RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 UNC5CLQ8IV45 518 aa8.44□□□□□ -1.06
CASC18-202ENST00000548557 RAPGEF4Q8WZA2 1011 aa8.44□□□□□ -1.06
CASC18-202ENST00000548557 CDCA7LQ96GN5 454 aa8.44□□□□□ -1.06
CASC18-202ENST00000548557 NWD2Q9ULI1 1742 aa8.43□□□□□ -1.06
CASC18-202ENST00000548557 CCDC27Q2M243 656 aa8.43□□□□□ -1.06
CASC18-202ENST00000548557 AMOTQ4VCS5 1084 aa8.43□□□□□ -1.06
CASC18-202ENST00000548557 USHBP1Q8N6Y0 703 aa8.43□□□□□ -1.06
CASC18-202ENST00000548557 EXOC6Q8TAG9 804 aa8.43□□□□□ -1.06
CASC18-202ENST00000548557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.43□□□□□ -1.06
CASC18-202ENST00000548557 THRAP3Q9Y2W1 955 aaKnown RBP8.43□□□□□ -1.06
CASC18-202ENST00000548557 TMPOP42166 694 aaKnown RBP8.43□□□□□ -1.06
CASC18-202ENST00000548557 GAS2L2Q8NHY3 880 aa8.43□□□□□ -1.06
CASC18-202ENST00000548557 PHACTR3Q96KR7 559 aa8.43□□□□□ -1.06
CASC18-202ENST00000548557 PLCH1Q4KWH8 1693 aa8.43□□□□□ -1.06
CASC18-202ENST00000548557 TATP17735 454 aaPredicted RBP8.42□□□□□ -1.06
CASC18-202ENST00000548557 NFE2L2Q16236 605 aa8.42□□□□□ -1.06
CASC18-202ENST00000548557 PLEKHO1Q53GL0 409 aaPredicted RBP8.42□□□□□ -1.06
CASC18-202ENST00000548557 BCL9LQ86UU0 1499 aa8.42□□□□□ -1.06
CASC18-202ENST00000548557 LMOD3Q0VAK6 560 aa8.42□□□□□ -1.06
CASC18-202ENST00000548557 CDCA7Q9BWT1 371 aaPredicted RBP8.42□□□□□ -1.06
CASC18-202ENST00000548557 IL2RBP14784 551 aa8.41□□□□□ -1.06
CASC18-202ENST00000548557 RIPK4P57078 832 aa8.41□□□□□ -1.06
CASC18-202ENST00000548557 VPS72Q15906 364 aa8.41□□□□□ -1.06
CASC18-202ENST00000548557 USP21Q9UK80 565 aa8.41□□□□□ -1.06
CASC18-202ENST00000548557 SPATA31A1Q5TZJ5 1347 aa8.41□□□□□ -1.06
CASC18-202ENST00000548557 SPATA31A5Q5VU36 1347 aa8.41□□□□□ -1.06
CASC18-202ENST00000548557 SPATA31A7Q8IWB4 1347 aa8.41□□□□□ -1.06
CASC18-202ENST00000548557 HTATSF1O43719 755 aaKnown RBP8.41□□□□□ -1.06
CASC18-202ENST00000548557 MTHFSDQ2M296 383 aaKnown RBP8.41□□□□□ -1.06
CASC18-202ENST00000548557 PLCD4Q9BRC7 762 aa8.41□□□□□ -1.06
CASC18-202ENST00000548557 SPG7Q9UQ90 795 aa8.41□□□□□ -1.06
CASC18-202ENST00000548557 NRAPQ86VF7 1730 aa8.41□□□□□ -1.06
CASC18-202ENST00000548557 RGPD2P0DJD1 1756 aa8.4□□□□□ -1.06
CASC18-202ENST00000548557 TEX2Q8IWB9 1127 aa8.4□□□□□ -1.06
CASC18-202ENST00000548557 AFF2P51816 1311 aa8.4□□□□□ -1.06
CASC18-202ENST00000548557 ZNF521Q96K83 1311 aa8.4□□□□□ -1.06
CASC18-202ENST00000548557 NEUROD2Q15784 382 aa8.4□□□□□ -1.07
CASC18-202ENST00000548557 BARGINQ6ZT62 677 aa8.4□□□□□ -1.07
CASC18-202ENST00000548557 WWC1Q8IX03 1113 aa8.4□□□□□ -1.07
CASC18-202ENST00000548557 NAP1L2Q9ULW6 460 aaPredicted RBP8.4□□□□□ -1.07
CASC18-202ENST00000548557 OVOS2A0A0G2JMS6 1433 aa8.39□□□□□ -1.07
CASC18-202ENST00000548557 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.39□□□□□ -1.07
CASC18-202ENST00000548557 CALD1Q05682 793 aaKnown RBP8.39□□□□□ -1.07
CASC18-202ENST00000548557 WDR63Q8IWG1 891 aa8.39□□□□□ -1.07
CASC18-202ENST00000548557 RRP7AQ9Y3A4 280 aaKnown RBP8.39□□□□□ -1.07
CASC18-202ENST00000548557 MEGF6O75095 1541 aa8.39□□□□□ -1.07
CASC18-202ENST00000548557 GNAT3A8MTJ3 354 aa8.39□□□□□ -1.07
CASC18-202ENST00000548557 AKAP4Q5JQC9 854 aa8.39□□□□□ -1.07
CASC18-202ENST00000548557 TRPC5Q9UL62 973 aaPredicted RBP8.39□□□□□ -1.07
CASC18-202ENST00000548557 TRIM35Q9UPQ4 493 aa8.39□□□□□ -1.07
CASC18-202ENST00000548557 DISP2A7MBM2 1401 aa8.39□□□□□ -1.07
CASC18-202ENST00000548557 C1orf141Q5JVX7 400 aa8.38□□□□□ -1.07
CASC18-202ENST00000548557 SPRYD3Q8NCJ5 442 aa8.38□□□□□ -1.07
CASC18-202ENST00000548557 ZCRB1Q8TBF4 217 aaKnown RBP8.38□□□□□ -1.07
CASC18-202ENST00000548557 RTF1Q92541 710 aaKnown RBP8.38□□□□□ -1.07
CASC18-202ENST00000548557 NOP58Q9Y2X3 529 aaKnown RBP8.38□□□□□ -1.07
CASC18-202ENST00000548557 TCERG1O14776 1098 aaKnown RBP8.38□□□□□ -1.07
CASC18-202ENST00000548557 GOLGA2Q08379 1002 aa8.38□□□□□ -1.07
CASC18-202ENST00000548557 ZNF772Q68DY9 489 aaPredicted RBP8.38□□□□□ -1.07
CASC18-202ENST00000548557 ZNF530Q6P9A1 599 aaPredicted RBP8.38□□□□□ -1.07
CASC18-202ENST00000548557 IFNL2Q8IZJ0 200 aa8.38□□□□□ -1.07
CASC18-202ENST00000548557 IL16Q14005 1332 aa8.38□□□□□ -1.07
CASC18-202ENST00000548557 MAP3K5Q99683 1374 aa8.38□□□□□ -1.07
CASC18-202ENST00000548557 PLIN1O60240 522 aa8.37□□□□□ -1.07
CASC18-202ENST00000548557 HSP90AB1P08238 724 aaKnown RBP8.37□□□□□ -1.07
CASC18-202ENST00000548557 GJD4Q96KN9 370 aaPredicted RBP8.37□□□□□ -1.07
CASC18-202ENST00000548557 PCDH11XQ9BZA7 1347 aa8.37□□□□□ -1.07
CASC18-202ENST00000548557 PCDH11YQ9BZA8 1340 aa8.37□□□□□ -1.07
CASC18-202ENST00000548557 ATRNO75882 1429 aa8.37□□□□□ -1.07
CASC18-202ENST00000548557 PARP4Q9UKK3 1724 aaKnown RBP8.37□□□□□ -1.07
CASC18-202ENST00000548557 EXOC5O00471 708 aa8.37□□□□□ -1.07
CASC18-202ENST00000548557 ANP32AP39687 249 aaKnown RBP8.37□□□□□ -1.07
CASC18-202ENST00000548557 E9PSI1 815 aa8.36□□□□□ -1.07
CASC18-202ENST00000548557 PHKG2P15735 406 aa8.36□□□□□ -1.07
CASC18-202ENST00000548557 IPO9Q96P70 1041 aaKnown RBP8.36□□□□□ -1.07
CASC18-202ENST00000548557 QTRT2Q9H974 415 aaKnown RBP8.36□□□□□ -1.07
CASC18-202ENST00000548557 PKD1L3Q7Z443 1732 aa8.36□□□□□ -1.07
CASC18-202ENST00000548557 ONECUT3O60422 494 aaPredicted RBP8.36□□□□□ -1.07
CASC18-202ENST00000548557 CACNB1Q02641 598 aaPredicted RBP8.36□□□□□ -1.07
CASC18-202ENST00000548557 DUSP27Q5VZP5 1158 aa8.36□□□□□ -1.07
CASC18-202ENST00000548557 CRBNQ96SW2 442 aa8.36□□□□□ -1.07
CASC18-202ENST00000548557 CEMIPQ8WUJ3 1361 aa8.35□□□□□ -1.07
CASC18-202ENST00000548557 CYP27B1O15528 508 aa8.35□□□□□ -1.07
CASC18-202ENST00000548557 MS4A1P11836 297 aa8.35□□□□□ -1.07
CASC18-202ENST00000548557 PTMSP20962 102 aa8.35□□□□□ -1.07
CASC18-202ENST00000548557 NKX1-1Q15270 411 aaPredicted RBP8.35□□□□□ -1.07
CASC18-202ENST00000548557 DDB1Q16531 1140 aa8.35□□□□□ -1.07
CASC18-202ENST00000548557 DCAF5Q96JK2 942 aa8.35□□□□□ -1.07
CASC18-202ENST00000548557 APBB1O00213 710 aa8.35□□□□□ -1.07
CASC18-202ENST00000548557 SLFN5Q08AF3 891 aa8.35□□□□□ -1.07
CASC18-202ENST00000548557 IL17REQ8NFR9 667 aa8.35□□□□□ -1.07
CASC18-202ENST00000548557 MYH16Q9H6N6 1097 aa8.35□□□□□ -1.07
CASC18-202ENST00000548557 TNS2Q63HR2 1409 aa8.34□□□□□ -1.07
CASC18-202ENST00000548557 GNAI1P63096 354 aa8.34□□□□□ -1.07
CASC18-202ENST00000548557 POLA2Q14181 598 aa8.34□□□□□ -1.07
CASC18-202ENST00000548557 FAM98CQ17RN3 349 aaKnown RBP8.34□□□□□ -1.07
CASC18-202ENST00000548557 MCM10Q7L590 875 aa8.34□□□□□ -1.07
CASC18-202ENST00000548557 TRMT2AQ8IZ69 625 aaKnown RBP8.34□□□□□ -1.07
CASC18-202ENST00000548557 IFT57Q9NWB7 429 aa8.34□□□□□ -1.07
CASC18-202ENST00000548557 BABAM1Q9NWV8 329 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms