RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 TSHZ3Q63HK5 1081 aa14.29□□□□□ -0.12
C11orf54-214ENST00000540113 NBPF4Q96M43 638 aa14.29□□□□□ -0.12
C11orf54-214ENST00000540113 MED1Q15648 1581 aaPredicted RBP14.28□□□□□ -0.12
C11orf54-214ENST00000540113 SLIT3O75094 1523 aa14.28□□□□□ -0.12
C11orf54-214ENST00000540113 SNX21Q969T3 373 aa14.28□□□□□ -0.12
C11orf54-214ENST00000540113 HSP90AA1P07900 732 aaKnown RBP14.27□□□□□ -0.12
C11orf54-214ENST00000540113 SDSP20132 328 aa14.27□□□□□ -0.12
C11orf54-214ENST00000540113 XPCQ01831 940 aaPredicted RBP14.27□□□□□ -0.12
C11orf54-214ENST00000540113 N4BP2Q86UW6 1770 aaPredicted RBP14.27□□□□□ -0.12
C11orf54-214ENST00000540113 DDIT3P35638 169 aa14.27□□□□□ -0.13
C11orf54-214ENST00000540113 EXOC6BQ9Y2D4 811 aa14.27□□□□□ -0.13
C11orf54-214ENST00000540113 FKBP5Q13451 457 aaPredicted RBP14.26□□□□□ -0.13
C11orf54-214ENST00000540113 LMO7Q8WWI1 1683 aa14.26□□□□□ -0.13
C11orf54-214ENST00000540113 TNPO1Q92973 898 aaKnown RBP14.26□□□□□ -0.13
C11orf54-214ENST00000540113 STK31Q9BXU1 1019 aa14.26□□□□□ -0.13
C11orf54-214ENST00000540113 NCOA3Q9Y6Q9 1424 aa14.26□□□□□ -0.13
C11orf54-214ENST00000540113 CEMIPQ8WUJ3 1361 aa14.26□□□□□ -0.13
C11orf54-214ENST00000540113 TRAK2O60296 914 aa14.25□□□□□ -0.13
C11orf54-214ENST00000540113 TAF7Q15545 349 aaPredicted RBP14.25□□□□□ -0.13
C11orf54-214ENST00000540113 LRRC59Q96AG4 307 aaKnown RBP14.25□□□□□ -0.13
C11orf54-214ENST00000540113 KDM3BQ7LBC6 1761 aa14.25□□□□□ -0.13
C11orf54-214ENST00000540113 CACNA1FO60840 1977 aa14.25□□□□□ -0.13
C11orf54-214ENST00000540113 FLIIQ13045 1269 aa14.25□□□□□ -0.13
C11orf54-214ENST00000540113 KCNH5Q8NCM2 988 aa14.25□□□□□ -0.13
C11orf54-214ENST00000540113 K7ELQ4 463 aaPredicted RBP14.24□□□□□ -0.13
C11orf54-214ENST00000540113 CCT4P50991 539 aaKnown RBP14.24□□□□□ -0.13
C11orf54-214ENST00000540113 PROSER2Q86WR7 435 aaPredicted RBP14.24□□□□□ -0.13
C11orf54-214ENST00000540113 NCAPD2Q15021 1401 aa14.24□□□□□ -0.13
C11orf54-214ENST00000540113 PNMA6EA0A0J9YXQ4 647 aa14.23□□□□□ -0.13
C11orf54-214ENST00000540113 HSPA2P54652 639 aa14.23□□□□□ -0.13
C11orf54-214ENST00000540113 CCDC30Q5VVM6 783 aa14.23□□□□□ -0.13
C11orf54-214ENST00000540113 USP26Q9BXU7 913 aa14.23□□□□□ -0.13
C11orf54-214ENST00000540113 BABAM1Q9NWV8 329 aa14.23□□□□□ -0.13
C11orf54-214ENST00000540113 CAMTA1Q9Y6Y1 1673 aa14.23□□□□□ -0.13
C11orf54-214ENST00000540113 PXDNQ92626 1479 aa14.23□□□□□ -0.13
C11orf54-214ENST00000540113 KIF1AQ12756 1690 aa14.23□□□□□ -0.13
C11orf54-214ENST00000540113 ARHGEF25Q86VW2 580 aa14.23□□□□□ -0.13
C11orf54-214ENST00000540113 PHAXQ9H814 394 aaKnown RBP14.23□□□□□ -0.13
C11orf54-214ENST00000540113 LGR6Q9HBX8 967 aa14.23□□□□□ -0.13
C11orf54-214ENST00000540113 C1orf167Q5SNV9 1468 aa14.23□□□□□ -0.13
C11orf54-214ENST00000540113 GCP02774 474 aa14.22□□□□□ -0.13
C11orf54-214ENST00000540113 AK9Q5TCS8 1911 aa14.22□□□□□ -0.13
C11orf54-214ENST00000540113 LMTK3Q96Q04 1460 aa14.22□□□□□ -0.13
C11orf54-214ENST00000540113 GNAI2P04899 355 aa14.22□□□□□ -0.13
C11orf54-214ENST00000540113 EIF2S2P20042 333 aaKnown RBP14.22□□□□□ -0.13
C11orf54-214ENST00000540113 RGPD5Q99666 1765 aa14.22□□□□□ -0.13
C11orf54-214ENST00000540113 STRCP1A6NGW2 1772 aa14.21□□□□□ -0.13
C11orf54-214ENST00000540113 HMMRO75330 724 aa14.21□□□□□ -0.13
C11orf54-214ENST00000540113 SSFA2P28290 1259 aa14.21□□□□□ -0.13
C11orf54-214ENST00000540113 SOS1Q07889 1333 aaPredicted RBP14.21□□□□□ -0.13
C11orf54-214ENST00000540113 ALS2Q96Q42 1657 aa14.21□□□□□ -0.14
C11orf54-214ENST00000540113 LRRFIP2Q9Y608 721 aaKnown RBP14.21□□□□□ -0.14
C11orf54-214ENST00000540113 KCNQ3O43525 872 aa14.2□□□□□ -0.14
C11orf54-214ENST00000540113 PDE1AP54750 535 aa14.2□□□□□ -0.14
C11orf54-214ENST00000540113 PANK2Q9BZ23 570 aa14.2□□□□□ -0.14
C11orf54-214ENST00000540113 PXDNLA1KZ92 1463 aa14.2□□□□□ -0.14
C11orf54-214ENST00000540113 RAB3GAP1Q15042 981 aa14.2□□□□□ -0.14
C11orf54-214ENST00000540113 C19orf44Q9H6X5 657 aa14.2□□□□□ -0.14
C11orf54-214ENST00000540113 ANXA1P04083 346 aa14.19□□□□□ -0.14
C11orf54-214ENST00000540113 XRCC6P12956 609 aaKnown RBP eCLIP14.19□□□□□ -0.14
C11orf54-214ENST00000540113 LMOD2Q6P5Q4 547 aa14.19□□□□□ -0.14
C11orf54-214ENST00000540113 ZNF530Q6P9A1 599 aaPredicted RBP14.19□□□□□ -0.14
C11orf54-214ENST00000540113 KRT28Q7Z3Y7 464 aa14.19□□□□□ -0.14
C11orf54-214ENST00000540113 GOLGA6L3A6NEY3 463 aa14.19□□□□□ -0.14
C11orf54-214ENST00000540113 EIF4A1P60842 406 aaKnown RBP14.19□□□□□ -0.14
C11orf54-214ENST00000540113 HDGFL1Q5TGJ6 251 aa14.19□□□□□ -0.14
C11orf54-214ENST00000540113 ANKRD24Q8TF21 1146 aa14.19□□□□□ -0.14
C11orf54-214ENST00000540113 AXIN2Q9Y2T1 843 aa14.19□□□□□ -0.14
C11orf54-214ENST00000540113 MST1RQ04912 1400 aa14.18□□□□□ -0.14
C11orf54-214ENST00000540113 DDX11L8A8MPP1 907 aa14.17□□□□□ -0.14
C11orf54-214ENST00000540113 AKAP4Q5JQC9 854 aa14.17□□□□□ -0.14
C11orf54-214ENST00000540113 CASC1Q6TDU7 716 aa14.17□□□□□ -0.14
C11orf54-214ENST00000540113 MPRIPQ6WCQ1 1025 aa14.17□□□□□ -0.14
C11orf54-214ENST00000540113 USP44Q9H0E7 712 aa14.17□□□□□ -0.14
C11orf54-214ENST00000540113 IL1RAPL2Q9NP60 686 aa14.17□□□□□ -0.14
C11orf54-214ENST00000540113 TUBGCP6Q96RT7 1819 aa14.17□□□□□ -0.14
C11orf54-214ENST00000540113 SIPA1L3O60292 1781 aaPredicted RBP14.17□□□□□ -0.14
C11orf54-214ENST00000540113 ATP8B2P98198 1209 aa14.16□□□□□ -0.14
C11orf54-214ENST00000540113 PKP1Q13835 747 aa14.16□□□□□ -0.14
C11orf54-214ENST00000540113 RABEP1Q15276 862 aa14.16□□□□□ -0.14
C11orf54-214ENST00000540113 RILPL2Q969X0 211 aa14.16□□□□□ -0.14
C11orf54-214ENST00000540113 LRRCC1Q9C099 1032 aa14.16□□□□□ -0.14
C11orf54-214ENST00000540113 GNAI3P08754 354 aa14.16□□□□□ -0.14
C11orf54-214ENST00000540113 PLEKHO1Q53GL0 409 aaPredicted RBP14.16□□□□□ -0.14
C11orf54-214ENST00000540113 L1TD1Q5T7N2 865 aaKnown RBP14.16□□□□□ -0.14
C11orf54-214ENST00000540113 CIZ1Q9ULV3 898 aaPredicted RBP14.16□□□□□ -0.14
C11orf54-214ENST00000540113 TMEM94Q12767 1356 aa14.16□□□□□ -0.14
C11orf54-214ENST00000540113 TRIM6-TRIM34B2RNG4 842 aa14.15□□□□□ -0.14
C11orf54-214ENST00000540113 ADAMTS7Q9UKP4 1686 aa14.15□□□□□ -0.14
C11orf54-214ENST00000540113 DCCP43146 1447 aa14.15□□□□□ -0.14
C11orf54-214ENST00000540113 FSD2A1L4K1 749 aa14.15□□□□□ -0.14
C11orf54-214ENST00000540113 ERC2O15083 957 aa14.15□□□□□ -0.14
C11orf54-214ENST00000540113 MAP4K4O95819 1239 aaPredicted RBP14.15□□□□□ -0.14
C11orf54-214ENST00000540113 NUTM1Q86Y26 1132 aa14.15□□□□□ -0.14
C11orf54-214ENST00000540113 UNC5CLQ8IV45 518 aa14.15□□□□□ -0.14
C11orf54-214ENST00000540113 ZGPATQ8N5A5 531 aaKnown RBP14.15□□□□□ -0.14
C11orf54-214ENST00000540113 GBP4Q96PP9 640 aa14.15□□□□□ -0.14
C11orf54-214ENST00000540113 CHPF2Q9P2E5 772 aa14.15□□□□□ -0.14
C11orf54-214ENST00000540113 RNMTO43148 476 aaKnown RBP14.14□□□□□ -0.15
C11orf54-214ENST00000540113 UBTFL1P0CB47 393 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms