RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 IGSF3O75054 1194 aa4.63□□□□□ -1.67
PTPN22-211ENST00000538253 STARD3NLO95772 234 aa4.63□□□□□ -1.67
PTPN22-211ENST00000538253 CT47B1P0C2W7 299 aaPredicted RBP4.63□□□□□ -1.67
PTPN22-211ENST00000538253 MS4A1P11836 297 aa4.63□□□□□ -1.67
PTPN22-211ENST00000538253 DIEXFQ68CQ4 756 aaKnown RBP4.63□□□□□ -1.67
PTPN22-211ENST00000538253 SLC16A10Q8TF71 515 aa4.63□□□□□ -1.67
PTPN22-211ENST00000538253 EYA1Q99502 592 aa4.63□□□□□ -1.67
PTPN22-211ENST00000538253 HOXB7P09629 217 aa4.62□□□□□ -1.67
PTPN22-211ENST00000538253 HSP90AB2PQ58FF8 381 aa4.62□□□□□ -1.67
PTPN22-211ENST00000538253 VSIG10Q8N0Z9 540 aa4.62□□□□□ -1.67
PTPN22-211ENST00000538253 MYOM1P52179 1685 aa4.62□□□□□ -1.67
PTPN22-211ENST00000538253 CCDC27Q2M243 656 aa4.62□□□□□ -1.67
PTPN22-211ENST00000538253 GLIPR1L2Q4G1C9 344 aa4.62□□□□□ -1.67
PTPN22-211ENST00000538253 USP35Q9P2H5 1018 aa4.62□□□□□ -1.67
PTPN22-211ENST00000538253 DISP2A7MBM2 1401 aa4.62□□□□□ -1.67
PTPN22-211ENST00000538253 LMO7Q8WWI1 1683 aa4.62□□□□□ -1.67
PTPN22-211ENST00000538253 CAMTA1Q9Y6Y1 1673 aa4.62□□□□□ -1.67
PTPN22-211ENST00000538253 WDR63Q8IWG1 891 aa4.61□□□□□ -1.67
PTPN22-211ENST00000538253 DDX54Q8TDD1 881 aaKnown RBP4.61□□□□□ -1.67
PTPN22-211ENST00000538253 ABCA3Q99758 1704 aa4.61□□□□□ -1.67
PTPN22-211ENST00000538253 PARP4Q9UKK3 1724 aaKnown RBP4.61□□□□□ -1.67
PTPN22-211ENST00000538253 PLCH1Q4KWH8 1693 aa4.61□□□□□ -1.67
PTPN22-211ENST00000538253 PHKG2P15735 406 aa4.61□□□□□ -1.67
PTPN22-211ENST00000538253 PRKAR2BP31323 418 aa4.61□□□□□ -1.67
PTPN22-211ENST00000538253 NBPF6Q5VWK0 638 aa4.61□□□□□ -1.67
PTPN22-211ENST00000538253 POTEAQ6S8J7 498 aa4.61□□□□□ -1.67
PTPN22-211ENST00000538253 NBPF4Q96M43 638 aa4.61□□□□□ -1.67
PTPN22-211ENST00000538253 FMNL2Q96PY5 1086 aa4.61□□□□□ -1.67
PTPN22-211ENST00000538253 ZNF652Q9Y2D9 606 aa4.61□□□□□ -1.67
PTPN22-211ENST00000538253 RGPD8O14715 1765 aaPredicted RBP4.61□□□□□ -1.67
PTPN22-211ENST00000538253 TAF7Q15545 349 aaPredicted RBP4.6□□□□□ -1.67
PTPN22-211ENST00000538253 APBA3O96018 575 aa4.6□□□□□ -1.67
PTPN22-211ENST00000538253 POLD1P28340 1107 aa4.6□□□□□ -1.67
PTPN22-211ENST00000538253 HSP90AB3PQ58FF7 597 aa4.6□□□□□ -1.67
PTPN22-211ENST00000538253 RC3H1Q5TC82 1133 aaKnown RBP4.6□□□□□ -1.67
PTPN22-211ENST00000538253 CFAP44Q96MT7 982 aa4.6□□□□□ -1.67
PTPN22-211ENST00000538253 DDX58O95786 925 aaKnown RBP4.6□□□□□ -1.67
PTPN22-211ENST00000538253 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.6□□□□□ -1.67
PTPN22-211ENST00000538253 RGS12O14924 1447 aa4.6□□□□□ -1.67
PTPN22-211ENST00000538253 SYTL4Q96C24 671 aaPredicted RBP4.59□□□□□ -1.67
PTPN22-211ENST00000538253 AK7Q96M32 723 aa4.59□□□□□ -1.67
PTPN22-211ENST00000538253 IFT57Q9NWB7 429 aa4.59□□□□□ -1.67
PTPN22-211ENST00000538253 BCCIPQ9P287 314 aaKnown RBP eCLIP4.59□□□□□ -1.67
PTPN22-211ENST00000538253 NRAPQ86VF7 1730 aa4.59□□□□□ -1.67
PTPN22-211ENST00000538253 CRYBG1Q9Y4K1 1723 aa4.59□□□□□ -1.67
PTPN22-211ENST00000538253 RNMTO43148 476 aaKnown RBP4.59□□□□□ -1.67
PTPN22-211ENST00000538253 PLCB2Q00722 1185 aa4.59□□□□□ -1.67
PTPN22-211ENST00000538253 STK31Q9BXU1 1019 aa4.59□□□□□ -1.67
PTPN22-211ENST00000538253 SNRPA1P09661 255 aaKnown RBP4.59□□□□□ -1.68
PTPN22-211ENST00000538253 RIPK4P57078 832 aa4.59□□□□□ -1.68
PTPN22-211ENST00000538253 GOLGA2Q08379 1002 aa4.59□□□□□ -1.68
PTPN22-211ENST00000538253 TMX4Q9H1E5 349 aaPredicted RBP4.59□□□□□ -1.68
PTPN22-211ENST00000538253 SLC52A2Q9HAB3 445 aa4.59□□□□□ -1.68
PTPN22-211ENST00000538253 NAP1L2Q9ULW6 460 aaPredicted RBP4.59□□□□□ -1.68
PTPN22-211ENST00000538253 AXIN2Q9Y2T1 843 aa4.59□□□□□ -1.68
PTPN22-211ENST00000538253 E9PSI1 815 aa4.58□□□□□ -1.68
PTPN22-211ENST00000538253 THSD7AQ9UPZ6 1657 aa4.58□□□□□ -1.68
PTPN22-211ENST00000538253 CCNL1Q9UK58 526 aaPredicted RBP4.58□□□□□ -1.68
PTPN22-211ENST00000538253 RNF123Q5XPI4 1314 aa4.58□□□□□ -1.68
PTPN22-211ENST00000538253 BTBD11A6QL63 1104 aa4.58□□□□□ -1.68
PTPN22-211ENST00000538253 IPO8O15397 1037 aaKnown RBP4.58□□□□□ -1.68
PTPN22-211ENST00000538253 SSFA2P28290 1259 aa4.58□□□□□ -1.68
PTPN22-211ENST00000538253 TMPOP42166 694 aaKnown RBP4.58□□□□□ -1.68
PTPN22-211ENST00000538253 RTCBQ9Y3I0 505 aaKnown RBP4.58□□□□□ -1.68
PTPN22-211ENST00000538253 COL18A1P39060 1754 aa4.57□□□□□ -1.68
PTPN22-211ENST00000538253 HMOX1P09601 288 aa4.57□□□□□ -1.68
PTPN22-211ENST00000538253 KIF6Q6ZMV9 814 aa4.57□□□□□ -1.68
PTPN22-211ENST00000538253 TSPYL4Q9UJ04 414 aa4.57□□□□□ -1.68
PTPN22-211ENST00000538253 CNTNAP4Q9C0A0 1308 aa4.57□□□□□ -1.68
PTPN22-211ENST00000538253 RGPD1P0DJD0 1748 aa4.57□□□□□ -1.68
PTPN22-211ENST00000538253 GLI3P10071 1580 aa4.57□□□□□ -1.68
PTPN22-211ENST00000538253 LTN1O94822 1766 aa4.57□□□□□ -1.68
PTPN22-211ENST00000538253 CNGB1Q14028 1251 aaPredicted RBP4.57□□□□□ -1.68
PTPN22-211ENST00000538253 GRIPAP1Q4V328 841 aa4.57□□□□□ -1.68
PTPN22-211ENST00000538253 CCDC30Q5VVM6 783 aa4.57□□□□□ -1.68
PTPN22-211ENST00000538253 NLGN1Q8N2Q7 840 aa4.57□□□□□ -1.68
PTPN22-211ENST00000538253 MARCH10Q8NA82 808 aaPredicted RBP4.57□□□□□ -1.68
PTPN22-211ENST00000538253 UPF1Q92900 1129 aaKnown RBP eCLIP4.57□□□□□ -1.68
PTPN22-211ENST00000538253 PALLDQ8WX93 1383 aa4.57□□□□□ -1.68
PTPN22-211ENST00000538253 ZBTB22O15209 634 aa4.57□□□□□ -1.68
PTPN22-211ENST00000538253 PRIM1P49642 420 aaKnown RBP4.57□□□□□ -1.68
PTPN22-211ENST00000538253 RGS17Q9UGC6 210 aaPredicted RBP4.57□□□□□ -1.68
PTPN22-211ENST00000538253 COL3A1P02461 1466 aaPredicted RBP4.56□□□□□ -1.68
PTPN22-211ENST00000538253 ZPR1O75312 459 aa4.56□□□□□ -1.68
PTPN22-211ENST00000538253 TRIM37O94972 964 aa4.56□□□□□ -1.68
PTPN22-211ENST00000538253 MPRIPQ6WCQ1 1025 aa4.56□□□□□ -1.68
PTPN22-211ENST00000538253 RBM42Q9BTD8 480 aaKnown RBP4.56□□□□□ -1.68
PTPN22-211ENST00000538253 HYPKQ9NX55 129 aa4.56□□□□□ -1.68
PTPN22-211ENST00000538253 KAT6BQ8WYB5 2073 aa4.56□□□□□ -1.68
PTPN22-211ENST00000538253 NPM3O75607 178 aaKnown RBP4.56□□□□□ -1.68
PTPN22-211ENST00000538253 NEXNQ0ZGT2 675 aa4.56□□□□□ -1.68
PTPN22-211ENST00000538253 TXNRD1Q16881 649 aa4.56□□□□□ -1.68
PTPN22-211ENST00000538253 MTHFSDQ2M296 383 aaKnown RBP4.56□□□□□ -1.68
PTPN22-211ENST00000538253 WWC1Q8IX03 1113 aa4.56□□□□□ -1.68
PTPN22-211ENST00000538253 ZFP91Q96JP5 570 aaPredicted RBP4.56□□□□□ -1.68
PTPN22-211ENST00000538253 NYXQ9GZU5 481 aa4.56□□□□□ -1.68
PTPN22-211ENST00000538253 LOC102724428A0A0B4J2F2 783 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 ATP6V1AP38606 617 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 SIK1P57059 783 aa4.55□□□□□ -1.68
PTPN22-211ENST00000538253 TRAPPC3LQ5T215 181 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms