RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 PUS7Q96PZ0 661 aaKnown RBP11.73□□□□□ -0.53
LDHA-218ENST00000540430 NPC1L1Q9UHC9 1359 aa11.73□□□□□ -0.53
LDHA-218ENST00000540430 PLSCR1O15162 318 aa11.72□□□□□ -0.53
LDHA-218ENST00000540430 ARXQ96QS3 562 aa11.72□□□□□ -0.53
LDHA-218ENST00000540430 BCL11BQ9C0K0 894 aaPredicted RBP11.72□□□□□ -0.53
LDHA-218ENST00000540430 SKOR2Q2VWA4 1001 aaPredicted RBP11.72□□□□□ -0.53
LDHA-218ENST00000540430 MARCH10Q8NA82 808 aaPredicted RBP11.72□□□□□ -0.53
LDHA-218ENST00000540430 EDC4Q6P2E9 1401 aaKnown RBP11.72□□□□□ -0.53
LDHA-218ENST00000540430 BCAR3O75815 825 aa11.71□□□□□ -0.53
LDHA-218ENST00000540430 NME9Q86XW9 330 aa11.71□□□□□ -0.53
LDHA-218ENST00000540430 SLC12A5Q9H2X9 1139 aa11.71□□□□□ -0.53
LDHA-218ENST00000540430 TERF2IPQ9NYB0 399 aa11.71□□□□□ -0.53
LDHA-218ENST00000540430 EXOC5O00471 708 aa11.7□□□□□ -0.54
LDHA-218ENST00000540430 LTN1O94822 1766 aa11.7□□□□□ -0.54
LDHA-218ENST00000540430 ERBB3P21860 1342 aa11.7□□□□□ -0.54
LDHA-218ENST00000540430 CCDC173Q0VFZ6 552 aa11.7□□□□□ -0.54
LDHA-218ENST00000540430 KIAA1211Q6ZU35 1233 aa11.7□□□□□ -0.54
LDHA-218ENST00000540430 PPP1R9BQ96SB3 815 aa11.7□□□□□ -0.54
LDHA-218ENST00000540430 CIZ1Q9ULV3 898 aaPredicted RBP11.7□□□□□ -0.54
LDHA-218ENST00000540430 KNSTRNQ9Y448 316 aa11.7□□□□□ -0.54
LDHA-218ENST00000540430 A0A1W2PP64 1363 aa11.7□□□□□ -0.54
LDHA-218ENST00000540430 TNS2Q63HR2 1409 aa11.69□□□□□ -0.54
LDHA-218ENST00000540430 OFD1O75665 1012 aa11.69□□□□□ -0.54
LDHA-218ENST00000540430 DDIT3P35638 169 aa11.69□□□□□ -0.54
LDHA-218ENST00000540430 AMER1Q5JTC6 1135 aaPredicted RBP11.69□□□□□ -0.54
LDHA-218ENST00000540430 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.69□□□□□ -0.54
LDHA-218ENST00000540430 PTF1AQ7RTS3 328 aa11.69□□□□□ -0.54
LDHA-218ENST00000540430 ZSCAN30Q86W11 494 aa11.68□□□□□ -0.54
LDHA-218ENST00000540430 C22orf23Q9BZE7 217 aa11.68□□□□□ -0.54
LDHA-218ENST00000540430 SPINK5Q9NQ38 1064 aaPredicted RBP11.68□□□□□ -0.54
LDHA-218ENST00000540430 IBTKQ9P2D0 1353 aaPredicted RBP11.68□□□□□ -0.54
LDHA-218ENST00000540430 PDIA4P13667 645 aaKnown RBP11.68□□□□□ -0.54
LDHA-218ENST00000540430 MTERF4Q7Z6M4 381 aaKnown RBP11.68□□□□□ -0.54
LDHA-218ENST00000540430 NLRP2Q9NX02 1062 aa11.68□□□□□ -0.54
LDHA-218ENST00000540430 GBP4Q96PP9 640 aa11.67□□□□□ -0.54
LDHA-218ENST00000540430 SPON1Q9HCB6 807 aa11.67□□□□□ -0.54
LDHA-218ENST00000540430 HS1BP3Q53T59 392 aa11.66□□□□□ -0.54
LDHA-218ENST00000540430 HSCBQ8IWL3 235 aa11.66□□□□□ -0.54
LDHA-218ENST00000540430 ANKRD24Q8TF21 1146 aa11.66□□□□□ -0.54
LDHA-218ENST00000540430 RWDD1Q9H446 243 aaPredicted RBP11.66□□□□□ -0.54
LDHA-218ENST00000540430 KCNQ2O43526 872 aa11.66□□□□□ -0.54
LDHA-218ENST00000540430 IL2RBP14784 551 aa11.66□□□□□ -0.54
LDHA-218ENST00000540430 PROM2Q8N271 834 aa11.66□□□□□ -0.54
LDHA-218ENST00000540430 SNX21Q969T3 373 aa11.66□□□□□ -0.54
LDHA-218ENST00000540430 PDZRN3Q9UPQ7 1066 aa11.66□□□□□ -0.54
LDHA-218ENST00000540430 COG6Q9Y2V7 657 aa11.66□□□□□ -0.54
LDHA-218ENST00000540430 CANXP27824 592 aaKnown RBP11.65□□□□□ -0.54
LDHA-218ENST00000540430 CDCA8Q53HL2 280 aa11.65□□□□□ -0.54
LDHA-218ENST00000540430 APAF1O14727 1248 aa11.65□□□□□ -0.54
LDHA-218ENST00000540430 NHSQ6T4R5 1651 aa11.65□□□□□ -0.55
LDHA-218ENST00000540430 TXNRD1Q16881 649 aa11.64□□□□□ -0.55
LDHA-218ENST00000540430 GAS2L3Q86XJ1 694 aa11.64□□□□□ -0.55
LDHA-218ENST00000540430 SMC5Q8IY18 1101 aa11.64□□□□□ -0.55
LDHA-218ENST00000540430 PANK1Q8TE04 598 aa11.64□□□□□ -0.55
LDHA-218ENST00000540430 IP6K1Q92551 441 aa11.64□□□□□ -0.55
LDHA-218ENST00000540430 ANP32BQ92688 251 aaKnown RBP11.64□□□□□ -0.55
LDHA-218ENST00000540430 PPP1R1BQ9UD71 204 aaPredicted RBP11.64□□□□□ -0.55
LDHA-218ENST00000540430 CASZ1Q86V15 1759 aa11.64□□□□□ -0.55
LDHA-218ENST00000540430 FAM208AQ9UK61 1670 aaKnown RBP11.63□□□□□ -0.55
LDHA-218ENST00000540430 MSNP26038 577 aaKnown RBP11.63□□□□□ -0.55
LDHA-218ENST00000540430 SMAP1Q8IYB5 467 aaPredicted RBP11.63□□□□□ -0.55
LDHA-218ENST00000540430 SPRYD3Q8NCJ5 442 aa11.63□□□□□ -0.55
LDHA-218ENST00000540430 COG3Q96JB2 828 aa11.63□□□□□ -0.55
LDHA-218ENST00000540430 PCDHB15Q9Y5E8 787 aa11.63□□□□□ -0.55
LDHA-218ENST00000540430 ANKRD36BQ8N2N9 1353 aa11.63□□□□□ -0.55
LDHA-218ENST00000540430 RIPK4P57078 832 aa11.63□□□□□ -0.55
LDHA-218ENST00000540430 RAB3GAP1Q15042 981 aa11.63□□□□□ -0.55
LDHA-218ENST00000540430 TNPO1Q92973 898 aaKnown RBP11.62□□□□□ -0.55
LDHA-218ENST00000540430 KAT6BQ8WYB5 2073 aa11.62□□□□□ -0.55
LDHA-218ENST00000540430 RBM25P49756 843 aaKnown RBP11.61□□□□□ -0.55
LDHA-218ENST00000540430 STK32BQ9NY57 414 aa11.61□□□□□ -0.55
LDHA-218ENST00000540430 NASPP49321 788 aaPredicted RBP11.61□□□□□ -0.55
LDHA-218ENST00000540430 CLEC17AQ6ZS10 378 aa11.61□□□□□ -0.55
LDHA-218ENST00000540430 CCDC146Q8IYE0 955 aa11.61□□□□□ -0.55
LDHA-218ENST00000540430 ACSBG1Q96GR2 724 aa11.61□□□□□ -0.55
LDHA-218ENST00000540430 MYOM1P52179 1685 aa11.6□□□□□ -0.55
LDHA-218ENST00000540430 MAP3K19Q56UN5 1328 aa11.6□□□□□ -0.55
LDHA-218ENST00000540430 ZNF500O60304 480 aaPredicted RBP11.6□□□□□ -0.55
LDHA-218ENST00000540430 RARSP54136 660 aaKnown RBP11.6□□□□□ -0.55
LDHA-218ENST00000540430 SLC15A2Q16348 729 aa11.6□□□□□ -0.55
LDHA-218ENST00000540430 HOXC9P31274 260 aa11.6□□□□□ -0.55
LDHA-218ENST00000540430 WWC1Q8IX03 1113 aa11.6□□□□□ -0.55
LDHA-218ENST00000540430 BTAF1O14981 1849 aa11.6□□□□□ -0.55
LDHA-218ENST00000540430 AMPHP49418 695 aa11.59□□□□□ -0.55
LDHA-218ENST00000540430 LTV1Q96GA3 475 aaPredicted RBP11.59□□□□□ -0.55
LDHA-218ENST00000540430 PDGFDQ9GZP0 370 aaPredicted RBP11.59□□□□□ -0.55
LDHA-218ENST00000540430 RTL1A6NKG5 1358 aa11.59□□□□□ -0.55
LDHA-218ENST00000540430 MFAP1P55081 439 aaKnown RBP11.59□□□□□ -0.55
LDHA-218ENST00000540430 DYNC1I1O14576 645 aa11.58□□□□□ -0.56
LDHA-218ENST00000540430 ZBTB7AO95365 584 aa11.58□□□□□ -0.56
LDHA-218ENST00000540430 KLHL40Q2TBA0 621 aa11.58□□□□□ -0.56
LDHA-218ENST00000540430 NOL7Q9UMY1 257 aaKnown RBP11.58□□□□□ -0.56
LDHA-218ENST00000540430 GOLGA6L22H0YM25 854 aa11.58□□□□□ -0.56
LDHA-218ENST00000540430 FYB1O15117 783 aa11.58□□□□□ -0.56
LDHA-218ENST00000540430 MCM5P33992 734 aa11.58□□□□□ -0.56
LDHA-218ENST00000540430 NCBP3Q53F19 620 aaKnown RBP11.58□□□□□ -0.56
LDHA-218ENST00000540430 PAPPAQ13219 1627 aa11.57□□□□□ -0.56
LDHA-218ENST00000540430 DCAF8L1A6NGE4 600 aa11.57□□□□□ -0.56
LDHA-218ENST00000540430 FBLN1P23142 703 aa11.57□□□□□ -0.56
LDHA-218ENST00000540430 CSPP1Q1MSJ5 1256 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms