RNA–Protein interactions for RNA: ENST00000539736.5

C12orf43-208, Transcript of chromosome 12 open reading frame 43, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C12orf43, Length 1,033 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-208ENST00000539736 CABP4P57796 275 aa27.86■■■□□ 2.05
C12orf43-208ENST00000539736 CDCA7LQ96GN5 454 aa27.86■■■□□ 2.05
C12orf43-208ENST00000539736 SPINK5Q9NQ38 1064 aaPredicted RBP27.86■■■□□ 2.05
C12orf43-208ENST00000539736 CHL1O00533 1208 aa27.85■■■□□ 2.05
C12orf43-208ENST00000539736 TRMT2AQ8IZ69 625 aaKnown RBP27.85■■■□□ 2.05
C12orf43-208ENST00000539736 MYH16Q9H6N6 1097 aa27.85■■■□□ 2.05
C12orf43-208ENST00000539736 NFATC2IPQ8NCF5 419 aa27.84■■■□□ 2.05
C12orf43-208ENST00000539736 DOT1LQ8TEK3 1739 aa27.84■■■□□ 2.05
C12orf43-208ENST00000539736 LAS1LQ9Y4W2 734 aaKnown RBP27.83■■■□□ 2.05
C12orf43-208ENST00000539736 ITGB4P16144 1822 aa27.83■■■□□ 2.05
C12orf43-208ENST00000539736 TMOD3Q9NYL9 352 aa27.81■■■□□ 2.04
C12orf43-208ENST00000539736 BTBD11A6QL63 1104 aa27.8■■■□□ 2.04
C12orf43-208ENST00000539736 PRIM1P49642 420 aaKnown RBP27.8■■■□□ 2.04
C12orf43-208ENST00000539736 DUSP27Q5VZP5 1158 aa27.8■■■□□ 2.04
C12orf43-208ENST00000539736 FAM196AQ6ZSG2 479 aa27.8■■■□□ 2.04
C12orf43-208ENST00000539736 MBIPQ9NS73 344 aa27.8■■■□□ 2.04
C12orf43-208ENST00000539736 TSPYL4Q9UJ04 414 aa27.8■■■□□ 2.04
C12orf43-208ENST00000539736 FAM182BQ5T319 152 aa27.79■■■□□ 2.04
C12orf43-208ENST00000539736 FANCIQ9NVI1 1328 aa27.78■■■□□ 2.04
C12orf43-208ENST00000539736 PIGBQ92521 554 aa27.78■■■□□ 2.04
C12orf43-208ENST00000539736 ACSBG1Q96GR2 724 aa27.78■■■□□ 2.04
C12orf43-208ENST00000539736 MIS18AQ9NYP9 233 aa27.78■■■□□ 2.04
C12orf43-208ENST00000539736 KDM3BQ7LBC6 1761 aa27.78■■■□□ 2.04
C12orf43-208ENST00000539736 KAT6BQ8WYB5 2073 aa27.77■■■□□ 2.04
C12orf43-208ENST00000539736 SBF2Q86WG5 1849 aa27.76■■■□□ 2.04
C12orf43-208ENST00000539736 NHSQ6T4R5 1651 aa27.76■■■□□ 2.03
C12orf43-208ENST00000539736 TSR2Q969E8 191 aaKnown RBP27.76■■■□□ 2.03
C12orf43-208ENST00000539736 SYTL4Q96C24 671 aaPredicted RBP27.75■■■□□ 2.03
C12orf43-208ENST00000539736 PAPPAQ13219 1627 aa27.74■■■□□ 2.03
C12orf43-208ENST00000539736 KCNQ2O43526 872 aa27.73■■■□□ 2.03
C12orf43-208ENST00000539736 ZNF790Q6PG37 636 aa27.73■■■□□ 2.03
C12orf43-208ENST00000539736 SLC39A6Q13433 755 aa27.71■■■□□ 2.03
C12orf43-208ENST00000539736 KCNQ3O43525 872 aa27.7■■■□□ 2.02
C12orf43-208ENST00000539736 TTC5Q8N0Z6 440 aa27.7■■■□□ 2.02
C12orf43-208ENST00000539736 BCL11BQ9C0K0 894 aaPredicted RBP27.7■■■□□ 2.02
C12orf43-208ENST00000539736 ATG3Q9NT62 314 aa27.7■■■□□ 2.02
C12orf43-208ENST00000539736 EIF4A1P60842 406 aaKnown RBP27.69■■■□□ 2.02
C12orf43-208ENST00000539736 EXOSC9Q06265 439 aaKnown RBP27.68■■■□□ 2.02
C12orf43-208ENST00000539736 ASAP1Q9ULH1 1129 aa27.68■■■□□ 2.02
C12orf43-208ENST00000539736 UBR2Q8IWV8 1755 aa27.68■■■□□ 2.02
C12orf43-208ENST00000539736 HEG1Q9ULI3 1381 aa27.66■■■□□ 2.02
C12orf43-208ENST00000539736 SMARCC1Q92922 1105 aaPredicted RBP27.66■■■□□ 2.02
C12orf43-208ENST00000539736 BTAF1O14981 1849 aa27.65■■■□□ 2.02
C12orf43-208ENST00000539736 PTF1AQ7RTS3 328 aa27.65■■■□□ 2.02
C12orf43-208ENST00000539736 FMNL2Q96PY5 1086 aa27.65■■■□□ 2.02
C12orf43-208ENST00000539736 KCPQ6ZWJ8 1503 aa27.65■■■□□ 2.02
C12orf43-208ENST00000539736 SOS1Q07889 1333 aaPredicted RBP27.65■■■□□ 2.02
C12orf43-208ENST00000539736 CT47B1P0C2W7 299 aaPredicted RBP27.64■■■□□ 2.02
C12orf43-208ENST00000539736 C8orf58Q8NAV2 365 aa27.64■■■□□ 2.02
C12orf43-208ENST00000539736 ZNF496Q96IT1 587 aaPredicted RBP27.64■■■□□ 2.02
C12orf43-208ENST00000539736 TRIM37O94972 964 aa27.63■■■□□ 2.01
C12orf43-208ENST00000539736 CENPBP07199 599 aaPredicted RBP27.61■■■□□ 2.01
C12orf43-208ENST00000539736 HOXB7P09629 217 aa27.61■■■□□ 2.01
C12orf43-208ENST00000539736 KRT24Q2M2I5 525 aa27.61■■■□□ 2.01
C12orf43-208ENST00000539736 TWISTNBQ3B726 338 aaPredicted RBP27.61■■■□□ 2.01
C12orf43-208ENST00000539736 TSPYL6Q8N831 410 aa27.61■■■□□ 2.01
C12orf43-208ENST00000539736 VAMP4O75379 141 aa27.6■■■□□ 2.01
C12orf43-208ENST00000539736 GIGYF1O75420 1035 aaPredicted RBP27.6■■■□□ 2.01
C12orf43-208ENST00000539736 VSIG10Q8N0Z9 540 aa27.6■■■□□ 2.01
C12orf43-208ENST00000539736 PALLDQ8WX93 1383 aa27.6■■■□□ 2.01
C12orf43-208ENST00000539736 PTCD1O75127 700 aaKnown RBP27.58■■■□□ 2.01
C12orf43-208ENST00000539736 SNRPA1P09661 255 aaKnown RBP27.58■■■□□ 2.01
C12orf43-208ENST00000539736 ZNF428Q96B54 188 aa27.58■■■□□ 2.01
C12orf43-208ENST00000539736 ELL2O00472 640 aaPredicted RBP27.57■■■□□ 2
C12orf43-208ENST00000539736 RBM42Q9BTD8 480 aaKnown RBP27.56■■■□□ 2
C12orf43-208ENST00000539736 CHMP4AQ9BY43 222 aa27.56■■■□□ 2
C12orf43-208ENST00000539736 EP400Q96L91 3159 aa27.56■■■□□ 2
C12orf43-208ENST00000539736 ZNF831Q5JPB2 1677 aa27.56■■■□□ 2
C12orf43-208ENST00000539736 LOC102724428A0A0B4J2F2 783 aa27.54■■■□□ 2
C12orf43-208ENST00000539736 SIK1P57059 783 aa27.54■■■□□ 2
C12orf43-208ENST00000539736 TEX13AQ9BXU3 409 aaPredicted RBP27.54■■■□□ 2
C12orf43-208ENST00000539736 LY75O60449 1722 aa27.53■■■□□ 2
C12orf43-208ENST00000539736 TNS1Q9HBL0 1735 aaKnown RBP27.53■■■□□ 2
C12orf43-208ENST00000539736 C5P01031 1676 aa27.53■■■□□ 2
C12orf43-208ENST00000539736 SLC4A9Q96Q91 983 aa27.53■■■□□ 2
C12orf43-208ENST00000539736 CICQ96RK0 1608 aaPredicted RBP27.52■■■□□ 2
C12orf43-208ENST00000539736 PRAMEF22A3QJZ6 481 aa27.51■■□□□ 1.99
C12orf43-208ENST00000539736 PLSCR1O15162 318 aa27.51■■□□□ 1.99
C12orf43-208ENST00000539736 RCAN3Q9UKA8 241 aa27.51■■□□□ 1.99
C12orf43-208ENST00000539736 LAMB4A4D0S4 1761 aa27.5■■□□□ 1.99
C12orf43-208ENST00000539736 APBA3O96018 575 aa27.5■■□□□ 1.99
C12orf43-208ENST00000539736 ALDH1L2Q3SY69 923 aa27.5■■□□□ 1.99
C12orf43-208ENST00000539736 CCDC30Q5VVM6 783 aa27.5■■□□□ 1.99
C12orf43-208ENST00000539736 ATP6V1AP38606 617 aa27.49■■□□□ 1.99
C12orf43-208ENST00000539736 RARSP54136 660 aaKnown RBP27.49■■□□□ 1.99
C12orf43-208ENST00000539736 HDGFL1Q5TGJ6 251 aa27.49■■□□□ 1.99
C12orf43-208ENST00000539736 USP16Q9Y5T5 823 aa27.49■■□□□ 1.99
C12orf43-208ENST00000539736 TJP1Q07157 1748 aa27.48■■□□□ 1.99
C12orf43-208ENST00000539736 DNAJC10Q8IXB1 793 aa27.48■■□□□ 1.99
C12orf43-208ENST00000539736 EIF2S2P20042 333 aaKnown RBP27.47■■□□□ 1.99
C12orf43-208ENST00000539736 RGPD3A6NKT7 1758 aaPredicted RBP27.46■■□□□ 1.99
C12orf43-208ENST00000539736 RGPD4Q7Z3J3 1758 aa27.46■■□□□ 1.99
C12orf43-208ENST00000539736 STARD3NLO95772 234 aa27.46■■□□□ 1.99
C12orf43-208ENST00000539736 SLC27A3Q5K4L6 730 aa27.46■■□□□ 1.99
C12orf43-208ENST00000539736 CCDC125Q86Z20 511 aa27.46■■□□□ 1.99
C12orf43-208ENST00000539736 SSH1Q8WYL5 1049 aa27.46■■□□□ 1.99
C12orf43-208ENST00000539736 ITPK1Q13572 414 aa27.45■■□□□ 1.98
C12orf43-208ENST00000539736 CCNL1Q9UK58 526 aaPredicted RBP27.45■■□□□ 1.98
C12orf43-208ENST00000539736 ERBB4Q15303 1308 aa27.44■■□□□ 1.98
C12orf43-208ENST00000539736 CYP19A1P11511 503 aaPredicted RBP27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms