RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 CCT4P50991 539 aaKnown RBP28.8■■■□□ 2.2
FOXA1-202ENST00000545425 IGSF1Q8N6C5 1336 aa28.79■■■□□ 2.2
FOXA1-202ENST00000545425 TTC22Q5TAA0 569 aa28.79■■■□□ 2.2
FOXA1-202ENST00000545425 GBP4Q96PP9 640 aa28.79■■■□□ 2.2
FOXA1-202ENST00000545425 LRRC37A3O60309 1634 aa28.78■■■□□ 2.2
FOXA1-202ENST00000545425 HSP90AB2PQ58FF8 381 aa28.78■■■□□ 2.2
FOXA1-202ENST00000545425 CASC1Q6TDU7 716 aa28.78■■■□□ 2.2
FOXA1-202ENST00000545425 BRPF3Q9ULD4 1205 aa28.78■■■□□ 2.2
FOXA1-202ENST00000545425 CEP85Q6P2H3 762 aa28.78■■■□□ 2.2
FOXA1-202ENST00000545425 KIF2CQ99661 725 aa28.78■■■□□ 2.2
FOXA1-202ENST00000545425 MAP3K19Q56UN5 1328 aa28.77■■■□□ 2.2
FOXA1-202ENST00000545425 ADAMTS2O95450 1211 aa28.77■■■□□ 2.2
FOXA1-202ENST00000545425 K7ELQ4 463 aaPredicted RBP28.76■■■□□ 2.19
FOXA1-202ENST00000545425 RABEP1Q15276 862 aa28.76■■■□□ 2.19
FOXA1-202ENST00000545425 C8orf37Q96NL8 207 aa28.76■■■□□ 2.19
FOXA1-202ENST00000545425 SKOR2Q2VWA4 1001 aaPredicted RBP28.76■■■□□ 2.19
FOXA1-202ENST00000545425 RGPD8O14715 1765 aaPredicted RBP28.76■■■□□ 2.19
FOXA1-202ENST00000545425 COL22A1Q8NFW1 1626 aaPredicted RBP28.75■■■□□ 2.19
FOXA1-202ENST00000545425 AFF2P51816 1311 aa28.75■■■□□ 2.19
FOXA1-202ENST00000545425 MCM10Q7L590 875 aa28.74■■■□□ 2.19
FOXA1-202ENST00000545425 NGDNQ8NEJ9 315 aaKnown RBP28.74■■■□□ 2.19
FOXA1-202ENST00000545425 CACNA1FO60840 1977 aa28.74■■■□□ 2.19
FOXA1-202ENST00000545425 FSD2A1L4K1 749 aa28.73■■■□□ 2.19
FOXA1-202ENST00000545425 FAM43AQ8N2R8 423 aa28.73■■■□□ 2.19
FOXA1-202ENST00000545425 NGLY1Q96IV0 654 aa28.73■■■□□ 2.19
FOXA1-202ENST00000545425 TNS3Q68CZ2 1445 aa28.73■■■□□ 2.19
FOXA1-202ENST00000545425 TRAK2O60296 914 aa28.73■■■□□ 2.19
FOXA1-202ENST00000545425 RAB3GAP1Q15042 981 aa28.73■■■□□ 2.19
FOXA1-202ENST00000545425 PIK3C2AO00443 1686 aa28.73■■■□□ 2.19
FOXA1-202ENST00000545425 GOLGA6L3A6NEY3 463 aa28.72■■■□□ 2.19
FOXA1-202ENST00000545425 GSPT1P15170 499 aaKnown RBP28.71■■■□□ 2.19
FOXA1-202ENST00000545425 TSPYL4Q9UJ04 414 aa28.71■■■□□ 2.19
FOXA1-202ENST00000545425 OSBPL3Q9H4L5 887 aa28.71■■■□□ 2.19
FOXA1-202ENST00000545425 N4BP2Q86UW6 1770 aaPredicted RBP28.7■■■□□ 2.18
FOXA1-202ENST00000545425 SLC4A2P04920 1241 aa28.69■■■□□ 2.18
FOXA1-202ENST00000545425 MTHFSDQ2M296 383 aaKnown RBP28.69■■■□□ 2.18
FOXA1-202ENST00000545425 CLEC17AQ6ZS10 378 aa28.69■■■□□ 2.18
FOXA1-202ENST00000545425 AMPHP49418 695 aa28.69■■■□□ 2.18
FOXA1-202ENST00000545425 LMOD2Q6P5Q4 547 aa28.69■■■□□ 2.18
FOXA1-202ENST00000545425 SPRYD3Q8NCJ5 442 aa28.69■■■□□ 2.18
FOXA1-202ENST00000545425 STK31Q9BXU1 1019 aa28.69■■■□□ 2.18
FOXA1-202ENST00000545425 CHMP4AQ9BY43 222 aa28.69■■■□□ 2.18
FOXA1-202ENST00000545425 PXDNLA1KZ92 1463 aa28.69■■■□□ 2.18
FOXA1-202ENST00000545425 HSP90AA1P07900 732 aaKnown RBP28.67■■■□□ 2.18
FOXA1-202ENST00000545425 REC8O95072 547 aa28.66■■■□□ 2.18
FOXA1-202ENST00000545425 GNAI3P08754 354 aa28.65■■■□□ 2.18
FOXA1-202ENST00000545425 RXRBP28702 533 aa28.65■■■□□ 2.18
FOXA1-202ENST00000545425 CCDC30Q5VVM6 783 aa28.65■■■□□ 2.18
FOXA1-202ENST00000545425 FNBP4Q8N3X1 1017 aaPredicted RBP28.65■■■□□ 2.18
FOXA1-202ENST00000545425 EYA1Q99502 592 aa28.64■■■□□ 2.18
FOXA1-202ENST00000545425 FAM208AQ9UK61 1670 aaKnown RBP28.64■■■□□ 2.18
FOXA1-202ENST00000545425 MRE11P49959 708 aa28.64■■■□□ 2.17
FOXA1-202ENST00000545425 TNPO1Q92973 898 aaKnown RBP28.64■■■□□ 2.17
FOXA1-202ENST00000545425 MEIS3Q99687 375 aa28.63■■■□□ 2.17
FOXA1-202ENST00000545425 USP26Q9BXU7 913 aa28.63■■■□□ 2.17
FOXA1-202ENST00000545425 GOLGA6L22H0YM25 854 aa28.62■■■□□ 2.17
FOXA1-202ENST00000545425 GNAI2P04899 355 aa28.62■■■□□ 2.17
FOXA1-202ENST00000545425 KRT24Q2M2I5 525 aa28.62■■■□□ 2.17
FOXA1-202ENST00000545425 QTRT2Q9H974 415 aaKnown RBP28.62■■■□□ 2.17
FOXA1-202ENST00000545425 GNAT3A8MTJ3 354 aa28.62■■■□□ 2.17
FOXA1-202ENST00000545425 USP21Q9UK80 565 aa28.62■■■□□ 2.17
FOXA1-202ENST00000545425 MARF1Q9Y4F3 1742 aaKnown RBP28.6■■■□□ 2.17
FOXA1-202ENST00000545425 CWC22Q9HCG8 908 aaKnown RBP28.6■■■□□ 2.17
FOXA1-202ENST00000545425 MAP3K5Q99683 1374 aa28.6■■■□□ 2.17
FOXA1-202ENST00000545425 NUCB2P80303 420 aa28.59■■■□□ 2.17
FOXA1-202ENST00000545425 CABLES1Q8TDN4 633 aa28.59■■■□□ 2.17
FOXA1-202ENST00000545425 SDSP20132 328 aa28.58■■■□□ 2.17
FOXA1-202ENST00000545425 HOXC9P31274 260 aa28.57■■■□□ 2.16
FOXA1-202ENST00000545425 RBM6P78332 1123 aaKnown RBP28.57■■■□□ 2.16
FOXA1-202ENST00000545425 ST18O60284 1047 aa28.57■■■□□ 2.16
FOXA1-202ENST00000545425 NLRP6P59044 892 aa28.57■■■□□ 2.16
FOXA1-202ENST00000545425 TRPC5Q9UL62 973 aaPredicted RBP28.57■■■□□ 2.16
FOXA1-202ENST00000545425 EPB41L2O43491 1005 aaKnown RBP28.56■■■□□ 2.16
FOXA1-202ENST00000545425 SRCIN1Q9C0H9 1055 aa28.56■■■□□ 2.16
FOXA1-202ENST00000545425 ERC2O15083 957 aa28.55■■■□□ 2.16
FOXA1-202ENST00000545425 AOX1Q06278 1338 aa28.55■■■□□ 2.16
FOXA1-202ENST00000545425 TRPM3Q9HCF6 1732 aaPredicted RBP28.55■■■□□ 2.16
FOXA1-202ENST00000545425 PLEKHG5O94827 1062 aa28.54■■■□□ 2.16
FOXA1-202ENST00000545425 IBTKQ9P2D0 1353 aaPredicted RBP28.54■■■□□ 2.16
FOXA1-202ENST00000545425 FLIIQ13045 1269 aa28.53■■■□□ 2.16
FOXA1-202ENST00000545425 TAF7Q15545 349 aaPredicted RBP28.53■■■□□ 2.16
FOXA1-202ENST00000545425 HOXB7P09629 217 aa28.53■■■□□ 2.16
FOXA1-202ENST00000545425 XRCC6P12956 609 aaKnown RBP eCLIP28.53■■■□□ 2.16
FOXA1-202ENST00000545425 MCM2P49736 904 aa28.52■■■□□ 2.16
FOXA1-202ENST00000545425 PDE1AP54750 535 aa28.52■■■□□ 2.16
FOXA1-202ENST00000545425 ATP8B2P98198 1209 aa28.52■■■□□ 2.16
FOXA1-202ENST00000545425 C16orf71Q8IYS4 520 aaPredicted RBP28.52■■■□□ 2.16
FOXA1-202ENST00000545425 CD2BP2O95400 341 aaKnown RBP28.51■■■□□ 2.15
FOXA1-202ENST00000545425 PHRF1Q9P1Y6 1649 aaKnown RBP28.51■■■□□ 2.15
FOXA1-202ENST00000545425 G2E3Q7L622 706 aa28.5■■■□□ 2.15
FOXA1-202ENST00000545425 BCL9LQ86UU0 1499 aa28.5■■■□□ 2.15
FOXA1-202ENST00000545425 SLC4A10Q6U841 1118 aa28.5■■■□□ 2.15
FOXA1-202ENST00000545425 LRRCC1Q9C099 1032 aa28.5■■■□□ 2.15
FOXA1-202ENST00000545425 ALS2Q96Q42 1657 aa28.49■■■□□ 2.15
FOXA1-202ENST00000545425 SALL3Q9BXA9 1300 aa28.49■■■□□ 2.15
FOXA1-202ENST00000545425 SOX12O15370 315 aa28.49■■■□□ 2.15
FOXA1-202ENST00000545425 UNC5CLQ8IV45 518 aa28.49■■■□□ 2.15
FOXA1-202ENST00000545425 RTN4Q9NQC3 1192 aaKnown RBP28.49■■■□□ 2.15
FOXA1-202ENST00000545425 STAP2Q9UGK3 403 aa28.48■■■□□ 2.15
FOXA1-202ENST00000545425 TUBGCP6Q96RT7 1819 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms