RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 MARF1Q9Y4F3 1742 aaKnown RBP14.61□□□□□ -0.07
NEK6-212ENST00000539416 IGSF3O75054 1194 aa14.6□□□□□ -0.07
NEK6-212ENST00000539416 LRSAM1Q6UWE0 723 aa14.6□□□□□ -0.07
NEK6-212ENST00000539416 TBC1D9Q6ZT07 1266 aa14.6□□□□□ -0.07
NEK6-212ENST00000539416 TMEM51Q9NW97 253 aa14.6□□□□□ -0.07
NEK6-212ENST00000539416 KIF16BQ96L93 1317 aa14.6□□□□□ -0.07
NEK6-212ENST00000539416 SPDYE4A6NLX3 237 aa14.6□□□□□ -0.07
NEK6-212ENST00000539416 KIAA2012Q0VF49 1180 aa14.6□□□□□ -0.07
NEK6-212ENST00000539416 BRINP3Q76B58 766 aa14.6□□□□□ -0.07
NEK6-212ENST00000539416 SBNO1A3KN83 1393 aa14.6□□□□□ -0.07
NEK6-212ENST00000539416 LETM1O95202 739 aaPredicted RBP14.59□□□□□ -0.07
NEK6-212ENST00000539416 CHD1LQ86WJ1 897 aa14.59□□□□□ -0.07
NEK6-212ENST00000539416 TSR2Q969E8 191 aaKnown RBP14.59□□□□□ -0.07
NEK6-212ENST00000539416 CFAP53Q96M91 514 aa14.59□□□□□ -0.07
NEK6-212ENST00000539416 SMC4Q9NTJ3 1288 aa14.59□□□□□ -0.07
NEK6-212ENST00000539416 DDX19BQ9UMR2 479 aa14.59□□□□□ -0.07
NEK6-212ENST00000539416 IQSEC2Q5JU85 1478 aa14.59□□□□□ -0.07
NEK6-212ENST00000539416 NPHP3Q7Z494 1330 aa14.59□□□□□ -0.07
NEK6-212ENST00000539416 BMP2KLQ5H9B9 411 aa14.59□□□□□ -0.07
NEK6-212ENST00000539416 POLKQ9UBT6 870 aa14.59□□□□□ -0.07
NEK6-212ENST00000539416 MAP2P11137 1827 aaKnown RBP14.58□□□□□ -0.07
NEK6-212ENST00000539416 PNPLA6Q8IY17 1366 aa14.58□□□□□ -0.08
NEK6-212ENST00000539416 PTMAP06454 111 aaKnown RBP14.58□□□□□ -0.08
NEK6-212ENST00000539416 ABTB2Q8N961 1025 aa14.58□□□□□ -0.08
NEK6-212ENST00000539416 NAP1L2Q9ULW6 460 aaPredicted RBP14.58□□□□□ -0.08
NEK6-212ENST00000539416 PXDNQ92626 1479 aa14.58□□□□□ -0.08
NEK6-212ENST00000539416 NUCB2P80303 420 aa14.58□□□□□ -0.08
NEK6-212ENST00000539416 TMEM57Q8N5G2 664 aa14.58□□□□□ -0.08
NEK6-212ENST00000539416 ZNF830Q96NB3 372 aaPredicted RBP14.58□□□□□ -0.08
NEK6-212ENST00000539416 CHMP4BQ9H444 224 aaKnown RBP14.58□□□□□ -0.08
NEK6-212ENST00000539416 ZBTB40Q9NUA8 1239 aa14.58□□□□□ -0.08
NEK6-212ENST00000539416 ALS2Q96Q42 1657 aa14.57□□□□□ -0.08
NEK6-212ENST00000539416 NLRP6P59044 892 aa14.57□□□□□ -0.08
NEK6-212ENST00000539416 C17orf53Q8N3J3 647 aaPredicted RBP14.57□□□□□ -0.08
NEK6-212ENST00000539416 SHPRHQ149N8 1683 aa14.57□□□□□ -0.08
NEK6-212ENST00000539416 COL3A1P02461 1466 aaPredicted RBP14.57□□□□□ -0.08
NEK6-212ENST00000539416 SSH1Q8WYL5 1049 aa14.57□□□□□ -0.08
NEK6-212ENST00000539416 GTF2F1P35269 517 aaKnown RBP eCLIP14.56□□□□□ -0.081e-7■■■□□ 15.5
NEK6-212ENST00000539416 EXOSC9Q06265 439 aaKnown RBP14.56□□□□□ -0.08
NEK6-212ENST00000539416 ATF7IPQ6VMQ6 1270 aa14.56□□□□□ -0.08
NEK6-212ENST00000539416 NOB1Q9ULX3 412 aaKnown RBP14.56□□□□□ -0.08
NEK6-212ENST00000539416 ZDHHC9Q9Y397 364 aa14.56□□□□□ -0.08
NEK6-212ENST00000539416 PRIMPOLQ96LW4 560 aa14.55□□□□□ -0.08
NEK6-212ENST00000539416 NHSL1Q5SYE7 1610 aa14.55□□□□□ -0.08
NEK6-212ENST00000539416 CDK12Q9NYV4 1490 aaPredicted RBP14.55□□□□□ -0.08
NEK6-212ENST00000539416 ZGPATQ8N5A5 531 aaKnown RBP14.55□□□□□ -0.08
NEK6-212ENST00000539416 BCL2L12Q9HB09 334 aa14.55□□□□□ -0.08
NEK6-212ENST00000539416 SLIT3O75094 1523 aa14.54□□□□□ -0.08
NEK6-212ENST00000539416 HMGN5P82970 282 aaKnown RBP14.54□□□□□ -0.08
NEK6-212ENST00000539416 ANKRD45Q5TZF3 282 aa14.54□□□□□ -0.08
NEK6-212ENST00000539416 ZBTB22O15209 634 aa14.54□□□□□ -0.08
NEK6-212ENST00000539416 FBLN1P23142 703 aa14.54□□□□□ -0.08
NEK6-212ENST00000539416 NOLC1Q14978 699 aaKnown RBP eCLIP14.54□□□□□ -0.08
NEK6-212ENST00000539416 SOS2Q07890 1332 aaPredicted RBP14.54□□□□□ -0.08
NEK6-212ENST00000539416 VGLL3A8MV65 326 aa14.53□□□□□ -0.08
NEK6-212ENST00000539416 CCDC27Q2M243 656 aa14.53□□□□□ -0.08
NEK6-212ENST00000539416 KIF3AQ9Y496 699 aa14.53□□□□□ -0.08
NEK6-212ENST00000539416 EMILIN1Q9Y6C2 1016 aa14.53□□□□□ -0.08
NEK6-212ENST00000539416 TNS3Q68CZ2 1445 aa14.53□□□□□ -0.08
NEK6-212ENST00000539416 FOXD4L5Q5VV16 416 aaPredicted RBP14.52□□□□□ -0.08
NEK6-212ENST00000539416 KCNH5Q8NCM2 988 aa14.52□□□□□ -0.08
NEK6-212ENST00000539416 FOXD4L4Q8WXT5 416 aaPredicted RBP14.52□□□□□ -0.08
NEK6-212ENST00000539416 PIBF1Q8WXW3 757 aa14.52□□□□□ -0.08
NEK6-212ENST00000539416 DDX17Q92841 729 aaKnown RBP14.52□□□□□ -0.08
NEK6-212ENST00000539416 SPATA31A3Q5VYP0 1347 aa14.52□□□□□ -0.08
NEK6-212ENST00000539416 KIF24Q5T7B8 1368 aa14.52□□□□□ -0.08
NEK6-212ENST00000539416 U2AF2P26368 475 aaKnown RBP eCLIP14.52□□□□□ -0.09
NEK6-212ENST00000539416 NUTM2GQ5VZR2 741 aa14.52□□□□□ -0.09
NEK6-212ENST00000539416 NFAT5O94916 1531 aa14.51□□□□□ -0.09
NEK6-212ENST00000539416 RRS1Q15050 365 aaKnown RBP14.51□□□□□ -0.09
NEK6-212ENST00000539416 PEAK1Q9H792 1746 aa14.51□□□□□ -0.09
NEK6-212ENST00000539416 DIAPH1O60610 1272 aaKnown RBP14.51□□□□□ -0.09
NEK6-212ENST00000539416 PDCL2Q8N4E4 241 aa14.51□□□□□ -0.09
NEK6-212ENST00000539416 TTC12Q9H892 705 aaPredicted RBP14.51□□□□□ -0.09
NEK6-212ENST00000539416 ARHGEF10O15013 1369 aa14.5□□□□□ -0.09
NEK6-212ENST00000539416 RABEP1Q15276 862 aa14.5□□□□□ -0.09
NEK6-212ENST00000539416 CGNQ9P2M7 1197 aaKnown RBP14.5□□□□□ -0.09
NEK6-212ENST00000539416 MAP3K19Q56UN5 1328 aa14.5□□□□□ -0.09
NEK6-212ENST00000539416 MED1Q15648 1581 aaPredicted RBP14.5□□□□□ -0.09
NEK6-212ENST00000539416 ROBO1Q9Y6N7 1651 aa14.5□□□□□ -0.09
NEK6-212ENST00000539416 AHDC1Q5TGY3 1603 aaPredicted RBP14.49□□□□□ -0.09
NEK6-212ENST00000539416 PDIA4P13667 645 aaKnown RBP14.49□□□□□ -0.09
NEK6-212ENST00000539416 TSPY26PQ9H489 355 aa14.49□□□□□ -0.09
NEK6-212ENST00000539416 C1orf115Q9H7X2 142 aa14.49□□□□□ -0.09
NEK6-212ENST00000539416 PHRF1Q9P1Y6 1649 aaKnown RBP14.49□□□□□ -0.09
NEK6-212ENST00000539416 TOM1O60784 492 aa14.48□□□□□ -0.09
NEK6-212ENST00000539416 IL13P35225 146 aa14.48□□□□□ -0.09
NEK6-212ENST00000539416 CRYBG1Q9Y4K1 1723 aa14.48□□□□□ -0.09
NEK6-212ENST00000539416 CDC45O75419 566 aa14.48□□□□□ -0.09
NEK6-212ENST00000539416 RTL1A6NKG5 1358 aa14.48□□□□□ -0.09
NEK6-212ENST00000539416 GCP02774 474 aa14.47□□□□□ -0.09
NEK6-212ENST00000539416 CWC22Q9HCG8 908 aaKnown RBP14.47□□□□□ -0.09
NEK6-212ENST00000539416 FLT4P35916 1363 aa14.47□□□□□ -0.09
NEK6-212ENST00000539416 CT47B1P0C2W7 299 aaPredicted RBP14.47□□□□□ -0.09
NEK6-212ENST00000539416 GSPT1P15170 499 aaKnown RBP14.47□□□□□ -0.09
NEK6-212ENST00000539416 FKBP5Q13451 457 aaPredicted RBP14.47□□□□□ -0.09
NEK6-212ENST00000539416 LMOD2Q6P5Q4 547 aa14.47□□□□□ -0.09
NEK6-212ENST00000539416 IPO4Q8TEX9 1081 aaKnown RBP14.46□□□□□ -0.09
NEK6-212ENST00000539416 LTN1O94822 1766 aa14.46□□□□□ -0.09
NEK6-212ENST00000539416 SOX12O15370 315 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms