RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 LUZP1Q86V48 1076 aa15.16■□□□□ 0.02
SMG8-202ENST00000543872 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.16■□□□□ 0.02
SMG8-202ENST00000543872 PREX2Q70Z35 1606 aa15.16■□□□□ 0.02
SMG8-202ENST00000543872 SMTNL1A8MU46 457 aa15.16■□□□□ 0.02
SMG8-202ENST00000543872 NFE2L2Q16236 605 aa15.16■□□□□ 0.02
SMG8-202ENST00000543872 RTF1Q92541 710 aaKnown RBP15.16■□□□□ 0.02
SMG8-202ENST00000543872 ST7Q9NRC1 585 aa15.16■□□□□ 0.02
SMG8-202ENST00000543872 ZSCAN22P10073 491 aaPredicted RBP15.15■□□□□ 0.02
SMG8-202ENST00000543872 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.15■□□□□ 0.02
SMG8-202ENST00000543872 KRT222Q8N1A0 295 aa15.15■□□□□ 0.02
SMG8-202ENST00000543872 KIF18AQ8NI77 898 aa15.15■□□□□ 0.02
SMG8-202ENST00000543872 CHMP4CQ96CF2 233 aa15.15■□□□□ 0.02
SMG8-202ENST00000543872 TRIM5Q9C035 493 aa15.15■□□□□ 0.02
SMG8-202ENST00000543872 PTCH1Q13635 1447 aa15.15■□□□□ 0.02
SMG8-202ENST00000543872 CCDC192P0DO97 292 aa15.15■□□□□ 0.02
SMG8-202ENST00000543872 DNM1Q05193 864 aaKnown RBP15.15■□□□□ 0.02
SMG8-202ENST00000543872 TRIM34Q9BYJ4 488 aa15.15■□□□□ 0.02
SMG8-202ENST00000543872 PIK3R4Q99570 1358 aa15.14■□□□□ 0.01
SMG8-202ENST00000543872 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.14■□□□□ 0.01
SMG8-202ENST00000543872 BRD2P25440 801 aaKnown RBP15.14■□□□□ 0.01
SMG8-202ENST00000543872 CKAP2LQ8IYA6 745 aa15.14■□□□□ 0.01
SMG8-202ENST00000543872 C14orf93Q9H972 538 aaKnown RBP15.14■□□□□ 0.01
SMG8-202ENST00000543872 ABCA6Q8N139 1617 aa15.14■□□□□ 0.01
SMG8-202ENST00000543872 STX6O43752 255 aa15.13■□□□□ 0.01
SMG8-202ENST00000543872 SYT1P21579 422 aa15.13■□□□□ 0.01
SMG8-202ENST00000543872 SMC3Q9UQE7 1217 aa15.13■□□□□ 0.01
SMG8-202ENST00000543872 MORC2Q9Y6X9 1032 aaPredicted RBP15.13■□□□□ 0.01
SMG8-202ENST00000543872 NSD2O96028 1365 aa15.13■□□□□ 0.01
SMG8-202ENST00000543872 VPS37CA5D8V6 355 aaPredicted RBP15.12■□□□□ 0.01
SMG8-202ENST00000543872 FUCA2Q9BTY2 467 aa15.12■□□□□ 0.01
SMG8-202ENST00000543872 A0A1W2PP64 1363 aa15.12■□□□□ 0.01
SMG8-202ENST00000543872 CAPN2P17655 700 aa15.12■□□□□ 0.01
SMG8-202ENST00000543872 MINK1Q8N4C8 1332 aaPredicted RBP15.11■□□□□ 0.01
SMG8-202ENST00000543872 MAP4K4O95819 1239 aaPredicted RBP15.11■□□□□ 0.01
SMG8-202ENST00000543872 HMMRO75330 724 aa15.11■□□□□ 0.01
SMG8-202ENST00000543872 F13A1P00488 732 aa15.11■□□□□ 0.01
SMG8-202ENST00000543872 CHMLP26374 656 aa15.11■□□□□ 0.01
SMG8-202ENST00000543872 KMT5BQ4FZB7 885 aa15.11■□□□□ 0.01
SMG8-202ENST00000543872 ZNF215Q9UL58 517 aaPredicted RBP15.11■□□□□ 0.01
SMG8-202ENST00000543872 CPA1P15085 419 aa15.11■□□□□ 0.01
SMG8-202ENST00000543872 CEP135Q66GS9 1140 aa15.11■□□□□ 0.01
SMG8-202ENST00000543872 TERF2IPQ9NYB0 399 aa15.1■□□□□ 0.01
SMG8-202ENST00000543872 MAP3K4Q9Y6R4 1608 aa15.1■□□□□ 0.01
SMG8-202ENST00000543872 VGFO15240 615 aaPredicted RBP15.1■□□□□ 0.01
SMG8-202ENST00000543872 SLC20A2Q08357 652 aa15.1■□□□□ 0.01
SMG8-202ENST00000543872 TMEM87AQ8NBN3 555 aa15.1■□□□□ 0.01
SMG8-202ENST00000543872 FAM200AQ8TCP9 573 aa15.1■□□□□ 0.01
SMG8-202ENST00000543872 ZSCAN25Q6NSZ9 544 aa15.09■□□□□ 0.01
SMG8-202ENST00000543872 FERMT3Q86UX7 667 aa15.09■□□□□ 0.01
SMG8-202ENST00000543872 TRMT1Q9NXH9 659 aaKnown RBP15.09■□□□□ 0.01
SMG8-202ENST00000543872 PAXBP1Q9Y5B6 917 aa15.09■□□□□ 0.01
SMG8-202ENST00000543872 ATP6V1DQ9Y5K8 247 aa15.09■□□□□ 0.01
SMG8-202ENST00000543872 UNC5CLQ8IV45 518 aa15.09■□□□□ 0.01
SMG8-202ENST00000543872 ZNF397Q8NF99 534 aaPredicted RBP15.09■□□□□ 0.01
SMG8-202ENST00000543872 CALCOCO1Q9P1Z2 691 aa15.09■□□□□ 0.01
SMG8-202ENST00000543872 F6X3S4 739 aa15.09■□□□□ 0.01
SMG8-202ENST00000543872 ELF2Q15723 593 aa15.09■□□□□ 0.01
SMG8-202ENST00000543872 FAM173BQ6P4H8 233 aa15.09■□□□□ 0.01
SMG8-202ENST00000543872 RPAP1Q9BWH6 1393 aaPredicted RBP15.09■□□□□ 0.01
SMG8-202ENST00000543872 ANAPC15P60006 121 aa15.08■□□□□ 0.01
SMG8-202ENST00000543872 TYRO3Q06418 890 aa15.08■□□□□ 0.01
SMG8-202ENST00000543872 ANO6Q4KMQ2 910 aa15.08■□□□□ 0.01
SMG8-202ENST00000543872 CCDC83Q8IWF9 413 aa15.08■□□□□ 0.01
SMG8-202ENST00000543872 DDX54Q8TDD1 881 aaKnown RBP15.08■□□□□ 0.01
SMG8-202ENST00000543872 CACTINQ8WUQ7 758 aaKnown RBP15.08■□□□□ 0.01
SMG8-202ENST00000543872 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.08■□□□□ 0.01
SMG8-202ENST00000543872 MSH6P52701 1360 aa15.08■□□□□ 0
SMG8-202ENST00000543872 MAP3K11Q16584 847 aa15.08■□□□□ 0
SMG8-202ENST00000543872 NUP62CLQ9H1M0 184 aa15.08■□□□□ 0
SMG8-202ENST00000543872 IL25Q9H293 177 aa15.08■□□□□ 0
SMG8-202ENST00000543872 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.08■□□□□ 0
SMG8-202ENST00000543872 RTL1A6NKG5 1358 aa15.08■□□□□ 0
SMG8-202ENST00000543872 AK2P54819 239 aa15.07■□□□□ 0
SMG8-202ENST00000543872 SYCP1Q15431 976 aa15.07■□□□□ 0
SMG8-202ENST00000543872 FBXO38Q6PIJ6 1188 aa15.07■□□□□ 0
SMG8-202ENST00000543872 GTF3C6Q969F1 213 aa15.07■□□□□ 0
SMG8-202ENST00000543872 GOLGA6L4A6NEF3 574 aa15.07■□□□□ 0
SMG8-202ENST00000543872 CBX8Q9HC52 389 aa15.07■□□□□ 0
SMG8-202ENST00000543872 CLIP2Q9UDT6 1046 aa15.07■□□□□ 0
SMG8-202ENST00000543872 LIG1P18858 919 aa15.07■□□□□ 0
SMG8-202ENST00000543872 ARID5BQ14865 1188 aa15.07■□□□□ 0
SMG8-202ENST00000543872 RGS12O14924 1447 aa15.07■□□□□ 0
SMG8-202ENST00000543872 ATP10DQ9P241 1426 aa15.07■□□□□ 0
SMG8-202ENST00000543872 MRVI1Q9Y6F6 885 aa15.06■□□□□ 0
SMG8-202ENST00000543872 PPRC1Q5VV67 1664 aaKnown RBP15.06■□□□□ 0
SMG8-202ENST00000543872 REREQ9P2R6 1566 aa15.06■□□□□ 0
SMG8-202ENST00000543872 USP27XA6NNY8 438 aa15.06■□□□□ 0
SMG8-202ENST00000543872 ZNF853P0CG23 659 aa15.06■□□□□ 0
SMG8-202ENST00000543872 GJB2P29033 226 aa15.06■□□□□ 0
SMG8-202ENST00000543872 SLC4A2P04920 1241 aa15.05■□□□□ 0
SMG8-202ENST00000543872 NOL10Q9BSC4 688 aaKnown RBP15.05■□□□□ 0
SMG8-202ENST00000543872 TNMDQ9H2S6 317 aa15.05■□□□□ 0
SMG8-202ENST00000543872 IL1RAPL2Q9NP60 686 aa15.05■□□□□ 0
SMG8-202ENST00000543872 POLKQ9UBT6 870 aa15.05■□□□□ 0
SMG8-202ENST00000543872 EMILIN1Q9Y6C2 1016 aa15.05■□□□□ 0
SMG8-202ENST00000543872 MYOM2P54296 1465 aa15.05■□□□□ 0
SMG8-202ENST00000543872 ZNF75DP51815 510 aa15.05■□□□□ -0
SMG8-202ENST00000543872 PTPN14Q15678 1187 aa15.05■□□□□ -0
SMG8-202ENST00000543872 HDGFL2Q7Z4V5 671 aaPredicted RBP15.05■□□□□ -0
SMG8-202ENST00000543872 KIAA1210Q9ULL0 1709 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms