RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 REC8O95072 547 aa17.28■□□□□ 0.36
INO80E-203ENST00000540562 DLC1Q96QB1 1528 aa17.28■□□□□ 0.36
INO80E-203ENST00000540562 TMEM2Q9UHN6 1383 aa17.27■□□□□ 0.36
INO80E-203ENST00000540562 SYCE3A1L190 88 aa17.27■□□□□ 0.36
INO80E-203ENST00000540562 LGR6Q9HBX8 967 aa17.27■□□□□ 0.36
INO80E-203ENST00000540562 OS9Q13438 667 aaPredicted RBP17.27■□□□□ 0.36
INO80E-203ENST00000540562 KCNA6P17658 529 aa17.27■□□□□ 0.35
INO80E-203ENST00000540562 ZDHHC9Q9Y397 364 aa17.27■□□□□ 0.35
INO80E-203ENST00000540562 PRIM1P49642 420 aaKnown RBP17.26■□□□□ 0.35
INO80E-203ENST00000540562 TMX3Q96JJ7 454 aa17.26■□□□□ 0.35
INO80E-203ENST00000540562 PTPRCP08575 1304 aa17.26■□□□□ 0.35
INO80E-203ENST00000540562 GNAT3A8MTJ3 354 aa17.26■□□□□ 0.35
INO80E-203ENST00000540562 UBTFL1P0CB47 393 aaPredicted RBP17.26■□□□□ 0.35
INO80E-203ENST00000540562 MPRIPQ6WCQ1 1025 aa17.26■□□□□ 0.35
INO80E-203ENST00000540562 USP6P35125 1406 aa17.25■□□□□ 0.35
INO80E-203ENST00000540562 NBPF7P0C2Y1 421 aaPredicted RBP17.25■□□□□ 0.35
INO80E-203ENST00000540562 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
INO80E-203ENST00000540562 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
INO80E-203ENST00000540562 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
INO80E-203ENST00000540562 ZSCAN23Q3MJ62 389 aa17.25■□□□□ 0.35
INO80E-203ENST00000540562 SPG7Q9UQ90 795 aa17.25■□□□□ 0.35
INO80E-203ENST00000540562 CCDC9Q9Y3X0 531 aaKnown RBP17.25■□□□□ 0.35
INO80E-203ENST00000540562 CCT4P50991 539 aaKnown RBP17.24■□□□□ 0.35
INO80E-203ENST00000540562 GPT2Q8TD30 523 aa17.24■□□□□ 0.35
INO80E-203ENST00000540562 CDC42BPGQ6DT37 1551 aa17.24■□□□□ 0.35
INO80E-203ENST00000540562 SRGAP3O43295 1099 aa17.24■□□□□ 0.35
INO80E-203ENST00000540562 ANP32BQ92688 251 aaKnown RBP17.24■□□□□ 0.35
INO80E-203ENST00000540562 CRB1P82279 1406 aa17.24■□□□□ 0.35
INO80E-203ENST00000540562 AIMP1Q12904 312 aaKnown RBP17.24■□□□□ 0.35
INO80E-203ENST00000540562 CCDC30Q5VVM6 783 aa17.24■□□□□ 0.35
INO80E-203ENST00000540562 PPP1R42Q7Z4L9 355 aa17.24■□□□□ 0.35
INO80E-203ENST00000540562 RBSNQ9H1K0 784 aa17.24■□□□□ 0.35
INO80E-203ENST00000540562 LMBRD1Q9NUN5 540 aa17.24■□□□□ 0.35
INO80E-203ENST00000540562 PRAMEF22A3QJZ6 481 aa17.23■□□□□ 0.35
INO80E-203ENST00000540562 HAP1P54257 671 aaPredicted RBP17.23■□□□□ 0.35
INO80E-203ENST00000540562 CWC27Q6UX04 472 aaKnown RBP17.23■□□□□ 0.35
INO80E-203ENST00000540562 CHPF2Q9P2E5 772 aa17.23■□□□□ 0.35
INO80E-203ENST00000540562 SKOR2Q2VWA4 1001 aaPredicted RBP17.23■□□□□ 0.35
INO80E-203ENST00000540562 JARID2Q92833 1246 aaPredicted RBP17.23■□□□□ 0.35
INO80E-203ENST00000540562 HOXC9P31274 260 aa17.22■□□□□ 0.35
INO80E-203ENST00000540562 TAF7Q15545 349 aaPredicted RBP17.22■□□□□ 0.35
INO80E-203ENST00000540562 ESYT1Q9BSJ8 1104 aa17.22■□□□□ 0.35
INO80E-203ENST00000540562 USP44Q9H0E7 712 aa17.22■□□□□ 0.35
INO80E-203ENST00000540562 CEP170BQ9Y4F5 1589 aaPredicted RBP17.22■□□□□ 0.35
INO80E-203ENST00000540562 PIP4K2AP48426 406 aaPredicted RBP17.22■□□□□ 0.35
INO80E-203ENST00000540562 PTPRUQ92729 1446 aa17.22■□□□□ 0.35
INO80E-203ENST00000540562 NRXN3Q9Y4C0 1643 aa17.22■□□□□ 0.35
INO80E-203ENST00000540562 PLEKHG3A1L390 1219 aa17.22■□□□□ 0.35
INO80E-203ENST00000540562 PI4KAP2A4QPH2 592 aa17.22■□□□□ 0.35
INO80E-203ENST00000540562 NUCB2P80303 420 aa17.22■□□□□ 0.35
INO80E-203ENST00000540562 KLHL40Q2TBA0 621 aa17.22■□□□□ 0.35
INO80E-203ENST00000540562 PI4KAP1Q8N8J0 262 aa17.22■□□□□ 0.35
INO80E-203ENST00000540562 PA2G4Q9UQ80 394 aaKnown RBP17.22■□□□□ 0.35
INO80E-203ENST00000540562 PLCB2Q00722 1185 aa17.21■□□□□ 0.35
INO80E-203ENST00000540562 TMEM63CQ9P1W3 806 aa17.21■□□□□ 0.35
INO80E-203ENST00000540562 ADAMTS13Q76LX8 1427 aa17.21■□□□□ 0.35
INO80E-203ENST00000540562 FLT4P35916 1363 aa17.21■□□□□ 0.34
INO80E-203ENST00000540562 CHMLP26374 656 aa17.2■□□□□ 0.34
INO80E-203ENST00000540562 CHMP3Q9Y3E7 222 aa17.2■□□□□ 0.34
INO80E-203ENST00000540562 OVOS2A0A0J9YW53 1432 aa17.19■□□□□ 0.34
INO80E-203ENST00000540562 OVOS2Q6IE36 1432 aa17.19■□□□□ 0.34
INO80E-203ENST00000540562 CLCN1P35523 988 aa17.19■□□□□ 0.34
INO80E-203ENST00000540562 ESCO1Q5FWF5 840 aa17.19■□□□□ 0.34
INO80E-203ENST00000540562 SIL1Q9H173 461 aa17.19■□□□□ 0.34
INO80E-203ENST00000540562 SOS1Q07889 1333 aaPredicted RBP17.18■□□□□ 0.34
INO80E-203ENST00000540562 GADD45BO75293 160 aaPredicted RBP17.18■□□□□ 0.34
INO80E-203ENST00000540562 GNAI3P08754 354 aa17.18■□□□□ 0.34
INO80E-203ENST00000540562 NBPF6Q5VWK0 638 aa17.18■□□□□ 0.34
INO80E-203ENST00000540562 NBPF4Q96M43 638 aa17.18■□□□□ 0.34
INO80E-203ENST00000540562 TCEANC2Q96MN5 208 aa17.18■□□□□ 0.34
INO80E-203ENST00000540562 PEAK1Q9H792 1746 aa17.18■□□□□ 0.34
INO80E-203ENST00000540562 KIAA0232Q92628 1395 aa17.17■□□□□ 0.34
INO80E-203ENST00000540562 ATP8B2P98198 1209 aa17.17■□□□□ 0.34
INO80E-203ENST00000540562 CWF19L2Q2TBE0 894 aaKnown RBP17.17■□□□□ 0.34
INO80E-203ENST00000540562 SPATA31D1Q6ZQQ2 1576 aa17.17■□□□□ 0.34
INO80E-203ENST00000540562 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.17■□□□□ 0.34
INO80E-203ENST00000540562 PROSER3Q2NL68 480 aa17.17■□□□□ 0.34
INO80E-203ENST00000540562 DIP2BQ9P265 1576 aa17.17■□□□□ 0.34
INO80E-203ENST00000540562 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.17■□□□□ 0.34
INO80E-203ENST00000540562 MCCP23508 829 aa17.16■□□□□ 0.34
INO80E-203ENST00000540562 KLHDC4Q8TBB5 520 aa17.16■□□□□ 0.34
INO80E-203ENST00000540562 PPP6R1Q9UPN7 881 aa17.16■□□□□ 0.34
INO80E-203ENST00000540562 TEFQ10587 303 aa17.16■□□□□ 0.34
INO80E-203ENST00000540562 SRCIN1Q9C0H9 1055 aa17.16■□□□□ 0.34
INO80E-203ENST00000540562 MSNP26038 577 aaKnown RBP17.15■□□□□ 0.34
INO80E-203ENST00000540562 IGSF1Q8N6C5 1336 aa17.15■□□□□ 0.34
INO80E-203ENST00000540562 SBNO1A3KN83 1393 aa17.15■□□□□ 0.34
INO80E-203ENST00000540562 PSME1Q06323 249 aa17.15■□□□□ 0.34
INO80E-203ENST00000540562 ZNF530Q6P9A1 599 aaPredicted RBP17.15■□□□□ 0.34
INO80E-203ENST00000540562 NDUFB9Q9Y6M9 179 aa17.15■□□□□ 0.34
INO80E-203ENST00000540562 SETD1AO15047 1707 aaKnown RBP17.14■□□□□ 0.34
INO80E-203ENST00000540562 RBM10P98175 930 aaKnown RBP17.14■□□□□ 0.33
INO80E-203ENST00000540562 RASEFQ8IZ41 740 aa17.14■□□□□ 0.33
INO80E-203ENST00000540562 RHPN1Q8TCX5 695 aa17.14■□□□□ 0.33
INO80E-203ENST00000540562 FIBPO43427 364 aa17.14■□□□□ 0.33
INO80E-203ENST00000540562 CYP2E1P05181 493 aaPredicted RBP17.13■□□□□ 0.33
INO80E-203ENST00000540562 COL9A3Q14050 684 aaPredicted RBP17.13■□□□□ 0.33
INO80E-203ENST00000540562 C9orf78Q9NZ63 289 aaPredicted RBP17.13■□□□□ 0.33
INO80E-203ENST00000540562 TAOK2Q9UL54 1235 aa17.13■□□□□ 0.33
INO80E-203ENST00000540562 ITSN1Q15811 1721 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms