RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 CRYBG1Q9Y4K1 1723 aa11.94□□□□□ -0.5
LCOR-209ENST00000540664 ABCC6O95255 1503 aa11.94□□□□□ -0.5
LCOR-209ENST00000540664 PXDNQ92626 1479 aa11.94□□□□□ -0.5
LCOR-209ENST00000540664 SIPA1L3O60292 1781 aaPredicted RBP11.94□□□□□ -0.5
LCOR-209ENST00000540664 RGPD5Q99666 1765 aa11.94□□□□□ -0.5
LCOR-209ENST00000540664 BECN1Q14457 450 aa11.94□□□□□ -0.5
LCOR-209ENST00000540664 PLEKHO1Q53GL0 409 aaPredicted RBP11.94□□□□□ -0.5
LCOR-209ENST00000540664 ANKRD24Q8TF21 1146 aa11.94□□□□□ -0.5
LCOR-209ENST00000540664 C22orf23Q9BZE7 217 aa11.94□□□□□ -0.5
LCOR-209ENST00000540664 LGR6Q9HBX8 967 aa11.94□□□□□ -0.5
LCOR-209ENST00000540664 COL18A1P39060 1754 aa11.93□□□□□ -0.5
LCOR-209ENST00000540664 F6X3S4 739 aa11.93□□□□□ -0.5
LCOR-209ENST00000540664 EIF4A1P60842 406 aaKnown RBP11.93□□□□□ -0.5
LCOR-209ENST00000540664 LMOD2Q6P5Q4 547 aa11.93□□□□□ -0.5
LCOR-209ENST00000540664 CADPS2Q86UW7 1296 aa11.93□□□□□ -0.5
LCOR-209ENST00000540664 AXIN2Q9Y2T1 843 aa11.93□□□□□ -0.5
LCOR-209ENST00000540664 ZBTB7CA1YPR0 619 aa11.92□□□□□ -0.5
LCOR-209ENST00000540664 PLEKHM2Q8IWE5 1019 aa11.92□□□□□ -0.5
LCOR-209ENST00000540664 RBM25P49756 843 aaKnown RBP11.92□□□□□ -0.5
LCOR-209ENST00000540664 MFAP1P55081 439 aaKnown RBP11.92□□□□□ -0.5
LCOR-209ENST00000540664 PLEKHG5O94827 1062 aa11.91□□□□□ -0.5
LCOR-209ENST00000540664 RTL5Q5HYW3 569 aaPredicted RBP11.91□□□□□ -0.5
LCOR-209ENST00000540664 ZNF530Q6P9A1 599 aaPredicted RBP11.91□□□□□ -0.5
LCOR-209ENST00000540664 ERBB3P21860 1342 aa11.91□□□□□ -0.5
LCOR-209ENST00000540664 PLEKHG2Q9H7P9 1386 aa11.91□□□□□ -0.5
LCOR-209ENST00000540664 HEG1Q9ULI3 1381 aa11.91□□□□□ -0.5
LCOR-209ENST00000540664 RNMTO43148 476 aaKnown RBP11.9□□□□□ -0.5
LCOR-209ENST00000540664 FKBP5Q13451 457 aaPredicted RBP11.9□□□□□ -0.5
LCOR-209ENST00000540664 HDGFL1Q5TGJ6 251 aa11.9□□□□□ -0.5
LCOR-209ENST00000540664 SLC4A10Q6U841 1118 aa11.9□□□□□ -0.5
LCOR-209ENST00000540664 DDX17Q92841 729 aaKnown RBP11.9□□□□□ -0.5
LCOR-209ENST00000540664 CHMP4AQ9BY43 222 aa11.9□□□□□ -0.5
LCOR-209ENST00000540664 TBC1D2Q9BYX2 928 aa11.9□□□□□ -0.5
LCOR-209ENST00000540664 HMMRO75330 724 aa11.9□□□□□ -0.51
LCOR-209ENST00000540664 GNAI2P04899 355 aa11.9□□□□□ -0.51
LCOR-209ENST00000540664 GNAI3P08754 354 aa11.9□□□□□ -0.51
LCOR-209ENST00000540664 GSPT1P15170 499 aaKnown RBP11.9□□□□□ -0.51
LCOR-209ENST00000540664 TNS3Q68CZ2 1445 aa11.9□□□□□ -0.51
LCOR-209ENST00000540664 NPHP3Q7Z494 1330 aa11.89□□□□□ -0.51
LCOR-209ENST00000540664 NFKBIBQ15653 356 aa11.89□□□□□ -0.51
LCOR-209ENST00000540664 TTC22Q5TAA0 569 aa11.89□□□□□ -0.51
LCOR-209ENST00000540664 TBC1D9Q6ZT07 1266 aa11.89□□□□□ -0.51
LCOR-209ENST00000540664 MPRIPQ6WCQ1 1025 aa11.88□□□□□ -0.51
LCOR-209ENST00000540664 ANTXR1Q9H6X2 564 aa11.88□□□□□ -0.51
LCOR-209ENST00000540664 ZNF335Q9H4Z2 1342 aaPredicted RBP11.88□□□□□ -0.51
LCOR-209ENST00000540664 BTBD11A6QL63 1104 aa11.88□□□□□ -0.51
LCOR-209ENST00000540664 TEFQ10587 303 aa11.88□□□□□ -0.51
LCOR-209ENST00000540664 NECTIN2Q92692 538 aa11.88□□□□□ -0.51
LCOR-209ENST00000540664 KCNQ3O43525 872 aa11.87□□□□□ -0.51
LCOR-209ENST00000540664 CDC45O75419 566 aa11.87□□□□□ -0.51
LCOR-209ENST00000540664 C1orf141Q5JVX7 400 aa11.87□□□□□ -0.51
LCOR-209ENST00000540664 C16orf71Q8IYS4 520 aaPredicted RBP11.87□□□□□ -0.51
LCOR-209ENST00000540664 PHAXQ9H814 394 aaKnown RBP11.87□□□□□ -0.51
LCOR-209ENST00000540664 SCN11AQ9UI33 1791 aa11.87□□□□□ -0.51
LCOR-209ENST00000540664 ATP8B2P98198 1209 aa11.87□□□□□ -0.51
LCOR-209ENST00000540664 USP44Q9H0E7 712 aa11.87□□□□□ -0.51
LCOR-209ENST00000540664 OSBPL3Q9H4L5 887 aa11.87□□□□□ -0.51
LCOR-209ENST00000540664 TUBGCP6Q96RT7 1819 aa11.86□□□□□ -0.51
LCOR-209ENST00000540664 OTUD7AQ8TE49 926 aaPredicted RBP11.86□□□□□ -0.51
LCOR-209ENST00000540664 EIF5BO60841 1220 aaKnown RBP11.86□□□□□ -0.51
LCOR-209ENST00000540664 DEKP35659 375 aaKnown RBP11.86□□□□□ -0.51
LCOR-209ENST00000540664 ZC3H6P61129 1189 aaKnown RBP11.86□□□□□ -0.51
LCOR-209ENST00000540664 SPATA31A3Q5VYP0 1347 aa11.86□□□□□ -0.51
LCOR-209ENST00000540664 SALL3Q9BXA9 1300 aa11.86□□□□□ -0.51
LCOR-209ENST00000540664 PKD1L3Q7Z443 1732 aa11.86□□□□□ -0.51
LCOR-209ENST00000540664 CPDO75976 1380 aa11.85□□□□□ -0.51
LCOR-209ENST00000540664 SMARCA5O60264 1052 aaPredicted RBP11.85□□□□□ -0.51
LCOR-209ENST00000540664 SNX21Q969T3 373 aa11.85□□□□□ -0.51
LCOR-209ENST00000540664 KIF2CQ99661 725 aa11.85□□□□□ -0.51
LCOR-209ENST00000540664 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.85□□□□□ -0.512e-7■□□□□ 8.9
LCOR-209ENST00000540664 CHPF2Q9P2E5 772 aa11.85□□□□□ -0.51
LCOR-209ENST00000540664 GIGYF1O75420 1035 aaPredicted RBP11.84□□□□□ -0.51
LCOR-209ENST00000540664 BRINP3Q76B58 766 aa11.84□□□□□ -0.51
LCOR-209ENST00000540664 MEGF6O75095 1541 aa11.84□□□□□ -0.51
LCOR-209ENST00000540664 PNMA6EA0A0J9YXQ4 647 aa11.84□□□□□ -0.51
LCOR-209ENST00000540664 BEND3Q5T5X7 828 aa11.84□□□□□ -0.51
LCOR-209ENST00000540664 ADCY9O60503 1353 aa11.84□□□□□ -0.51
LCOR-209ENST00000540664 IBTKQ9P2D0 1353 aaPredicted RBP11.84□□□□□ -0.51
LCOR-209ENST00000540664 KDM6AO15550 1401 aaPredicted RBP11.84□□□□□ -0.51
LCOR-209ENST00000540664 MRC1P22897 1456 aa11.84□□□□□ -0.51
LCOR-209ENST00000540664 EIF2S2P20042 333 aaKnown RBP11.83□□□□□ -0.52
LCOR-209ENST00000540664 SSH3Q8TE77 659 aa11.83□□□□□ -0.52
LCOR-209ENST00000540664 SRCIN1Q9C0H9 1055 aa11.83□□□□□ -0.52
LCOR-209ENST00000540664 DBF4Q9UBU7 674 aaPredicted RBP11.83□□□□□ -0.52
LCOR-209ENST00000540664 LRRFIP2Q9Y608 721 aaKnown RBP11.83□□□□□ -0.52
LCOR-209ENST00000540664 DNAAF4Q8WXU2 420 aa11.83□□□□□ -0.52
LCOR-209ENST00000540664 UBTFL1P0CB47 393 aaPredicted RBP11.82□□□□□ -0.52
LCOR-209ENST00000540664 SDSP20132 328 aa11.82□□□□□ -0.52
LCOR-209ENST00000540664 POLA2Q14181 598 aa11.82□□□□□ -0.52
LCOR-209ENST00000540664 CABLES1Q8TDN4 633 aa11.82□□□□□ -0.52
LCOR-209ENST00000540664 PHKG2P15735 406 aa11.82□□□□□ -0.52
LCOR-209ENST00000540664 PDE1AP54750 535 aa11.82□□□□□ -0.52
LCOR-209ENST00000540664 RAPGEF4Q8WZA2 1011 aa11.82□□□□□ -0.52
LCOR-209ENST00000540664 LRRCC1Q9C099 1032 aa11.82□□□□□ -0.52
LCOR-209ENST00000540664 EXOC6BQ9Y2D4 811 aa11.82□□□□□ -0.52
LCOR-209ENST00000540664 PARP4Q9UKK3 1724 aaKnown RBP11.81□□□□□ -0.52
LCOR-209ENST00000540664 C5P01031 1676 aa11.81□□□□□ -0.52
LCOR-209ENST00000540664 PI4KAP2A4QPH2 592 aa11.81□□□□□ -0.52
LCOR-209ENST00000540664 FRAT2O75474 233 aaPredicted RBP11.81□□□□□ -0.52
LCOR-209ENST00000540664 TATP17735 454 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms