RNA–Protein interactions for RNA: ENST00000538145.5

RHBDL3-204, Transcript of rhomboid like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RHBDL3, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-204ENST00000538145 RUNDC1Q96C34 613 aa29.06■■■□□ 2.24
RHBDL3-204ENST00000538145 SLC52A2Q9HAB3 445 aa29.06■■■□□ 2.24
RHBDL3-204ENST00000538145 SIPA1L3O60292 1781 aaPredicted RBP29.05■■■□□ 2.24
RHBDL3-204ENST00000538145 SMARCC1Q92922 1105 aaPredicted RBP29.05■■■□□ 2.24
RHBDL3-204ENST00000538145 NFATC2IPQ8NCF5 419 aa29.04■■■□□ 2.24
RHBDL3-204ENST00000538145 PALLDQ8WX93 1383 aa29.03■■■□□ 2.24
RHBDL3-204ENST00000538145 SLC27A3Q5K4L6 730 aa29.02■■■□□ 2.24
RHBDL3-204ENST00000538145 ATG3Q9NT62 314 aa29.02■■■□□ 2.24
RHBDL3-204ENST00000538145 PAPPAQ13219 1627 aa29.01■■■□□ 2.24
RHBDL3-204ENST00000538145 NBPF14Q5TI25 921 aa29.01■■■□□ 2.23
RHBDL3-204ENST00000538145 CCDC146Q8IYE0 955 aa29.01■■■□□ 2.23
RHBDL3-204ENST00000538145 ASAP1Q9ULH1 1129 aa29.01■■■□□ 2.23
RHBDL3-204ENST00000538145 RTF1Q92541 710 aaKnown RBP29■■■□□ 2.23
RHBDL3-204ENST00000538145 TMPOP42166 694 aaKnown RBP28.99■■■□□ 2.23
RHBDL3-204ENST00000538145 ZNF831Q5JPB2 1677 aa28.99■■■□□ 2.23
RHBDL3-204ENST00000538145 CCER2I3L3R5 266 aa28.98■■■□□ 2.23
RHBDL3-204ENST00000538145 LRRC4BQ9NT99 713 aa28.98■■■□□ 2.23
RHBDL3-204ENST00000538145 TEFQ10587 303 aa28.96■■■□□ 2.23
RHBDL3-204ENST00000538145 TAF1LQ8IZX4 1826 aa28.96■■■□□ 2.23
RHBDL3-204ENST00000538145 MCM10Q7L590 875 aa28.95■■■□□ 2.23
RHBDL3-204ENST00000538145 RIPK4P57078 832 aa28.94■■■□□ 2.22
RHBDL3-204ENST00000538145 CCNL1Q9UK58 526 aaPredicted RBP28.94■■■□□ 2.22
RHBDL3-204ENST00000538145 UBR2Q8IWV8 1755 aa28.94■■■□□ 2.22
RHBDL3-204ENST00000538145 DCTN1Q14203 1278 aa28.94■■■□□ 2.22
RHBDL3-204ENST00000538145 ANO8Q9HCE9 1232 aaPredicted RBP28.94■■■□□ 2.22
RHBDL3-204ENST00000538145 LOC102724428A0A0B4J2F2 783 aa28.93■■■□□ 2.22
RHBDL3-204ENST00000538145 HMGB2P26583 209 aaKnown RBP28.93■■■□□ 2.22
RHBDL3-204ENST00000538145 SIK1P57059 783 aa28.93■■■□□ 2.22
RHBDL3-204ENST00000538145 LMOD3Q0VAK6 560 aa28.93■■■□□ 2.22
RHBDL3-204ENST00000538145 C5P01031 1676 aa28.93■■■□□ 2.22
RHBDL3-204ENST00000538145 CICQ96RK0 1608 aaPredicted RBP28.92■■■□□ 2.22
RHBDL3-204ENST00000538145 KCPQ6ZWJ8 1503 aa28.9■■■□□ 2.22
RHBDL3-204ENST00000538145 APAF1O14727 1248 aa28.9■■■□□ 2.22
RHBDL3-204ENST00000538145 CASZ1Q86V15 1759 aa28.89■■■□□ 2.22
RHBDL3-204ENST00000538145 RRP7AQ9Y3A4 280 aaKnown RBP28.89■■■□□ 2.21
RHBDL3-204ENST00000538145 KCNQ4P56696 695 aa28.88■■■□□ 2.21
RHBDL3-204ENST00000538145 SLC4A9Q96Q91 983 aa28.88■■■□□ 2.21
RHBDL3-204ENST00000538145 TRIM35Q9UPQ4 493 aa28.88■■■□□ 2.21
RHBDL3-204ENST00000538145 SLC39A6Q13433 755 aa28.87■■■□□ 2.21
RHBDL3-204ENST00000538145 COL5A3P25940 1745 aaPredicted RBP28.86■■■□□ 2.21
RHBDL3-204ENST00000538145 TAF7Q15545 349 aaPredicted RBP28.86■■■□□ 2.21
RHBDL3-204ENST00000538145 NCBP3Q53F19 620 aaKnown RBP28.86■■■□□ 2.21
RHBDL3-204ENST00000538145 ZNF790Q6PG37 636 aa28.86■■■□□ 2.21
RHBDL3-204ENST00000538145 MIER1Q8N108 512 aa28.86■■■□□ 2.21
RHBDL3-204ENST00000538145 AKT1S1Q96B36 256 aa28.86■■■□□ 2.21
RHBDL3-204ENST00000538145 BTBD11A6QL63 1104 aa28.85■■■□□ 2.21
RHBDL3-204ENST00000538145 ATP6V1AP38606 617 aa28.85■■■□□ 2.21
RHBDL3-204ENST00000538145 NEUROD2Q15784 382 aa28.85■■■□□ 2.21
RHBDL3-204ENST00000538145 SLC15A2Q16348 729 aa28.85■■■□□ 2.21
RHBDL3-204ENST00000538145 FAM9BQ8IZU0 186 aa28.85■■■□□ 2.21
RHBDL3-204ENST00000538145 THUMPD2Q9BTF0 503 aaKnown RBP28.85■■■□□ 2.21
RHBDL3-204ENST00000538145 QSER1Q2KHR3 1735 aa28.85■■■□□ 2.21
RHBDL3-204ENST00000538145 KDM3BQ7LBC6 1761 aa28.84■■■□□ 2.21
RHBDL3-204ENST00000538145 C4BP0C0L5 1744 aa28.84■■■□□ 2.21
RHBDL3-204ENST00000538145 TJP1Q07157 1748 aa28.84■■■□□ 2.21
RHBDL3-204ENST00000538145 ITPK1Q13572 414 aa28.84■■■□□ 2.21
RHBDL3-204ENST00000538145 RBM42Q9BTD8 480 aaKnown RBP28.84■■■□□ 2.21
RHBDL3-204ENST00000538145 STK32BQ9NY57 414 aa28.84■■■□□ 2.21
RHBDL3-204ENST00000538145 PTCD1O75127 700 aaKnown RBP28.83■■■□□ 2.21
RHBDL3-204ENST00000538145 ZNF827Q17R98 1081 aa28.82■■■□□ 2.2
RHBDL3-204ENST00000538145 TTC5Q8N0Z6 440 aa28.82■■■□□ 2.2
RHBDL3-204ENST00000538145 VSIG10Q8N0Z9 540 aa28.82■■■□□ 2.2
RHBDL3-204ENST00000538145 TUBGCP6Q96RT7 1819 aa28.81■■■□□ 2.2
RHBDL3-204ENST00000538145 CCDC27Q2M243 656 aa28.8■■■□□ 2.2
RHBDL3-204ENST00000538145 LINC00116Q8NCU8 138 aa28.8■■■□□ 2.2
RHBDL3-204ENST00000538145 BABAM1Q9NWV8 329 aa28.8■■■□□ 2.2
RHBDL3-204ENST00000538145 ZNF496Q96IT1 587 aaPredicted RBP28.78■■■□□ 2.2
RHBDL3-204ENST00000538145 HEG1Q9ULI3 1381 aa28.78■■■□□ 2.2
RHBDL3-204ENST00000538145 KCNQ3O43525 872 aa28.77■■■□□ 2.2
RHBDL3-204ENST00000538145 UBR3Q6ZT12 1888 aa28.77■■■□□ 2.2
RHBDL3-204ENST00000538145 MYH14Q7Z406 1995 aaKnown RBP28.77■■■□□ 2.2
RHBDL3-204ENST00000538145 FMNL2Q96PY5 1086 aa28.76■■■□□ 2.19
RHBDL3-204ENST00000538145 RC3H1Q5TC82 1133 aaKnown RBP28.75■■■□□ 2.19
RHBDL3-204ENST00000538145 PDGFDQ9GZP0 370 aaPredicted RBP28.75■■■□□ 2.19
RHBDL3-204ENST00000538145 SPON1Q9HCB6 807 aa28.75■■■□□ 2.19
RHBDL3-204ENST00000538145 CNTNAP4Q9C0A0 1308 aa28.75■■■□□ 2.19
RHBDL3-204ENST00000538145 MIS18AQ9NYP9 233 aa28.74■■■□□ 2.19
RHBDL3-204ENST00000538145 NGEFQ8N5V2 710 aa28.73■■■□□ 2.19
RHBDL3-204ENST00000538145 DNAJC10Q8IXB1 793 aa28.72■■■□□ 2.19
RHBDL3-204ENST00000538145 CHL1O00533 1208 aa28.71■■■□□ 2.19
RHBDL3-204ENST00000538145 CALD1Q05682 793 aaKnown RBP28.71■■■□□ 2.19
RHBDL3-204ENST00000538145 AK7Q96M32 723 aa28.71■■■□□ 2.19
RHBDL3-204ENST00000538145 TEX13AQ9BXU3 409 aaPredicted RBP28.71■■■□□ 2.19
RHBDL3-204ENST00000538145 TFCP2L1Q9NZI6 479 aa28.71■■■□□ 2.19
RHBDL3-204ENST00000538145 PNPLA7Q6ZV29 1317 aa28.7■■■□□ 2.19
RHBDL3-204ENST00000538145 WWC1Q8IX03 1113 aa28.7■■■□□ 2.19
RHBDL3-204ENST00000538145 TSPYL4Q9UJ04 414 aa28.7■■■□□ 2.19
RHBDL3-204ENST00000538145 CYP19A1P11511 503 aaPredicted RBP28.69■■■□□ 2.18
RHBDL3-204ENST00000538145 CFAP44Q96MT7 982 aa28.69■■■□□ 2.18
RHBDL3-204ENST00000538145 ZNF853P0CG23 659 aa28.69■■■□□ 2.18
RHBDL3-204ENST00000538145 EIF4A1P60842 406 aaKnown RBP28.69■■■□□ 2.18
RHBDL3-204ENST00000538145 SNRPA1P09661 255 aaKnown RBP28.68■■■□□ 2.18
RHBDL3-204ENST00000538145 CRKLP46109 303 aaKnown RBP28.68■■■□□ 2.18
RHBDL3-204ENST00000538145 FLAD1Q8NFF5 587 aa28.68■■■□□ 2.18
RHBDL3-204ENST00000538145 SSFA2P28290 1259 aa28.67■■■□□ 2.18
RHBDL3-204ENST00000538145 INTS5Q6P9B9 1019 aaKnown RBP28.67■■■□□ 2.18
RHBDL3-204ENST00000538145 IFT57Q9NWB7 429 aa28.67■■■□□ 2.18
RHBDL3-204ENST00000538145 LAMB4A4D0S4 1761 aa28.66■■■□□ 2.18
RHBDL3-204ENST00000538145 RPS6KA4O75676 772 aa28.66■■■□□ 2.18
RHBDL3-204ENST00000538145 STARD3NLO95772 234 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms