RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 AIDAQ96BJ3 306 aa17.99■□□□□ 0.47
CHD4-210ENST00000544040 POTEJP0CG39 1038 aa17.99■□□□□ 0.47
CHD4-210ENST00000544040 NBPF1Q3BBV0 1214 aa17.99■□□□□ 0.47
CHD4-210ENST00000544040 ANO10Q9NW15 660 aa17.99■□□□□ 0.47
CHD4-210ENST00000544040 CCDC82Q8N4S0 544 aa17.98■□□□□ 0.47
CHD4-210ENST00000544040 TMEM57Q8N5G2 664 aa17.98■□□□□ 0.47
CHD4-210ENST00000544040 MYOM3Q5VTT5 1437 aa17.98■□□□□ 0.47
CHD4-210ENST00000544040 TXNDC2Q86VQ3 553 aa17.98■□□□□ 0.47
CHD4-210ENST00000544040 MIS18AQ9NYP9 233 aa17.98■□□□□ 0.47
CHD4-210ENST00000544040 SERPINA10Q9UK55 444 aa17.98■□□□□ 0.47
CHD4-210ENST00000544040 SSFA2P28290 1259 aa17.98■□□□□ 0.47
CHD4-210ENST00000544040 BTBD11A6QL63 1104 aa17.97■□□□□ 0.47
CHD4-210ENST00000544040 KIF2AO00139 706 aaPredicted RBP17.97■□□□□ 0.47
CHD4-210ENST00000544040 PPP1R12BO60237 982 aaPredicted RBP17.97■□□□□ 0.47
CHD4-210ENST00000544040 CETN2P41208 172 aa17.97■□□□□ 0.47
CHD4-210ENST00000544040 CEP126Q9P2H0 1117 aa17.97■□□□□ 0.47
CHD4-210ENST00000544040 ABCF2Q9UG63 623 aa17.97■□□□□ 0.47
CHD4-210ENST00000544040 TSG101Q99816 390 aa17.96■□□□□ 0.47
CHD4-210ENST00000544040 STAMBPO95630 424 aa17.96■□□□□ 0.47
CHD4-210ENST00000544040 TDRD12Q587J7 1177 aaKnown RBP17.96■□□□□ 0.47
CHD4-210ENST00000544040 SRRTQ9BXP5 876 aaKnown RBP17.96■□□□□ 0.47
CHD4-210ENST00000544040 MINDY4BA8MYZ0 360 aa17.96■□□□□ 0.47
CHD4-210ENST00000544040 RRS1Q15050 365 aaKnown RBP17.96■□□□□ 0.47
CHD4-210ENST00000544040 WDR63Q8IWG1 891 aa17.96■□□□□ 0.47
CHD4-210ENST00000544040 SMC1AQ14683 1233 aaKnown RBP17.96■□□□□ 0.46
CHD4-210ENST00000544040 TOM1L2Q6ZVM7 507 aa17.96■□□□□ 0.46
CHD4-210ENST00000544040 CDK19Q9BWU1 502 aa17.96■□□□□ 0.46
CHD4-210ENST00000544040 CABP1Q9NZU7 370 aa17.96■□□□□ 0.46
CHD4-210ENST00000544040 GCOM1H8Y6P7 765 aaPredicted RBP17.95■□□□□ 0.46
CHD4-210ENST00000544040 MYZAPP0CAP1 466 aa17.95■□□□□ 0.46
CHD4-210ENST00000544040 HLTFQ14527 1009 aaKnown RBP eCLIP17.95■□□□□ 0.463e-7■□□□□ 10.3
CHD4-210ENST00000544040 SPECC1Q5M775 1068 aa17.95■□□□□ 0.46
CHD4-210ENST00000544040 LARP1Q6PKG0 1096 aaKnown RBP17.95■□□□□ 0.46
CHD4-210ENST00000544040 CALCOCO1Q9P1Z2 691 aa17.95■□□□□ 0.46
CHD4-210ENST00000544040 WIZO95785 1651 aa17.95■□□□□ 0.46
CHD4-210ENST00000544040 CTR9Q6PD62 1173 aa17.95■□□□□ 0.46
CHD4-210ENST00000544040 BIN1O00499 593 aa17.95■□□□□ 0.46
CHD4-210ENST00000544040 GDPD2Q9HCC8 539 aa17.95■□□□□ 0.46
CHD4-210ENST00000544040 TMC6Q7Z403 805 aa17.95■□□□□ 0.46
CHD4-210ENST00000544040 FAM107BQ9H098 131 aa17.94■□□□□ 0.46
CHD4-210ENST00000544040 ATP2C2O75185 946 aa17.94■□□□□ 0.46
CHD4-210ENST00000544040 LMAN1P49257 510 aa17.94■□□□□ 0.46
CHD4-210ENST00000544040 MICALCLQ6ZW33 695 aa17.94■□□□□ 0.46
CHD4-210ENST00000544040 CCDC184Q52MB2 194 aa17.94■□□□□ 0.46
CHD4-210ENST00000544040 ISM2Q6H9L7 571 aa17.94■□□□□ 0.46
CHD4-210ENST00000544040 SMARCC1Q92922 1105 aaPredicted RBP17.94■□□□□ 0.46
CHD4-210ENST00000544040 SEC63Q9UGP8 760 aaKnown RBP17.94■□□□□ 0.46
CHD4-210ENST00000544040 LIG1P18858 919 aa17.94■□□□□ 0.46
CHD4-210ENST00000544040 MCM3P25205 808 aa17.94■□□□□ 0.46
CHD4-210ENST00000544040 RRBP1Q9P2E9 1410 aaKnown RBP17.94■□□□□ 0.46
CHD4-210ENST00000544040 ZSWIM4Q9H7M6 989 aa17.94■□□□□ 0.46
CHD4-210ENST00000544040 BOLA2Q9H3K6 86 aa17.93■□□□□ 0.46
CHD4-210ENST00000544040 FGD6Q6ZV73 1430 aa17.93■□□□□ 0.46
CHD4-210ENST00000544040 PSMD1Q99460 953 aa17.93■□□□□ 0.46
CHD4-210ENST00000544040 CCDC175P0C221 793 aa17.93■□□□□ 0.46
CHD4-210ENST00000544040 PAFAH1B1P43034 410 aa17.93■□□□□ 0.46
CHD4-210ENST00000544040 MAATS1Q7Z4T9 603 aa17.93■□□□□ 0.46
CHD4-210ENST00000544040 PNISRQ8TF01 805 aaKnown RBP17.93■□□□□ 0.46
CHD4-210ENST00000544040 PUS7Q96PZ0 661 aaKnown RBP17.93■□□□□ 0.46
CHD4-210ENST00000544040 SCLT1Q96NL6 688 aa17.92■□□□□ 0.46
CHD4-210ENST00000544040 PRDM2Q13029 1718 aa17.92■□□□□ 0.46
CHD4-210ENST00000544040 SMARCA2P51531 1590 aa17.92■□□□□ 0.46
CHD4-210ENST00000544040 TMCO5BA8MYB1 307 aa17.92■□□□□ 0.46
CHD4-210ENST00000544040 PPM1FP49593 454 aaPredicted RBP17.92■□□□□ 0.46
CHD4-210ENST00000544040 PRPF4BQ13523 1007 aaKnown RBP17.92■□□□□ 0.46
CHD4-210ENST00000544040 C8orf76Q96K31 380 aa17.92■□□□□ 0.46
CHD4-210ENST00000544040 MX1P20591 662 aa17.92■□□□□ 0.46
CHD4-210ENST00000544040 NUTM2BA6NNL0 878 aaPredicted RBP17.91■□□□□ 0.46
CHD4-210ENST00000544040 NUTM2EB1AL46 878 aaPredicted RBP17.91■□□□□ 0.46
CHD4-210ENST00000544040 NUTM2AQ8IVF1 878 aaPredicted RBP17.91■□□□□ 0.46
CHD4-210ENST00000544040 RBM27Q9P2N5 1060 aaKnown RBP17.91■□□□□ 0.46
CHD4-210ENST00000544040 USO1O60763 962 aaKnown RBP17.91■□□□□ 0.46
CHD4-210ENST00000544040 CNNM3Q8NE01 707 aa17.91■□□□□ 0.46
CHD4-210ENST00000544040 SPTY2D1Q68D10 685 aaPredicted RBP17.91■□□□□ 0.46
CHD4-210ENST00000544040 SPG7Q9UQ90 795 aa17.91■□□□□ 0.46
CHD4-210ENST00000544040 YEATS4O95619 227 aa17.91■□□□□ 0.46
CHD4-210ENST00000544040 HOOK3Q86VS8 718 aa17.91■□□□□ 0.46
CHD4-210ENST00000544040 TNPO1Q92973 898 aaKnown RBP17.91■□□□□ 0.46
CHD4-210ENST00000544040 ANKRD50Q9ULJ7 1429 aa17.91■□□□□ 0.46
CHD4-210ENST00000544040 CCT2P78371 535 aaKnown RBP17.91■□□□□ 0.46
CHD4-210ENST00000544040 METTL24Q5JXM2 366 aa17.91■□□□□ 0.46
CHD4-210ENST00000544040 VPS36Q86VN1 386 aa17.91■□□□□ 0.46
CHD4-210ENST00000544040 ADCY5O95622 1261 aa17.9■□□□□ 0.46
CHD4-210ENST00000544040 PPFIA3O75145 1194 aa17.9■□□□□ 0.46
CHD4-210ENST00000544040 CTNNA2P26232 953 aa17.9■□□□□ 0.46
CHD4-210ENST00000544040 TRMT1LQ7Z2T5 733 aaKnown RBP17.9■□□□□ 0.46
CHD4-210ENST00000544040 U3KPZ7 1027 aaPredicted RBP17.9■□□□□ 0.46
CHD4-210ENST00000544040 POLR3DP05423 398 aaPredicted RBP17.89■□□□□ 0.46
CHD4-210ENST00000544040 IGHMBP2P38935 993 aaKnown RBP17.89■□□□□ 0.45
CHD4-210ENST00000544040 FSIP1Q8NA03 581 aa17.89■□□□□ 0.45
CHD4-210ENST00000544040 THUMPD2Q9BTF0 503 aaKnown RBP17.89■□□□□ 0.45
CHD4-210ENST00000544040 TTC16Q8NEE8 873 aa17.89■□□□□ 0.45
CHD4-210ENST00000544040 SCAND2PQ9GZW5 306 aaPredicted RBP17.89■□□□□ 0.45
CHD4-210ENST00000544040 ZBTB9Q96C00 473 aa17.89■□□□□ 0.45
CHD4-210ENST00000544040 PANK2Q9BZ23 570 aa17.89■□□□□ 0.45
CHD4-210ENST00000544040 RPAP2Q8IXW5 612 aaPredicted RBP17.89■□□□□ 0.45
CHD4-210ENST00000544040 TFIP11Q9UBB9 837 aaKnown RBP17.89■□□□□ 0.45
CHD4-210ENST00000544040 FYCO1Q9BQS8 1478 aa17.88■□□□□ 0.45
CHD4-210ENST00000544040 MKNK2Q9HBH9 465 aa17.88■□□□□ 0.45
CHD4-210ENST00000544040 CCDC96Q2M329 555 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms