RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 CT47B1P0C2W7 299 aaPredicted RBP13.08□□□□□ -0.32
LDHA-216ENST00000538451 TEFQ10587 303 aa13.08□□□□□ -0.32
LDHA-216ENST00000538451 CFAP44Q96MT7 982 aa13.08□□□□□ -0.32
LDHA-216ENST00000538451 CHMP4AQ9BY43 222 aa13.08□□□□□ -0.32
LDHA-216ENST00000538451 BABAM1Q9NWV8 329 aa13.08□□□□□ -0.32
LDHA-216ENST00000538451 LAS1LQ9Y4W2 734 aaKnown RBP13.08□□□□□ -0.32
LDHA-216ENST00000538451 PARP4Q9UKK3 1724 aaKnown RBP13.07□□□□□ -0.32
LDHA-216ENST00000538451 OVOS2A0A0G2JMS6 1433 aa13.07□□□□□ -0.32
LDHA-216ENST00000538451 EXOC5O00471 708 aa13.07□□□□□ -0.32
LDHA-216ENST00000538451 BARGINQ6ZT62 677 aa13.07□□□□□ -0.32
LDHA-216ENST00000538451 CDCA7LQ96GN5 454 aa13.07□□□□□ -0.32
LDHA-216ENST00000538451 RBM42Q9BTD8 480 aaKnown RBP13.07□□□□□ -0.32
LDHA-216ENST00000538451 NEFLP07196 543 aa13.06□□□□□ -0.32
LDHA-216ENST00000538451 SF3B2Q13435 895 aaKnown RBP13.06□□□□□ -0.32
LDHA-216ENST00000538451 DUSP27Q5VZP5 1158 aa13.06□□□□□ -0.32
LDHA-216ENST00000538451 TRMT2AQ8IZ69 625 aaKnown RBP13.06□□□□□ -0.32
LDHA-216ENST00000538451 DCAF5Q96JK2 942 aa13.06□□□□□ -0.32
LDHA-216ENST00000538451 BRWD3Q6RI45 1802 aa13.05□□□□□ -0.32
LDHA-216ENST00000538451 TAF7Q15545 349 aaPredicted RBP13.05□□□□□ -0.32
LDHA-216ENST00000538451 MCM10Q7L590 875 aa13.05□□□□□ -0.32
LDHA-216ENST00000538451 PHKG2P15735 406 aa13.04□□□□□ -0.32
LDHA-216ENST00000538451 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.04□□□□□ -0.32
LDHA-216ENST00000538451 ZNF428Q96B54 188 aa13.04□□□□□ -0.32
LDHA-216ENST00000538451 THSD7AQ9UPZ6 1657 aa13.04□□□□□ -0.32
LDHA-216ENST00000538451 DLG5Q8TDM6 1919 aa13.03□□□□□ -0.32
LDHA-216ENST00000538451 MEGF6O75095 1541 aa13.03□□□□□ -0.32
LDHA-216ENST00000538451 DCTN1Q14203 1278 aa13.03□□□□□ -0.32
LDHA-216ENST00000538451 DDB1Q16531 1140 aa13.03□□□□□ -0.32
LDHA-216ENST00000538451 TSPYL4Q9UJ04 414 aa13.03□□□□□ -0.32
LDHA-216ENST00000538451 RCAN3Q9UKA8 241 aa13.03□□□□□ -0.32
LDHA-216ENST00000538451 RNMTO43148 476 aaKnown RBP13.02□□□□□ -0.33
LDHA-216ENST00000538451 MPRIPQ6WCQ1 1025 aa13.02□□□□□ -0.33
LDHA-216ENST00000538451 DDX54Q8TDD1 881 aaKnown RBP13.02□□□□□ -0.33
LDHA-216ENST00000538451 FANCIQ9NVI1 1328 aa13.02□□□□□ -0.33
LDHA-216ENST00000538451 CHL1O00533 1208 aa13.01□□□□□ -0.33
LDHA-216ENST00000538451 ZNF853P0CG23 659 aa13.01□□□□□ -0.33
LDHA-216ENST00000538451 IL17REQ8NFR9 667 aa13.01□□□□□ -0.33
LDHA-216ENST00000538451 THUMPD2Q9BTF0 503 aaKnown RBP13.01□□□□□ -0.33
LDHA-216ENST00000538451 SOS1Q07889 1333 aaPredicted RBP13.01□□□□□ -0.33
LDHA-216ENST00000538451 CEMIPQ8WUJ3 1361 aa13.01□□□□□ -0.33
LDHA-216ENST00000538451 PKD1L3Q7Z443 1732 aa13.01□□□□□ -0.33
LDHA-216ENST00000538451 ERVV-2B6SEH9 535 aa13□□□□□ -0.33
LDHA-216ENST00000538451 CABP4P57796 275 aa13□□□□□ -0.33
LDHA-216ENST00000538451 NKX1-1Q15270 411 aaPredicted RBP13□□□□□ -0.33
LDHA-216ENST00000538451 FAM196AQ6ZSG2 479 aa13□□□□□ -0.33
LDHA-216ENST00000538451 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
LDHA-216ENST00000538451 MBIPQ9NS73 344 aa13□□□□□ -0.33
LDHA-216ENST00000538451 BTBD11A6QL63 1104 aa12.99□□□□□ -0.33
LDHA-216ENST00000538451 CYP27B1O15528 508 aa12.99□□□□□ -0.33
LDHA-216ENST00000538451 TSR2Q969E8 191 aaKnown RBP12.99□□□□□ -0.33
LDHA-216ENST00000538451 DISP2A7MBM2 1401 aa12.98□□□□□ -0.33
LDHA-216ENST00000538451 BAG6P46379 1132 aa12.98□□□□□ -0.33
LDHA-216ENST00000538451 EXOSC9Q06265 439 aaKnown RBP12.98□□□□□ -0.33
LDHA-216ENST00000538451 TTC5Q8N0Z6 440 aa12.98□□□□□ -0.33
LDHA-216ENST00000538451 SLC52A2Q9HAB3 445 aa12.98□□□□□ -0.33
LDHA-216ENST00000538451 LGR6Q9HBX8 967 aa12.98□□□□□ -0.33
LDHA-216ENST00000538451 SUPT16HQ9Y5B9 1047 aaKnown RBP12.98□□□□□ -0.33
LDHA-216ENST00000538451 EP400Q96L91 3159 aa12.98□□□□□ -0.33
LDHA-216ENST00000538451 TNS2Q63HR2 1409 aa12.97□□□□□ -0.33
LDHA-216ENST00000538451 FAM182BQ5T319 152 aa12.97□□□□□ -0.33
LDHA-216ENST00000538451 MS4A1P11836 297 aa12.96□□□□□ -0.33
LDHA-216ENST00000538451 CANXP27824 592 aaKnown RBP12.96□□□□□ -0.33
LDHA-216ENST00000538451 TWISTNBQ3B726 338 aaPredicted RBP12.96□□□□□ -0.33
LDHA-216ENST00000538451 ALDH1L2Q3SY69 923 aa12.96□□□□□ -0.33
LDHA-216ENST00000538451 HOXB7P09629 217 aa12.95□□□□□ -0.34
LDHA-216ENST00000538451 DEFB132Q7Z7B7 95 aa12.95□□□□□ -0.34
LDHA-216ENST00000538451 NFATC2IPQ8NCF5 419 aa12.95□□□□□ -0.34
LDHA-216ENST00000538451 TMOD3Q9NYL9 352 aa12.95□□□□□ -0.34
LDHA-216ENST00000538451 TAOK2Q9UL54 1235 aa12.95□□□□□ -0.34
LDHA-216ENST00000538451 LRRC37A3O60309 1634 aa12.95□□□□□ -0.34
LDHA-216ENST00000538451 IPO8O15397 1037 aaKnown RBP12.94□□□□□ -0.34
LDHA-216ENST00000538451 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
LDHA-216ENST00000538451 WNK3Q9BYP7 1800 aa12.94□□□□□ -0.34
LDHA-216ENST00000538451 TRIM37O94972 964 aa12.93□□□□□ -0.34
LDHA-216ENST00000538451 CCDC30Q5VVM6 783 aa12.93□□□□□ -0.34
LDHA-216ENST00000538451 STK31Q9BXU1 1019 aa12.93□□□□□ -0.34
LDHA-216ENST00000538451 SMC4Q9NTJ3 1288 aa12.93□□□□□ -0.34
LDHA-216ENST00000538451 SCN11AQ9UI33 1791 aa12.93□□□□□ -0.34
LDHA-216ENST00000538451 ADAMTS7Q9UKP4 1686 aa12.93□□□□□ -0.34
LDHA-216ENST00000538451 KIF16BQ96L93 1317 aa12.93□□□□□ -0.34
LDHA-216ENST00000538451 KDM6AO15550 1401 aaPredicted RBP12.92□□□□□ -0.34
LDHA-216ENST00000538451 RARSP54136 660 aaKnown RBP12.92□□□□□ -0.34
LDHA-216ENST00000538451 ZNF790Q6PG37 636 aa12.92□□□□□ -0.34
LDHA-216ENST00000538451 MIS18AQ9NYP9 233 aa12.92□□□□□ -0.34
LDHA-216ENST00000538451 MRC1P22897 1456 aa12.92□□□□□ -0.34
LDHA-216ENST00000538451 VAMP4O75379 141 aa12.91□□□□□ -0.34
LDHA-216ENST00000538451 RRP1P56182 461 aaKnown RBP12.91□□□□□ -0.34
LDHA-216ENST00000538451 ERICH6BQ5W0A0 696 aa12.91□□□□□ -0.34
LDHA-216ENST00000538451 KLHL34Q8N239 644 aa12.91□□□□□ -0.34
LDHA-216ENST00000538451 FMNL2Q96PY5 1086 aa12.91□□□□□ -0.34
LDHA-216ENST00000538451 ELL2O00472 640 aaPredicted RBP12.9□□□□□ -0.34
LDHA-216ENST00000538451 APBA3O96018 575 aa12.9□□□□□ -0.34
LDHA-216ENST00000538451 HMGB2P26583 209 aaKnown RBP12.9□□□□□ -0.34
LDHA-216ENST00000538451 EIF4A1P60842 406 aaKnown RBP12.9□□□□□ -0.34
LDHA-216ENST00000538451 EN1Q05925 392 aaPredicted RBP12.9□□□□□ -0.34
LDHA-216ENST00000538451 SYTL4Q96C24 671 aaPredicted RBP12.9□□□□□ -0.34
LDHA-216ENST00000538451 ECM2O94769 699 aaPredicted RBP12.89□□□□□ -0.35
LDHA-216ENST00000538451 C8orf58Q8NAV2 365 aa12.89□□□□□ -0.35
LDHA-216ENST00000538451 SPOCK2Q92563 424 aa12.89□□□□□ -0.35
LDHA-216ENST00000538451 TEX13AQ9BXU3 409 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms