RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 SLC4A9Q96Q91 983 aa17.05■□□□□ 0.32
GCN1-204ENST00000548132 ASAP1Q9ULH1 1129 aa17.05■□□□□ 0.32
GCN1-204ENST00000548132 SMIM5Q71RC9 77 aa17.04■□□□□ 0.32
GCN1-204ENST00000548132 LOC102724428A0A0B4J2F2 783 aa17.03■□□□□ 0.32
GCN1-204ENST00000548132 SIK1P57059 783 aa17.03■□□□□ 0.32
GCN1-204ENST00000548132 SMARCC1Q92922 1105 aaPredicted RBP17.03■□□□□ 0.32
GCN1-204ENST00000548132 ATG3Q9NT62 314 aa17.03■□□□□ 0.32
GCN1-204ENST00000548132 TMOD3Q9NYL9 352 aa17.03■□□□□ 0.32
GCN1-204ENST00000548132 MSL1Q68DK7 614 aa17.02■□□□□ 0.32
GCN1-204ENST00000548132 ZNF530Q6P9A1 599 aaPredicted RBP17.02■□□□□ 0.32
GCN1-204ENST00000548132 NLGN2Q8NFZ4 835 aa17.02■□□□□ 0.32
GCN1-204ENST00000548132 SULT6B1Q6IMI4 303 aa17■□□□□ 0.31
GCN1-204ENST00000548132 N4BP2Q86UW6 1770 aaPredicted RBP17■□□□□ 0.31
GCN1-204ENST00000548132 MTHFSP49914 203 aa16.99■□□□□ 0.31
GCN1-204ENST00000548132 DCAF5Q96JK2 942 aa16.99■□□□□ 0.31
GCN1-204ENST00000548132 YY1P25490 414 aa16.98■□□□□ 0.31
GCN1-204ENST00000548132 CC2D1BQ5T0F9 858 aaKnown RBP16.98■□□□□ 0.31
GCN1-204ENST00000548132 SCN7AQ01118 1682 aa16.97■□□□□ 0.31
GCN1-204ENST00000548132 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.97■□□□□ 0.31
GCN1-204ENST00000548132 ERVV-2B6SEH9 535 aa16.97■□□□□ 0.31
GCN1-204ENST00000548132 POLD1P28340 1107 aa16.97■□□□□ 0.31
GCN1-204ENST00000548132 PLEKHO1Q53GL0 409 aaPredicted RBP16.97■□□□□ 0.31
GCN1-204ENST00000548132 AK7Q96M32 723 aa16.97■□□□□ 0.31
GCN1-204ENST00000548132 PHF14O94880 888 aa16.96■□□□□ 0.31
GCN1-204ENST00000548132 SSFA2P28290 1259 aa16.96■□□□□ 0.31
GCN1-204ENST00000548132 AMOTQ4VCS5 1084 aa16.96■□□□□ 0.31
GCN1-204ENST00000548132 DLG5Q8TDM6 1919 aa16.96■□□□□ 0.3
GCN1-204ENST00000548132 NRXN2Q9P2S2 1712 aa16.95■□□□□ 0.3
GCN1-204ENST00000548132 C10orf71Q711Q0 1435 aa16.95■□□□□ 0.3
GCN1-204ENST00000548132 CNTNAP4Q9C0A0 1308 aa16.95■□□□□ 0.3
GCN1-204ENST00000548132 AFDNP55196 1824 aaKnown RBP16.94■□□□□ 0.3
GCN1-204ENST00000548132 GNPATO15228 680 aa16.94■□□□□ 0.3
GCN1-204ENST00000548132 HSP90AB1P08238 724 aaKnown RBP16.94■□□□□ 0.3
GCN1-204ENST00000548132 HMOX1P09601 288 aa16.94■□□□□ 0.3
GCN1-204ENST00000548132 ATP6V1AP38606 617 aa16.94■□□□□ 0.3
GCN1-204ENST00000548132 PXDNLA1KZ92 1463 aa16.93■□□□□ 0.3
GCN1-204ENST00000548132 BCORQ6W2J9 1755 aa16.93■□□□□ 0.3
GCN1-204ENST00000548132 DLEC1Q9Y238 1755 aa16.93■□□□□ 0.3
GCN1-204ENST00000548132 MSH5O43196 834 aa16.93■□□□□ 0.3
GCN1-204ENST00000548132 KLHL34Q8N239 644 aa16.93■□□□□ 0.3
GCN1-204ENST00000548132 FLAD1Q8NFF5 587 aa16.93■□□□□ 0.3
GCN1-204ENST00000548132 YBX3P16989 372 aaKnown RBP eCLIP16.92■□□□□ 0.3
GCN1-204ENST00000548132 ARFGEF1Q9Y6D6 1849 aa16.91■□□□□ 0.3
GCN1-204ENST00000548132 LAMB4A4D0S4 1761 aa16.9■□□□□ 0.3
GCN1-204ENST00000548132 DIAPH1O60610 1272 aaKnown RBP16.9■□□□□ 0.3
GCN1-204ENST00000548132 AKAP4Q5JQC9 854 aa16.9■□□□□ 0.3
GCN1-204ENST00000548132 C1orf141Q5JVX7 400 aa16.9■□□□□ 0.3
GCN1-204ENST00000548132 CABP4P57796 275 aa16.89■□□□□ 0.29
GCN1-204ENST00000548132 MTHFSDQ2M296 383 aaKnown RBP16.89■□□□□ 0.29
GCN1-204ENST00000548132 NFATC2IPQ8NCF5 419 aa16.89■□□□□ 0.29
GCN1-204ENST00000548132 LGR6Q9HBX8 967 aa16.89■□□□□ 0.29
GCN1-204ENST00000548132 KDM3BQ7LBC6 1761 aa16.89■□□□□ 0.29
GCN1-204ENST00000548132 RBM42Q9BTD8 480 aaKnown RBP16.88■□□□□ 0.29
GCN1-204ENST00000548132 SLC52A2Q9HAB3 445 aa16.88■□□□□ 0.29
GCN1-204ENST00000548132 RNMTO43148 476 aaKnown RBP16.87■□□□□ 0.29
GCN1-204ENST00000548132 RC3H1Q5TC82 1133 aaKnown RBP16.87■□□□□ 0.29
GCN1-204ENST00000548132 ZNF784Q8NCA9 323 aaPredicted RBP16.87■□□□□ 0.29
GCN1-204ENST00000548132 ADCY9O60503 1353 aa16.87■□□□□ 0.29
GCN1-204ENST00000548132 COL11A2P13942 1736 aaPredicted RBP16.87■□□□□ 0.29
GCN1-204ENST00000548132 ANKRD31Q8N7Z5 1873 aa16.86■□□□□ 0.29
GCN1-204ENST00000548132 PTCD1O75127 700 aaKnown RBP16.86■□□□□ 0.29
GCN1-204ENST00000548132 CD2APQ9Y5K6 639 aa16.86■□□□□ 0.29
GCN1-204ENST00000548132 CEMIPQ8WUJ3 1361 aa16.86■□□□□ 0.29
GCN1-204ENST00000548132 DCAF8L1A6NGE4 600 aa16.85■□□□□ 0.29
GCN1-204ENST00000548132 CRKLP46109 303 aaKnown RBP16.85■□□□□ 0.29
GCN1-204ENST00000548132 CNGB1Q14028 1251 aaPredicted RBP16.85■□□□□ 0.29
GCN1-204ENST00000548132 GYS1P13807 737 aa16.84■□□□□ 0.29
GCN1-204ENST00000548132 ADRA2BP18089 450 aa16.84■□□□□ 0.29
GCN1-204ENST00000548132 HMGB2P26583 209 aaKnown RBP16.84■□□□□ 0.29
GCN1-204ENST00000548132 RSPH6AQ9H0K4 717 aa16.84■□□□□ 0.29
GCN1-204ENST00000548132 RPS6KA4O75676 772 aa16.83■□□□□ 0.28
GCN1-204ENST00000548132 MMP10P09238 476 aa16.83■□□□□ 0.28
GCN1-204ENST00000548132 PPP2R1AP30153 589 aa16.83■□□□□ 0.28
GCN1-204ENST00000548132 SLC39A6Q13433 755 aa16.83■□□□□ 0.28
GCN1-204ENST00000548132 GPR162Q16538 588 aa16.83■□□□□ 0.28
GCN1-204ENST00000548132 DNAJC10Q8IXB1 793 aa16.83■□□□□ 0.28
GCN1-204ENST00000548132 ARHGEF1Q92888 912 aaKnown RBP16.83■□□□□ 0.28
GCN1-204ENST00000548132 USP42Q9H9J4 1324 aaKnown RBP16.83■□□□□ 0.28
GCN1-204ENST00000548132 RTCBQ9Y3I0 505 aaKnown RBP16.83■□□□□ 0.28
GCN1-204ENST00000548132 SOS1Q07889 1333 aaPredicted RBP16.82■□□□□ 0.28
GCN1-204ENST00000548132 INTS5Q6P9B9 1019 aaKnown RBP16.82■□□□□ 0.28
GCN1-204ENST00000548132 COL15A1P39059 1388 aa16.81■□□□□ 0.28
GCN1-204ENST00000548132 PELP1Q8IZL8 1130 aaKnown RBP16.81■□□□□ 0.28
GCN1-204ENST00000548132 SRP68Q9UHB9 627 aaKnown RBP16.81■□□□□ 0.28
GCN1-204ENST00000548132 U2SURPO15042 1029 aaKnown RBP16.8■□□□□ 0.28
GCN1-204ENST00000548132 DDR1Q08345 913 aa16.8■□□□□ 0.28
GCN1-204ENST00000548132 PHACTR3Q96KR7 559 aa16.8■□□□□ 0.28
GCN1-204ENST00000548132 CYP19A1P11511 503 aaPredicted RBP16.79■□□□□ 0.28
GCN1-204ENST00000548132 IL17REQ8NFR9 667 aa16.79■□□□□ 0.28
GCN1-204ENST00000548132 ZBTB1Q9Y2K1 713 aa16.79■□□□□ 0.28
GCN1-204ENST00000548132 ATP10DQ9P241 1426 aa16.79■□□□□ 0.28
GCN1-204ENST00000548132 PRKAR2BP31323 418 aa16.78■□□□□ 0.28
GCN1-204ENST00000548132 TRAPPC3LQ5T215 181 aa16.78■□□□□ 0.28
GCN1-204ENST00000548132 CCDC87Q9NVE4 849 aa16.78■□□□□ 0.28
GCN1-204ENST00000548132 WWC3Q9ULE0 1092 aa16.78■□□□□ 0.28
GCN1-204ENST00000548132 ARFGEF2Q9Y6D5 1785 aa16.78■□□□□ 0.28
GCN1-204ENST00000548132 SBF1O95248 1867 aa16.78■□□□□ 0.28
GCN1-204ENST00000548132 FKBP8Q14318 412 aa16.77■□□□□ 0.28
GCN1-204ENST00000548132 CACNA1SQ13698 1873 aa16.77■□□□□ 0.27
GCN1-204ENST00000548132 HEG1Q9ULI3 1381 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms