RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 PEAK1Q9H792 1746 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 PRDM15P57071 1507 aaPredicted RBP0.8□□□□□ -2.28
CEP290-203ENST00000547691 PLCH1Q4KWH8 1693 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 PAPPAQ13219 1627 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 THSD7BQ9C0I4 1608 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 NRXN3Q9Y4C0 1643 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 MAN1A2O60476 641 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 OSBPP22059 807 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 FOSBP53539 338 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 ZDHHC13Q8IUH4 622 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 RGS12O14924 1447 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 CEP152O94986 1710 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 SYCP2Q9BX26 1530 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 KRTAP10-2P60368 255 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.8□□□□□ -2.28
CEP290-203ENST00000547691 CIZ1Q9ULV3 898 aaPredicted RBP0.8□□□□□ -2.28
CEP290-203ENST00000547691 KNDC1Q76NI1 1749 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 RTEL1-TNFRSF6BF6WH68 1400 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 APBA3O96018 575 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 ERFEQ4G0M1 354 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 MCTP1Q6DN14 999 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 SLC38A3Q99624 504 aa0.8□□□□□ -2.28
CEP290-203ENST00000547691 DCCP43146 1447 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 ANKRD33BA6NCL7 494 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 NLRP6P59044 892 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 COPS2P61201 443 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 PLA2G4EQ3MJ16 856 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 ZFRQ96KR1 1074 aaKnown RBP0.79□□□□□ -2.28
CEP290-203ENST00000547691 MTRQ99707 1265 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 ADGRB2O60241 1585 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 GLI3P10071 1580 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 ATRNO75882 1429 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 KIF27Q86VH2 1401 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 AMPD1P23109 780 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 UPF1Q92900 1129 aaKnown RBP eCLIP0.79□□□□□ -2.28
CEP290-203ENST00000547691 PCMTD2Q9NV79 361 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 CHD4Q14839 1912 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 EPPK1P58107 5090 aaKnown RBP0.79□□□□□ -2.28
CEP290-203ENST00000547691 SETD5Q9C0A6 1442 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 B8ZZF3 427 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 SOX12O15370 315 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 MPNDQ8N594 471 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 LRRC4BQ9NT99 713 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 RABGEF1Q9UJ41 708 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 KIF1AQ12756 1690 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 CELSR1Q9NYQ6 3014 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 ARHGAP31Q2M1Z3 1444 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 KIAA1107Q9UPP5 1409 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 ERBB4Q15303 1308 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 GCC2Q8IWJ2 1684 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 ADAMTS7Q9UKP4 1686 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 ARTNQ5T4W7 220 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 DBX2Q6ZNG2 339 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 NANOS1Q8WY41 292 aaKnown RBP0.79□□□□□ -2.28
CEP290-203ENST00000547691 NPHP4O75161 1426 aaPredicted RBP0.79□□□□□ -2.28
CEP290-203ENST00000547691 WDR90Q96KV7 1748 aa0.79□□□□□ -2.28
CEP290-203ENST00000547691 PARP4Q9UKK3 1724 aaKnown RBP0.79□□□□□ -2.28
CEP290-203ENST00000547691 RBM10P98175 930 aaKnown RBP0.79□□□□□ -2.28
CEP290-203ENST00000547691 MYOM1P52179 1685 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 ARHGEF28Q8N1W1 1705 aaKnown RBP0.78□□□□□ -2.28
CEP290-203ENST00000547691 KIAA1551Q9HCM1 1747 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 KMT5BQ4FZB7 885 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 RSPH4AQ5TD94 716 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 CAMTA1Q9Y6Y1 1673 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 ARHGAP35Q9NRY4 1499 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 ASXL1Q8IXJ9 1541 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 USP54Q70EL1 1684 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 CDC14CA4D256 554 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 HSPA1LP34931 641 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 SNIP1Q8TAD8 396 aaKnown RBP0.78□□□□□ -2.28
CEP290-203ENST00000547691 PTCH1Q13635 1447 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 TRPM3Q9HCF6 1732 aaPredicted RBP0.78□□□□□ -2.28
CEP290-203ENST00000547691 SPATA31A6Q5VVP1 1343 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 ERVK-7P63135 1459 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 MBD5Q9P267 1494 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 SBF2Q86WG5 1849 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 EHBP1L1Q8N3D4 1523 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 DUOX2Q9NRD8 1548 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 GATA4P43694 442 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 FAM98CQ17RN3 349 aaKnown RBP0.78□□□□□ -2.28
CEP290-203ENST00000547691 ANKLE1Q8NAG6 615 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 ZDHHC16Q969W1 377 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 RYDENQ9NUL5 291 aaKnown RBP0.78□□□□□ -2.28
CEP290-203ENST00000547691 PCDHB3Q9Y5E6 796 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 KIF13BQ9NQT8 1826 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 ALS2Q96Q42 1657 aa0.78□□□□□ -2.28
CEP290-203ENST00000547691 FMN1Q68DA7 1419 aa0.78□□□□□ -2.29
CEP290-203ENST00000547691 AHNAK2Q8IVF2 5795 aa0.78□□□□□ -2.29
CEP290-203ENST00000547691 GRIN2CQ14957 1233 aa0.78□□□□□ -2.29
CEP290-203ENST00000547691 SLC4A9Q96Q91 983 aa0.78□□□□□ -2.29
CEP290-203ENST00000547691 REPIN1Q9BWE0 567 aaKnown RBP0.78□□□□□ -2.29
CEP290-203ENST00000547691 KIAA1468Q9P260 1216 aa0.78□□□□□ -2.29
CEP290-203ENST00000547691 FAT4Q6V0I7 4981 aa0.78□□□□□ -2.29
CEP290-203ENST00000547691 CARMIL1Q5VZK9 1371 aa0.78□□□□□ -2.29
CEP290-203ENST00000547691 MAP3K5Q99683 1374 aa0.78□□□□□ -2.29
CEP290-203ENST00000547691 LAMB1P07942 1786 aa0.78□□□□□ -2.29
CEP290-203ENST00000547691 MST1RQ04912 1400 aa0.78□□□□□ -2.29
CEP290-203ENST00000547691 RYR2Q92736 4967 aa0.77□□□□□ -2.29
CEP290-203ENST00000547691 SPDYE3A6NKU9 549 aa0.77□□□□□ -2.29
CEP290-203ENST00000547691 HRCP23327 699 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms