RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 MCM10Q7L590 875 aa13.28□□□□□ -0.28
CLPB-210ENST00000539148 CFAP44Q96MT7 982 aa13.28□□□□□ -0.28
CLPB-210ENST00000539148 SLC52A2Q9HAB3 445 aa13.28□□□□□ -0.28
CLPB-210ENST00000539148 RGS12O14924 1447 aa13.28□□□□□ -0.28
CLPB-210ENST00000539148 TTC5Q8N0Z6 440 aa13.27□□□□□ -0.29
CLPB-210ENST00000539148 MARCH10Q8NA82 808 aaPredicted RBP13.27□□□□□ -0.29
CLPB-210ENST00000539148 IL17REQ8NFR9 667 aa13.27□□□□□ -0.29
CLPB-210ENST00000539148 MRC1P22897 1456 aa13.26□□□□□ -0.29
CLPB-210ENST00000539148 ERICH6BQ5W0A0 696 aa13.26□□□□□ -0.29
CLPB-210ENST00000539148 NHSQ6T4R5 1651 aa13.26□□□□□ -0.29
CLPB-210ENST00000539148 SMARCC1Q92922 1105 aaPredicted RBP13.26□□□□□ -0.29
CLPB-210ENST00000539148 SYTL4Q96C24 671 aaPredicted RBP13.26□□□□□ -0.29
CLPB-210ENST00000539148 KDM6AO15550 1401 aaPredicted RBP13.25□□□□□ -0.29
CLPB-210ENST00000539148 SOS1Q07889 1333 aaPredicted RBP13.25□□□□□ -0.29
CLPB-210ENST00000539148 ZNF521Q96K83 1311 aa13.25□□□□□ -0.29
CLPB-210ENST00000539148 BTBD11A6QL63 1104 aa13.25□□□□□ -0.29
CLPB-210ENST00000539148 NFATC2IPQ8NCF5 419 aa13.25□□□□□ -0.29
CLPB-210ENST00000539148 LGR6Q9HBX8 967 aa13.25□□□□□ -0.29
CLPB-210ENST00000539148 TSPYL4Q9UJ04 414 aa13.25□□□□□ -0.29
CLPB-210ENST00000539148 LAS1LQ9Y4W2 734 aaKnown RBP13.25□□□□□ -0.29
CLPB-210ENST00000539148 DCTN1Q14203 1278 aa13.24□□□□□ -0.29
CLPB-210ENST00000539148 TOGARAM1Q9Y4F4 1720 aa13.24□□□□□ -0.29
CLPB-210ENST00000539148 CACNA1FO60840 1977 aa13.23□□□□□ -0.29
CLPB-210ENST00000539148 KDM3BQ7LBC6 1761 aa13.23□□□□□ -0.29
CLPB-210ENST00000539148 CHL1O00533 1208 aa13.23□□□□□ -0.29
CLPB-210ENST00000539148 CT47B1P0C2W7 299 aaPredicted RBP13.23□□□□□ -0.29
CLPB-210ENST00000539148 PRIM1P49642 420 aaKnown RBP13.22□□□□□ -0.29
CLPB-210ENST00000539148 SLFN5Q08AF3 891 aa13.22□□□□□ -0.29
CLPB-210ENST00000539148 SF3B2Q13435 895 aaKnown RBP13.22□□□□□ -0.29
CLPB-210ENST00000539148 ZNF428Q96B54 188 aa13.22□□□□□ -0.29
CLPB-210ENST00000539148 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
CLPB-210ENST00000539148 EP400Q96L91 3159 aa13.21□□□□□ -0.29
CLPB-210ENST00000539148 BTAF1O14981 1849 aa13.21□□□□□ -0.29
CLPB-210ENST00000539148 ZNF853P0CG23 659 aa13.21□□□□□ -0.29
CLPB-210ENST00000539148 ZNF790Q6PG37 636 aa13.21□□□□□ -0.29
CLPB-210ENST00000539148 CCDC125Q86Z20 511 aa13.21□□□□□ -0.29
CLPB-210ENST00000539148 THUMPD2Q9BTF0 503 aaKnown RBP13.21□□□□□ -0.29
CLPB-210ENST00000539148 TEX13AQ9BXU3 409 aaPredicted RBP13.21□□□□□ -0.29
CLPB-210ENST00000539148 FMNL2Q96PY5 1086 aa13.2□□□□□ -0.3
CLPB-210ENST00000539148 PAPPAQ13219 1627 aa13.2□□□□□ -0.3
CLPB-210ENST00000539148 UBR2Q8IWV8 1755 aa13.2□□□□□ -0.3
CLPB-210ENST00000539148 ZNF831Q5JPB2 1677 aa13.19□□□□□ -0.3
CLPB-210ENST00000539148 SENP3-EIF4A1A0A087X0R7 540 aa13.19□□□□□ -0.3
CLPB-210ENST00000539148 HOXB7P09629 217 aa13.19□□□□□ -0.3
CLPB-210ENST00000539148 PIGBQ92521 554 aa13.19□□□□□ -0.3
CLPB-210ENST00000539148 ACSBG1Q96GR2 724 aa13.19□□□□□ -0.3
CLPB-210ENST00000539148 MBIPQ9NS73 344 aa13.19□□□□□ -0.3
CLPB-210ENST00000539148 FANCIQ9NVI1 1328 aa13.18□□□□□ -0.3
CLPB-210ENST00000539148 VSIG10Q8N0Z9 540 aa13.18□□□□□ -0.3
CLPB-210ENST00000539148 RGPD3A6NKT7 1758 aaPredicted RBP13.17□□□□□ -0.3
CLPB-210ENST00000539148 RGPD4Q7Z3J3 1758 aa13.17□□□□□ -0.3
CLPB-210ENST00000539148 SNRPA1P09661 255 aaKnown RBP13.17□□□□□ -0.3
CLPB-210ENST00000539148 TRMT2AQ8IZ69 625 aaKnown RBP13.17□□□□□ -0.3
CLPB-210ENST00000539148 TRIM37O94972 964 aa13.16□□□□□ -0.3
CLPB-210ENST00000539148 DUSP27Q5VZP5 1158 aa13.16□□□□□ -0.3
CLPB-210ENST00000539148 NPM2Q86SE8 214 aaKnown RBP13.16□□□□□ -0.3
CLPB-210ENST00000539148 LAMB4A4D0S4 1761 aa13.16□□□□□ -0.3
CLPB-210ENST00000539148 LY75O60449 1722 aa13.16□□□□□ -0.3
CLPB-210ENST00000539148 STARD3NLO95772 234 aa13.15□□□□□ -0.3
CLPB-210ENST00000539148 EIF4A1P60842 406 aaKnown RBP13.15□□□□□ -0.3
CLPB-210ENST00000539148 FAM182BQ5T319 152 aa13.15□□□□□ -0.3
CLPB-210ENST00000539148 TSR2Q969E8 191 aaKnown RBP13.15□□□□□ -0.3
CLPB-210ENST00000539148 CDCA7LQ96GN5 454 aa13.15□□□□□ -0.3
CLPB-210ENST00000539148 RBM42Q9BTD8 480 aaKnown RBP13.15□□□□□ -0.3
CLPB-210ENST00000539148 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
CLPB-210ENST00000539148 PALLDQ8WX93 1383 aa13.15□□□□□ -0.3
CLPB-210ENST00000539148 CICQ96RK0 1608 aaPredicted RBP13.14□□□□□ -0.31
CLPB-210ENST00000539148 PLSCR1O15162 318 aa13.14□□□□□ -0.31
CLPB-210ENST00000539148 BAG6P46379 1132 aa13.14□□□□□ -0.31
CLPB-210ENST00000539148 EXOSC9Q06265 439 aaKnown RBP13.14□□□□□ -0.31
CLPB-210ENST00000539148 TWISTNBQ3B726 338 aaPredicted RBP13.14□□□□□ -0.31
CLPB-210ENST00000539148 SLC27A3Q5K4L6 730 aa13.14□□□□□ -0.31
CLPB-210ENST00000539148 CCDC30Q5VVM6 783 aa13.14□□□□□ -0.31
CLPB-210ENST00000539148 STK31Q9BXU1 1019 aa13.14□□□□□ -0.31
CLPB-210ENST00000539148 MIS18AQ9NYP9 233 aa13.14□□□□□ -0.31
CLPB-210ENST00000539148 ASAP1Q9ULH1 1129 aa13.14□□□□□ -0.31
CLPB-210ENST00000539148 HEG1Q9ULI3 1381 aa13.14□□□□□ -0.31
CLPB-210ENST00000539148 TNS1Q9HBL0 1735 aaKnown RBP13.13□□□□□ -0.31
CLPB-210ENST00000539148 KCNQ2O43526 872 aa13.13□□□□□ -0.31
CLPB-210ENST00000539148 PTCD1O75127 700 aaKnown RBP13.13□□□□□ -0.31
CLPB-210ENST00000539148 APBA3O96018 575 aa13.13□□□□□ -0.31
CLPB-210ENST00000539148 SLC39A6Q13433 755 aa13.13□□□□□ -0.31
CLPB-210ENST00000539148 ERBB4Q15303 1308 aa13.13□□□□□ -0.31
CLPB-210ENST00000539148 LOC102724428A0A0B4J2F2 783 aa13.12□□□□□ -0.31
CLPB-210ENST00000539148 GIGYF1O75420 1035 aaPredicted RBP13.12□□□□□ -0.31
CLPB-210ENST00000539148 SIK1P57059 783 aa13.12□□□□□ -0.31
CLPB-210ENST00000539148 ZNF496Q96IT1 587 aaPredicted RBP13.12□□□□□ -0.31
CLPB-210ENST00000539148 SUPT16HQ9Y5B9 1047 aaKnown RBP13.12□□□□□ -0.31
CLPB-210ENST00000539148 ATP6V1AP38606 617 aa13.11□□□□□ -0.31
CLPB-210ENST00000539148 ALDH1L2Q3SY69 923 aa13.11□□□□□ -0.31
CLPB-210ENST00000539148 HDGFL1Q5TGJ6 251 aa13.11□□□□□ -0.31
CLPB-210ENST00000539148 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.11□□□□□ -0.31
CLPB-210ENST00000539148 SPINK5Q9NQ38 1064 aaPredicted RBP13.11□□□□□ -0.31
CLPB-210ENST00000539148 KCPQ6ZWJ8 1503 aa13.11□□□□□ -0.31
CLPB-210ENST00000539148 TAF1LQ8IZX4 1826 aa13.11□□□□□ -0.31
CLPB-210ENST00000539148 DBF4Q9UBU7 674 aaPredicted RBP13.1□□□□□ -0.31
CLPB-210ENST00000539148 CCNL1Q9UK58 526 aaPredicted RBP13.1□□□□□ -0.31
CLPB-210ENST00000539148 ELL2O00472 640 aaPredicted RBP13.09□□□□□ -0.31
CLPB-210ENST00000539148 IPO8O15397 1037 aaKnown RBP13.09□□□□□ -0.31
CLPB-210ENST00000539148 C8orf58Q8NAV2 365 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms