RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 USTQ9Y2C2 406 aa14.06□□□□□ -0.16
MRPS35-204ENST00000542199 CBLBQ13191 982 aa14.05□□□□□ -0.16
MRPS35-204ENST00000542199 TRAIPQ9BWF2 469 aa14.05□□□□□ -0.16
MRPS35-204ENST00000542199 ZFAND3Q9H8U3 227 aa14.05□□□□□ -0.16
MRPS35-204ENST00000542199 SFI1A8K8P3 1242 aa14.04□□□□□ -0.16
MRPS35-204ENST00000542199 WDR4P57081 412 aaKnown RBP14.04□□□□□ -0.16
MRPS35-204ENST00000542199 HPS1Q92902 700 aa14.04□□□□□ -0.16
MRPS35-204ENST00000542199 WDR97A6NE52 1622 aa14.04□□□□□ -0.16
MRPS35-204ENST00000542199 ZIC2O95409 532 aaPredicted RBP14.03□□□□□ -0.16
MRPS35-204ENST00000542199 TIMP2P16035 220 aa14.03□□□□□ -0.16
MRPS35-204ENST00000542199 FAM200AQ8TCP9 573 aa14.03□□□□□ -0.16
MRPS35-204ENST00000542199 ESF1Q9H501 851 aaKnown RBP14.03□□□□□ -0.16
MRPS35-204ENST00000542199 RGS20O76081 388 aa14.02□□□□□ -0.17
MRPS35-204ENST00000542199 PDZRN3Q9UPQ7 1066 aa14.02□□□□□ -0.17
MRPS35-204ENST00000542199 ARHGEF11O15085 1522 aa14.01□□□□□ -0.17
MRPS35-204ENST00000542199 SCNN1DP51172 638 aa14.01□□□□□ -0.17
MRPS35-204ENST00000542199 FAM69CQ0P6D2 419 aa14.01□□□□□ -0.17
MRPS35-204ENST00000542199 RIMBP3CA6NJZ7 1639 aa14.01□□□□□ -0.17
MRPS35-204ENST00000542199 RIMBP3BA6NNM3 1639 aa14.01□□□□□ -0.17
MRPS35-204ENST00000542199 RIMBP3Q9UFD9 1639 aa14.01□□□□□ -0.17
MRPS35-204ENST00000542199 SERBP1Q8NC51 408 aaKnown RBP eCLIP14□□□□□ -0.17
MRPS35-204ENST00000542199 SLAIN2Q9P270 581 aa14□□□□□ -0.17
MRPS35-204ENST00000542199 TMEM229AB2RXF0 380 aa13.99□□□□□ -0.17
MRPS35-204ENST00000542199 LGR5O75473 907 aa13.99□□□□□ -0.17
MRPS35-204ENST00000542199 CYP2U1Q7Z449 544 aa13.99□□□□□ -0.17
MRPS35-204ENST00000542199 RAB6BQ9NRW1 208 aa13.99□□□□□ -0.17
MRPS35-204ENST00000542199 SNAPC4Q5SXM2 1469 aa13.99□□□□□ -0.17
MRPS35-204ENST00000542199 SEC13P55735 322 aa13.98□□□□□ -0.17
MRPS35-204ENST00000542199 KDF1Q8NAX2 398 aaPredicted RBP13.98□□□□□ -0.17
MRPS35-204ENST00000542199 ETNK1Q9HBU6 452 aa13.98□□□□□ -0.17
MRPS35-204ENST00000542199 GRIN2BQ13224 1484 aa13.98□□□□□ -0.17
MRPS35-204ENST00000542199 ADH1AP07327 375 aa13.97□□□□□ -0.17
MRPS35-204ENST00000542199 GDF10P55107 478 aa13.97□□□□□ -0.17
MRPS35-204ENST00000542199 AGBL1Q96MI9 1066 aa13.97□□□□□ -0.17
MRPS35-204ENST00000542199 ARHGEF10LQ9HCE6 1279 aa13.97□□□□□ -0.17
MRPS35-204ENST00000542199 ZNF358Q9NW07 568 aa13.97□□□□□ -0.17
MRPS35-204ENST00000542199 CHD1O14646 1710 aa13.97□□□□□ -0.17
MRPS35-204ENST00000542199 MAGI1Q96QZ7 1491 aaPredicted RBP13.97□□□□□ -0.17
MRPS35-204ENST00000542199 ABCA10Q8WWZ4 1543 aa13.96□□□□□ -0.17
MRPS35-204ENST00000542199 Q6ZVU0 165 aa13.95□□□□□ -0.18
MRPS35-204ENST00000542199 TSEN2Q8NCE0 465 aaKnown RBP13.95□□□□□ -0.18
MRPS35-204ENST00000542199 RBM19Q9Y4C8 960 aaKnown RBP13.95□□□□□ -0.18
MRPS35-204ENST00000542199 TRIM52Q96A61 297 aa13.94□□□□□ -0.18
MRPS35-204ENST00000542199 GAPVD1Q14C86 1478 aa13.93□□□□□ -0.18
MRPS35-204ENST00000542199 FAM187AA6NFU0 413 aa13.93□□□□□ -0.18
MRPS35-204ENST00000542199 PDE4CQ08493 712 aa13.93□□□□□ -0.18
MRPS35-204ENST00000542199 CHMP7Q8WUX9 453 aaPredicted RBP13.93□□□□□ -0.18
MRPS35-204ENST00000542199 SERTAD1Q9UHV2 236 aa13.93□□□□□ -0.18
MRPS35-204ENST00000542199 SYNJ2O15056 1496 aa13.93□□□□□ -0.18
MRPS35-204ENST00000542199 WRNQ14191 1432 aaPredicted RBP eCLIP13.92□□□□□ -0.18
MRPS35-204ENST00000542199 GNRH1P01148 92 aa13.92□□□□□ -0.18
MRPS35-204ENST00000542199 INHAP05111 366 aa13.92□□□□□ -0.18
MRPS35-204ENST00000542199 IL2RAP01589 272 aa13.91□□□□□ -0.18
MRPS35-204ENST00000542199 RELBQ01201 579 aa13.91□□□□□ -0.18
MRPS35-204ENST00000542199 MEIOBQ8N635 442 aa13.91□□□□□ -0.18
MRPS35-204ENST00000542199 CLP1Q92989 425 aaKnown RBP13.91□□□□□ -0.18
MRPS35-204ENST00000542199 CLASP1Q7Z460 1538 aa13.9□□□□□ -0.18
MRPS35-204ENST00000542199 WASLO00401 505 aaPredicted RBP13.9□□□□□ -0.18
MRPS35-204ENST00000542199 SWI5Q1ZZU3 235 aa13.9□□□□□ -0.18
MRPS35-204ENST00000542199 AEBP1Q8IUX7 1158 aa13.9□□□□□ -0.18
MRPS35-204ENST00000542199 ABCA5Q8WWZ7 1642 aa13.9□□□□□ -0.19
MRPS35-204ENST00000542199 ARAP1Q96P48 1450 aa13.89□□□□□ -0.19
MRPS35-204ENST00000542199 TRIM26Q12899 539 aaPredicted RBP13.89□□□□□ -0.19
MRPS35-204ENST00000542199 CYB5RLQ6IPT4 315 aa13.89□□□□□ -0.19
MRPS35-204ENST00000542199 ZNF395Q9H8N7 513 aaPredicted RBP13.89□□□□□ -0.19
MRPS35-204ENST00000542199 TOP2BQ02880 1626 aa13.89□□□□□ -0.19
MRPS35-204ENST00000542199 A0A1W2PRU2 124 aa13.88□□□□□ -0.19
MRPS35-204ENST00000542199 PRMT3O60678 531 aa13.88□□□□□ -0.19
MRPS35-204ENST00000542199 PTGIRP43119 386 aa13.88□□□□□ -0.19
MRPS35-204ENST00000542199 TNS4Q8IZW8 715 aa13.88□□□□□ -0.19
MRPS35-204ENST00000542199 GAS2L2Q8NHY3 880 aa13.88□□□□□ -0.19
MRPS35-204ENST00000542199 PRIMPOLQ96LW4 560 aa13.88□□□□□ -0.19
MRPS35-204ENST00000542199 HINFPQ9BQA5 517 aa13.88□□□□□ -0.19
MRPS35-204ENST00000542199 M0R2N6 131 aa13.87□□□□□ -0.19
MRPS35-204ENST00000542199 CAPN5O15484 640 aaPredicted RBP13.87□□□□□ -0.19
MRPS35-204ENST00000542199 PHLDB3Q6NSJ2 640 aa13.87□□□□□ -0.19
MRPS35-204ENST00000542199 SYNJ1O43426 1573 aa13.87□□□□□ -0.19
MRPS35-204ENST00000542199 BIVM-ERCC5R4GMW8 1640 aa13.86□□□□□ -0.19
MRPS35-204ENST00000542199 CNKSR1Q969H4 720 aa13.86□□□□□ -0.19
MRPS35-204ENST00000542199 GFRA3O60609 400 aa13.85□□□□□ -0.19
MRPS35-204ENST00000542199 BRD1O95696 1058 aa13.85□□□□□ -0.19
MRPS35-204ENST00000542199 ATP2B4P23634 1241 aa13.85□□□□□ -0.19
MRPS35-204ENST00000542199 SCNN1AP37088 669 aa13.85□□□□□ -0.19
MRPS35-204ENST00000542199 EPHA4P54764 986 aa13.85□□□□□ -0.19
MRPS35-204ENST00000542199 OCLNQ16625 522 aa13.85□□□□□ -0.19
MRPS35-204ENST00000542199 ESCO1Q5FWF5 840 aa13.85□□□□□ -0.19
MRPS35-204ENST00000542199 XAGE2Q96GT9 111 aa13.85□□□□□ -0.19
MRPS35-204ENST00000542199 PBRM1Q86U86 1689 aa13.85□□□□□ -0.19
MRPS35-204ENST00000542199 MEN1O00255 615 aa13.84□□□□□ -0.19
MRPS35-204ENST00000542199 CLN3Q13286 438 aa13.84□□□□□ -0.19
MRPS35-204ENST00000542199 SLC4A9Q96Q91 983 aa13.84□□□□□ -0.19
MRPS35-204ENST00000542199 HRH3Q9Y5N1 445 aa13.84□□□□□ -0.19
MRPS35-204ENST00000542199 BACH1O14867 736 aa13.83□□□□□ -0.2
MRPS35-204ENST00000542199 AVPP01185 164 aa13.83□□□□□ -0.2
MRPS35-204ENST00000542199 SSFA2P28290 1259 aa13.83□□□□□ -0.2
MRPS35-204ENST00000542199 ESYT1Q9BSJ8 1104 aa13.83□□□□□ -0.2
MRPS35-204ENST00000542199 USP3Q9Y6I4 520 aa13.83□□□□□ -0.2
MRPS35-204ENST00000542199 TBCELQ5QJ74 424 aa13.82□□□□□ -0.2
MRPS35-204ENST00000542199 LINC00528Q8N1L1 170 aa13.82□□□□□ -0.2
MRPS35-204ENST00000542199 KCTD17Q8N5Z5 321 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms