RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 NEUROD6Q96NK8 337 aa14.69□□□□□ -0.06
KDM3A-216ENST00000542128 HMGB2P26583 209 aaKnown RBP14.69□□□□□ -0.06
KDM3A-216ENST00000542128 CDR1P51861 262 aa14.69□□□□□ -0.06
KDM3A-216ENST00000542128 MVPQ14764 893 aaKnown RBP14.69□□□□□ -0.06
KDM3A-216ENST00000542128 CEP135Q66GS9 1140 aa14.69□□□□□ -0.06
KDM3A-216ENST00000542128 USHBP1Q8N6Y0 703 aa14.69□□□□□ -0.06
KDM3A-216ENST00000542128 NOS1P29475 1434 aa14.68□□□□□ -0.06
KDM3A-216ENST00000542128 KDM2BQ8NHM5 1336 aa14.68□□□□□ -0.06
KDM3A-216ENST00000542128 SNX21Q969T3 373 aa14.68□□□□□ -0.06
KDM3A-216ENST00000542128 LRRFIP2Q9Y608 721 aaKnown RBP14.68□□□□□ -0.06
KDM3A-216ENST00000542128 ZNF445P59923 1031 aa14.68□□□□□ -0.06
KDM3A-216ENST00000542128 CCDC102AQ96A19 550 aa14.68□□□□□ -0.06
KDM3A-216ENST00000542128 KAT6BQ8WYB5 2073 aa14.68□□□□□ -0.06
KDM3A-216ENST00000542128 H3BQV1 296 aa14.68□□□□□ -0.06
KDM3A-216ENST00000542128 IFFO2Q5TF58 517 aa14.68□□□□□ -0.06
KDM3A-216ENST00000542128 AMOTL1Q8IY63 956 aa14.68□□□□□ -0.06
KDM3A-216ENST00000542128 TRMT1Q9NXH9 659 aaKnown RBP14.68□□□□□ -0.06
KDM3A-216ENST00000542128 TMOD3Q9NYL9 352 aa14.68□□□□□ -0.06
KDM3A-216ENST00000542128 A0A1B0GUL7 405 aa14.67□□□□□ -0.06
KDM3A-216ENST00000542128 CCP110O43303 1012 aa14.67□□□□□ -0.06
KDM3A-216ENST00000542128 MYL6BP14649 208 aa14.67□□□□□ -0.06
KDM3A-216ENST00000542128 CCDC30Q5VVM6 783 aa14.67□□□□□ -0.06
KDM3A-216ENST00000542128 CHD1LQ86WJ1 897 aa14.67□□□□□ -0.06
KDM3A-216ENST00000542128 IFIT2P09913 472 aaKnown RBP14.67□□□□□ -0.06
KDM3A-216ENST00000542128 ZSCAN20P17040 1043 aaPredicted RBP14.67□□□□□ -0.06
KDM3A-216ENST00000542128 SMTNL1A8MU46 457 aa14.66□□□□□ -0.06
KDM3A-216ENST00000542128 KCNA6P17658 529 aa14.66□□□□□ -0.06
KDM3A-216ENST00000542128 KRBA2Q6ZNG9 492 aa14.66□□□□□ -0.06
KDM3A-216ENST00000542128 ZBTB9Q96C00 473 aa14.66□□□□□ -0.06
KDM3A-216ENST00000542128 CENPHQ9H3R5 247 aa14.66□□□□□ -0.06
KDM3A-216ENST00000542128 ERLIN1O75477 346 aa14.66□□□□□ -0.06
KDM3A-216ENST00000542128 TPM1P09493 284 aa14.66□□□□□ -0.06
KDM3A-216ENST00000542128 GTF3C6Q969F1 213 aa14.66□□□□□ -0.06
KDM3A-216ENST00000542128 TNMDQ9H2S6 317 aa14.66□□□□□ -0.06
KDM3A-216ENST00000542128 C14orf93Q9H972 538 aaKnown RBP14.66□□□□□ -0.06
KDM3A-216ENST00000542128 GDPD2Q9HCC8 539 aa14.66□□□□□ -0.06
KDM3A-216ENST00000542128 CTDP1Q9Y5B0 961 aaPredicted RBP14.66□□□□□ -0.06
KDM3A-216ENST00000542128 ABCC10Q5T3U5 1492 aa14.66□□□□□ -0.06
KDM3A-216ENST00000542128 NCBP3Q53F19 620 aaKnown RBP14.66□□□□□ -0.06
KDM3A-216ENST00000542128 CCDC70Q6NSX1 233 aa14.66□□□□□ -0.06
KDM3A-216ENST00000542128 SAMD1Q6SPF0 538 aaPredicted RBP14.66□□□□□ -0.06
KDM3A-216ENST00000542128 FAM177A1Q8N128 213 aaPredicted RBP14.66□□□□□ -0.06
KDM3A-216ENST00000542128 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.66□□□□□ -0.06
KDM3A-216ENST00000542128 LRRFIP1Q32MZ4 808 aaKnown RBP14.65□□□□□ -0.06
KDM3A-216ENST00000542128 CREBRFQ8IUR6 639 aa14.65□□□□□ -0.06
KDM3A-216ENST00000542128 CABLES1Q8TDN4 633 aa14.65□□□□□ -0.06
KDM3A-216ENST00000542128 ZNF622Q969S3 477 aaKnown RBP eCLIP14.65□□□□□ -0.061e-7■□□□□ 8.8
KDM3A-216ENST00000542128 SMC2O95347 1197 aa14.65□□□□□ -0.06
KDM3A-216ENST00000542128 IVLP07476 585 aa14.65□□□□□ -0.06
KDM3A-216ENST00000542128 VPS53Q5VIR6 699 aa14.65□□□□□ -0.06
KDM3A-216ENST00000542128 RUFY1Q96T51 708 aa14.65□□□□□ -0.06
KDM3A-216ENST00000542128 LRRC59Q96AG4 307 aaKnown RBP14.64□□□□□ -0.07
KDM3A-216ENST00000542128 ANTXR1Q9H6X2 564 aa14.64□□□□□ -0.07
KDM3A-216ENST00000542128 CHD1O14646 1710 aa14.64□□□□□ -0.07
KDM3A-216ENST00000542128 UHRF1BP1Q6BDS2 1440 aa14.64□□□□□ -0.07
KDM3A-216ENST00000542128 ACEP12821 1306 aa14.64□□□□□ -0.07
KDM3A-216ENST00000542128 STARD3NLO95772 234 aa14.64□□□□□ -0.07
KDM3A-216ENST00000542128 FAM107BQ9H098 131 aa14.64□□□□□ -0.07
KDM3A-216ENST00000542128 CCDC73Q6ZRK6 1079 aa14.64□□□□□ -0.07
KDM3A-216ENST00000542128 TEX2Q8IWB9 1127 aa14.64□□□□□ -0.07
KDM3A-216ENST00000542128 NAT10Q9H0A0 1025 aaKnown RBP14.64□□□□□ -0.07
KDM3A-216ENST00000542128 UBTFL1P0CB47 393 aaPredicted RBP14.63□□□□□ -0.07
KDM3A-216ENST00000542128 IRX5P78411 483 aaPredicted RBP14.63□□□□□ -0.07
KDM3A-216ENST00000542128 GCC1Q96CN9 775 aa14.63□□□□□ -0.07
KDM3A-216ENST00000542128 BTBD11A6QL63 1104 aa14.63□□□□□ -0.07
KDM3A-216ENST00000542128 ANKRD20A12PQ8NF67 263 aa14.63□□□□□ -0.07
KDM3A-216ENST00000542128 NUP62CLQ9H1M0 184 aa14.63□□□□□ -0.07
KDM3A-216ENST00000542128 CLIP2Q9UDT6 1046 aa14.63□□□□□ -0.07
KDM3A-216ENST00000542128 URI1O94763 535 aaPredicted RBP14.62□□□□□ -0.07
KDM3A-216ENST00000542128 ATP2B3Q16720 1220 aa14.62□□□□□ -0.07
KDM3A-216ENST00000542128 CCDC186Q7Z3E2 898 aa14.62□□□□□ -0.07
KDM3A-216ENST00000542128 MAP3K11Q16584 847 aa14.62□□□□□ -0.07
KDM3A-216ENST00000542128 SSR1P43307 286 aaKnown RBP14.62□□□□□ -0.07
KDM3A-216ENST00000542128 SECISBP2LQ93073 1101 aaKnown RBP14.62□□□□□ -0.07
KDM3A-216ENST00000542128 FMNL2Q96PY5 1086 aa14.62□□□□□ -0.07
KDM3A-216ENST00000542128 ZPR1O75312 459 aa14.62□□□□□ -0.07
KDM3A-216ENST00000542128 PTPRKQ15262 1439 aa14.62□□□□□ -0.07
KDM3A-216ENST00000542128 EFCC1Q9HA90 598 aa14.61□□□□□ -0.07
KDM3A-216ENST00000542128 SLU7O95391 586 aaKnown RBP14.61□□□□□ -0.07
KDM3A-216ENST00000542128 EMILIN1Q9Y6C2 1016 aa14.61□□□□□ -0.07
KDM3A-216ENST00000542128 CT47B1P0C2W7 299 aaPredicted RBP14.61□□□□□ -0.07
KDM3A-216ENST00000542128 TWISTNBQ3B726 338 aaPredicted RBP14.61□□□□□ -0.07
KDM3A-216ENST00000542128 DDX11Q96FC9 970 aa14.6□□□□□ -0.07
KDM3A-216ENST00000542128 RIMS2Q9UQ26 1411 aa14.6□□□□□ -0.07
KDM3A-216ENST00000542128 MICALL1Q8N3F8 863 aa14.6□□□□□ -0.07
KDM3A-216ENST00000542128 SDF4Q9BRK5 362 aa14.6□□□□□ -0.07
KDM3A-216ENST00000542128 MARCH6O60337 910 aa14.6□□□□□ -0.07
KDM3A-216ENST00000542128 PLCD4Q9BRC7 762 aa14.6□□□□□ -0.07
KDM3A-216ENST00000542128 SLC4A2P04920 1241 aa14.6□□□□□ -0.07
KDM3A-216ENST00000542128 CAPN2P17655 700 aa14.6□□□□□ -0.07
KDM3A-216ENST00000542128 TMEM51Q9NW97 253 aa14.6□□□□□ -0.07
KDM3A-216ENST00000542128 PCDHB15Q9Y5E8 787 aa14.6□□□□□ -0.07
KDM3A-216ENST00000542128 PDILTQ8N807 584 aa14.59□□□□□ -0.07
KDM3A-216ENST00000542128 CNNM1Q9NRU3 951 aa14.59□□□□□ -0.07
KDM3A-216ENST00000542128 DHX16O60231 1041 aaKnown RBP14.59□□□□□ -0.07
KDM3A-216ENST00000542128 C1orf115Q9H7X2 142 aa14.59□□□□□ -0.07
KDM3A-216ENST00000542128 NSD3Q9BZ95 1437 aa14.59□□□□□ -0.07
KDM3A-216ENST00000542128 FYB1O15117 783 aa14.59□□□□□ -0.07
KDM3A-216ENST00000542128 CAMK4Q16566 473 aa14.59□□□□□ -0.07
KDM3A-216ENST00000542128 TBX22Q9Y458 520 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms