RBP11.95□□□□□ -0.5
AC027288.3-201ENST00000549527 NRXN2Q9P2S2 1712 aa11.95□□□□□ -0.5
AC027288.3-201ENST00000549527 SLC4A9Q96Q91 983 aa11.95□□□□□ -0.5
AC027288.3-201ENST00000549527 CCDC88AQ3V6T2 1871 aa11.95□□□□□ -0.5
AC027288.3-201ENST00000549527 SBF1O95248 1867 aa11.94□□□□□ -0.5
AC027288.3-201ENST00000549527 ANKRD31Q8N7Z5 1873 aa11.94□□□□□ -0.5
AC027288.3-201ENST00000549527 KNSTRNQ9Y448 316 aa11.94□□□□□ -0.5
AC027288.3-201ENST00000549527 LAMB4A4D0S4 1761 aa11.94□□□□□ -0.5
AC027288.3-201ENST00000549527 AMER1Q5JTC6 1135 aaPredicted RBP11.93□□□□□ -0.5
AC027288.3-201ENST00000549527 SULT6B1Q6IMI4 303 aa11.93□□□□□ -0.5
AC027288.3-201ENST00000549527 DCAF5Q96JK2 942 aa11.93□□□□□ -0.5
AC027288.3-201ENST00000549527 RBM42Q9BTD8 480 aaKnown RBP11.93□□□□□ -0.5
AC027288.3-201ENST00000549527 CNTNAP4Q9C0A0 1308 aa11.92□□□□□ -0.5
AC027288.3-201ENST00000549527 HSP90AB1P08238 724 aaKnown RBP11.92□□□□□ -0.5
AC027288.3-201ENST00000549527 PLEKHO1Q53GL0 409 aaPredicted RBP11.92□□□□□ -0.5
AC027288.3-201ENST00000549527 C1orf141Q5JVX7 400 aa11.92□□□□□ -0.5
AC027288.3-201ENST00000549527 CD2APQ9Y5K6 639 aa11.92□□□□□ -0.5
AC027288.3-201ENST00000549527 SENP3-EIF4A1A0A087X0R7 540 aa11.91□□□□□ -0.5
AC027288.3-201ENST00000549527 ERVV-2B6SEH9 535 aa11.91□□□□□ -0.5
AC027288.3-201ENST00000549527 GIGYF1O75420 1035 aaPredicted RBP11.91□□□□□ -0.5
AC027288.3-201ENST00000549527 MMP10P09238 476 aa11.91□□□□□ -0.5
AC027288.3-201ENST00000549527 CABP4P57796 275 aa11.91□□□□□ -0.5
AC027288.3-201ENST00000549527 TNRC6CQ9HCJ0 1690 aaKnown RBP11.91□□□□□ -0.5
AC027288.3-201ENST00000549527 ARFGEF2Q9Y6D5 1785 aa11.9□□□□□ -0.5
AC027288.3-201ENST00000549527 HMGB2P26583 209 aaKnown RBP11.9□□□□□ -0.5
AC027288.3-201ENST00000549527 IL13P35225 146 aa11.9□□□□□ -0.5
AC027288.3-201ENST00000549527 AMOTQ4VCS5 1084 aa11.9□□□□□ -0.5
AC027288.3-201ENST00000549527 CC2D1BQ5T0F9 858 aaKnown RBP11.9□□□□□ -0.5
AC027288.3-201ENST00000549527 RTCBQ9Y3I0 505 aaKnown RBP11.9□□□□□ -0.5
AC027288.3-201ENST00000549527 GRIN3BO60391 1043 aa11.89□□□□□ -0.51
AC027288.3-201ENST00000549527 PTCD1O75127 700 aaKnown RBP11.89□□□□□ -0.51
AC027288.3-201ENST00000549527 HMOX1P09601 288 aa11.89□□□□□ -0.51
AC027288.3-201ENST00000549527 MTHFSP49914 203 aa11.89□□□□□ -0.51
AC027288.3-201ENST00000549527 CNGB1Q14028 1251 aaPredicted RBP11.89□□□□□ -0.51
AC027288.3-201ENST00000549527 C1QTNF8P60827 252 aa11.88□□□□□ -0.51
AC027288.3-201ENST00000549527 KDM3BQ7LBC6 1761 aa11.87□□□□□ -0.51
AC027288.3-201ENST00000549527 WDR90Q96KV7 1748 aa11.87□□□□□ -0.51
AC027288.3-201ENST00000549527 CRKLP46109 303 aaKnown RBP11.87□□□□□ -0.51
AC027288.3-201ENST00000549527 ZNF526Q8TF50 670 aaPredicted RBP11.87□□□□□ -0.51
AC027288.3-201ENST00000549527 CEP350Q5VT06 3117 aa11.87□□□□□ -0.51
AC027288.3-201ENST00000549527 GYS1P13807 737 aa11.86□□□□□ -0.51
AC027288.3-201ENST00000549527 ADRA2BP18089 450 aa11.86□□□□□ -0.51
AC027288.3-201ENST00000549527 NFATC2IPQ8NCF5 419 aa11.86□□□□□ -0.51
AC027288.3-201ENST00000549527 ARHGEF1Q92888 912 aaKnown RBP11.86□□□□□ -0.51
AC027288.3-201ENST00000549527 SRP68Q9UHB9 627 aaKnown RBP11.86□□□□□ -0.51
AC027288.3-201ENST00000549527 COL15A1P39059 1388 aa11.86□□□□□ -0.51
AC027288.3-201ENST00000549527 DICER1Q9UPY3 1922 aaKnown RBP11.86□□□□□ -0.51
AC027288.3-201ENST00000549527 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
AC027288.3-201ENST00000549527 RPS6KA4O75676 772 aa11.85□□□□□ -0.51
AC027288.3-201ENST00000549527 RFC4P35249 363 aa11.85□□□□□ -0.51
AC027288.3-201ENST00000549527 AKAP4Q5JQC9 854 aa11.85□□□□□ -0.51
AC027288.3-201ENST00000549527 TRAPPC3LQ5T215 181 aa11.85□□□□□ -0.51
AC027288.3-201ENST00000549527 NPC1L1Q9UHC9 1359 aa11.84□□□□□ -0.51
AC027288.3-201ENST00000549527 PER1O15534 1290 aaPredicted RBP11.84□□□□□ -0.51
AC027288.3-201ENST00000549527 RC3H1Q5TC82 1133 aaKnown RBP11.84□□□□□ -0.51
AC027288.3-201ENST00000549527 SLC52A2Q9HAB3 445 aa11.84□□□□□ -0.51
AC027288.3-201ENST00000549527 FER1L6Q2WGJ9 1857 aa11.83□□□□□ -0.52
AC027288.3-201ENST00000549527 DIAPH1O60610 1272 aaKnown RBP11.83□□□□□ -0.52
AC027288.3-201ENST00000549527 DDR1Q08345 913 aa11.83□□□□□ -0.52
AC027288.3-201ENST00000549527 SLC39A6Q13433 755 aa11.83□□□□□ -0.52
AC027288.3-201ENST00000549527 MTHFSDQ2M296 383 aaKnown RBP11.83□□□□□ -0.52
AC027288.3-201ENST00000549527 DNAJC10Q8IXB1 793 aa11.83□□□□□ -0.52
AC027288.3-201ENST00000549527 LGR6Q9HBX8 967 aa11.83□□□□□ -0.52
AC027288.3-201ENST00000549527 GPBP1L1Q9HC44 474 aaPredicted RBP11.83□□□□□ -0.52
AC027288.3-201ENST00000549527 CCDC87Q9NVE4 849 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms