RNA–Protein interactions for RNA: ENST00000539091.5

RAP1B-220, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-220ENST00000539091 SCN11AQ9UI33 1791 aa27.32■■□□□ 1.96
RAP1B-220ENST00000539091 SLC27A3Q5K4L6 730 aa27.32■■□□□ 1.96
RAP1B-220ENST00000539091 TTC5Q8N0Z6 440 aa27.32■■□□□ 1.96
RAP1B-220ENST00000539091 IL17REQ8NFR9 667 aa27.32■■□□□ 1.96
RAP1B-220ENST00000539091 RRP7AQ9Y3A4 280 aaKnown RBP27.32■■□□□ 1.96
RAP1B-220ENST00000539091 MIER1Q8N108 512 aa27.31■■□□□ 1.96
RAP1B-220ENST00000539091 CCNL1Q9UK58 526 aaPredicted RBP27.31■■□□□ 1.96
RAP1B-220ENST00000539091 APAF1O14727 1248 aa27.3■■□□□ 1.96
RAP1B-220ENST00000539091 RBM42Q9BTD8 480 aaKnown RBP27.3■■□□□ 1.96
RAP1B-220ENST00000539091 ASAP1Q9ULH1 1129 aa27.3■■□□□ 1.96
RAP1B-220ENST00000539091 DCTN1Q14203 1278 aa27.29■■□□□ 1.96
RAP1B-220ENST00000539091 RGPD3A6NKT7 1758 aaPredicted RBP27.27■■□□□ 1.96
RAP1B-220ENST00000539091 RGPD4Q7Z3J3 1758 aa27.27■■□□□ 1.96
RAP1B-220ENST00000539091 BTBD11A6QL63 1104 aa27.27■■□□□ 1.96
RAP1B-220ENST00000539091 ATG3Q9NT62 314 aa27.27■■□□□ 1.96
RAP1B-220ENST00000539091 CEMIPQ8WUJ3 1361 aa27.25■■□□□ 1.95
RAP1B-220ENST00000539091 PTCD1O75127 700 aaKnown RBP27.25■■□□□ 1.95
RAP1B-220ENST00000539091 TAF7Q15545 349 aaPredicted RBP27.25■■□□□ 1.95
RAP1B-220ENST00000539091 STK32BQ9NY57 414 aa27.25■■□□□ 1.95
RAP1B-220ENST00000539091 VIRMAQ69YN4 1812 aaKnown RBP27.25■■□□□ 1.95
RAP1B-220ENST00000539091 LOC102724428A0A0B4J2F2 783 aa27.24■■□□□ 1.95
RAP1B-220ENST00000539091 ATP6V1AP38606 617 aa27.24■■□□□ 1.95
RAP1B-220ENST00000539091 SIK1P57059 783 aa27.24■■□□□ 1.95
RAP1B-220ENST00000539091 CALD1Q05682 793 aaKnown RBP27.24■■□□□ 1.95
RAP1B-220ENST00000539091 MRC1P22897 1456 aa27.23■■□□□ 1.95
RAP1B-220ENST00000539091 DLG5Q8TDM6 1919 aa27.23■■□□□ 1.95
RAP1B-220ENST00000539091 SLC39A6Q13433 755 aa27.22■■□□□ 1.95
RAP1B-220ENST00000539091 PROM2Q8N271 834 aa27.22■■□□□ 1.95
RAP1B-220ENST00000539091 ADAMTS7Q9UKP4 1686 aa27.21■■□□□ 1.95
RAP1B-220ENST00000539091 THUMPD2Q9BTF0 503 aaKnown RBP27.2■■□□□ 1.94
RAP1B-220ENST00000539091 KCNQ4P56696 695 aa27.19■■□□□ 1.94
RAP1B-220ENST00000539091 ZNF790Q6PG37 636 aa27.19■■□□□ 1.94
RAP1B-220ENST00000539091 LAS1LQ9Y4W2 734 aaKnown RBP27.19■■□□□ 1.94
RAP1B-220ENST00000539091 RREB1Q92766 1687 aa27.18■■□□□ 1.94
RAP1B-220ENST00000539091 FMNL2Q96PY5 1086 aa27.17■■□□□ 1.94
RAP1B-220ENST00000539091 LRRC4BQ9NT99 713 aa27.17■■□□□ 1.94
RAP1B-220ENST00000539091 LY75O60449 1722 aa27.16■■□□□ 1.94
RAP1B-220ENST00000539091 NGEFQ8N5V2 710 aa27.16■■□□□ 1.94
RAP1B-220ENST00000539091 TSPYL4Q9UJ04 414 aa27.16■■□□□ 1.94
RAP1B-220ENST00000539091 AK7Q96M32 723 aa27.15■■□□□ 1.94
RAP1B-220ENST00000539091 TFCP2L1Q9NZI6 479 aa27.15■■□□□ 1.94
RAP1B-220ENST00000539091 TRIM35Q9UPQ4 493 aa27.15■■□□□ 1.94
RAP1B-220ENST00000539091 SALL2Q9Y467 1007 aaPredicted RBP27.15■■□□□ 1.94
RAP1B-220ENST00000539091 SENP3-EIF4A1A0A087X0R7 540 aa27.14■■□□□ 1.94
RAP1B-220ENST00000539091 NUP188Q5SRE5 1749 aa27.13■■□□□ 1.93
RAP1B-220ENST00000539091 R3HDM1Q15032 1099 aaKnown RBP27.13■■□□□ 1.93
RAP1B-220ENST00000539091 SLC15A2Q16348 729 aa27.13■■□□□ 1.93
RAP1B-220ENST00000539091 TEX13AQ9BXU3 409 aaPredicted RBP27.13■■□□□ 1.93
RAP1B-220ENST00000539091 BABAM1Q9NWV8 329 aa27.13■■□□□ 1.93
RAP1B-220ENST00000539091 MIS18AQ9NYP9 233 aa27.13■■□□□ 1.93
RAP1B-220ENST00000539091 VSIG10Q8N0Z9 540 aa27.12■■□□□ 1.93
RAP1B-220ENST00000539091 PSDA5PKW4 1024 aaPredicted RBP27.1■■□□□ 1.93
RAP1B-220ENST00000539091 STARD3NLO95772 234 aa27.1■■□□□ 1.93
RAP1B-220ENST00000539091 CCDC27Q2M243 656 aa27.1■■□□□ 1.93
RAP1B-220ENST00000539091 NCBP3Q53F19 620 aaKnown RBP27.1■■□□□ 1.93
RAP1B-220ENST00000539091 ZNF496Q96IT1 587 aaPredicted RBP27.1■■□□□ 1.93
RAP1B-220ENST00000539091 SIPA1L3O60292 1781 aaPredicted RBP27.09■■□□□ 1.93
RAP1B-220ENST00000539091 MSH5O43196 834 aa27.09■■□□□ 1.93
RAP1B-220ENST00000539091 GNAI1P63096 354 aa27.09■■□□□ 1.93
RAP1B-220ENST00000539091 ITPK1Q13572 414 aa27.08■■□□□ 1.93
RAP1B-220ENST00000539091 NPM2Q86SE8 214 aaKnown RBP27.08■■□□□ 1.93
RAP1B-220ENST00000539091 ANO8Q9HCE9 1232 aaPredicted RBP27.08■■□□□ 1.93
RAP1B-220ENST00000539091 KCNQ3O43525 872 aa27.07■■□□□ 1.92
RAP1B-220ENST00000539091 SNRPA1P09661 255 aaKnown RBP27.07■■□□□ 1.92
RAP1B-220ENST00000539091 LINC00116Q8NCU8 138 aa27.07■■□□□ 1.92
RAP1B-220ENST00000539091 C5P01031 1676 aa27.07■■□□□ 1.92
RAP1B-220ENST00000539091 HEG1Q9ULI3 1381 aa27.07■■□□□ 1.92
RAP1B-220ENST00000539091 PAPPAQ13219 1627 aa27.06■■□□□ 1.92
RAP1B-220ENST00000539091 WWC1Q8IX03 1113 aa27.06■■□□□ 1.92
RAP1B-220ENST00000539091 DNAJC10Q8IXB1 793 aa27.06■■□□□ 1.92
RAP1B-220ENST00000539091 FLAD1Q8NFF5 587 aa27.06■■□□□ 1.92
RAP1B-220ENST00000539091 CFAP44Q96MT7 982 aa27.06■■□□□ 1.92
RAP1B-220ENST00000539091 GNPATO15228 680 aa27.05■■□□□ 1.92
RAP1B-220ENST00000539091 ZNF827Q17R98 1081 aa27.05■■□□□ 1.92
RAP1B-220ENST00000539091 AKT1S1Q96B36 256 aa27.05■■□□□ 1.92
RAP1B-220ENST00000539091 SLC4A9Q96Q91 983 aa27.05■■□□□ 1.92
RAP1B-220ENST00000539091 IFT57Q9NWB7 429 aa27.05■■□□□ 1.92
RAP1B-220ENST00000539091 RC3H1Q5TC82 1133 aaKnown RBP27.04■■□□□ 1.92
RAP1B-220ENST00000539091 RTCBQ9Y3I0 505 aaKnown RBP27.04■■□□□ 1.92
RAP1B-220ENST00000539091 CHL1O00533 1208 aa27.03■■□□□ 1.92
RAP1B-220ENST00000539091 CRKLP46109 303 aaKnown RBP27.03■■□□□ 1.92
RAP1B-220ENST00000539091 KCPQ6ZWJ8 1503 aa27.03■■□□□ 1.92
RAP1B-220ENST00000539091 ZNF831Q5JPB2 1677 aa27.02■■□□□ 1.92
RAP1B-220ENST00000539091 CNTNAP4Q9C0A0 1308 aa27.02■■□□□ 1.92
RAP1B-220ENST00000539091 CCDC87Q9NVE4 849 aa27.02■■□□□ 1.92
RAP1B-220ENST00000539091 PHF14O94880 888 aa27.01■■□□□ 1.91
RAP1B-220ENST00000539091 EIF4A1P60842 406 aaKnown RBP27.01■■□□□ 1.91
RAP1B-220ENST00000539091 WDR63Q8IWG1 891 aa27.01■■□□□ 1.91
RAP1B-220ENST00000539091 TAF1LQ8IZX4 1826 aa27.01■■□□□ 1.91
RAP1B-220ENST00000539091 C4BP0C0L5 1744 aa27.01■■□□□ 1.91
RAP1B-220ENST00000539091 UBR2Q8IWV8 1755 aa27■■□□□ 1.91
RAP1B-220ENST00000539091 IL16Q14005 1332 aa26.99■■□□□ 1.91
RAP1B-220ENST00000539091 CYP19A1P11511 503 aaPredicted RBP26.98■■□□□ 1.91
RAP1B-220ENST00000539091 SSFA2P28290 1259 aa26.98■■□□□ 1.91
RAP1B-220ENST00000539091 TRAPPC3LQ5T215 181 aa26.98■■□□□ 1.91
RAP1B-220ENST00000539091 RPS6KA4O75676 772 aa26.97■■□□□ 1.91
RAP1B-220ENST00000539091 MBIPQ9NS73 344 aa26.97■■□□□ 1.91
RAP1B-220ENST00000539091 KDM3BQ7LBC6 1761 aa26.97■■□□□ 1.91
RAP1B-220ENST00000539091 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.96■■□□□ 1.91
RAP1B-220ENST00000539091 CANXP27824 592 aaKnown RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms