RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-215ENST00000537551 LRP5O75197 1615 aa30.97■■■□□ 2.55
CHFR-215ENST00000537551 SLC52A2Q9HAB3 445 aa30.96■■■□□ 2.55
CHFR-215ENST00000537551 GNAT3A8MTJ3 354 aa30.95■■■□□ 2.55
CHFR-215ENST00000537551 SCN11AQ9UI33 1791 aa30.94■■■□□ 2.54
CHFR-215ENST00000537551 MAP3K5Q99683 1374 aa30.93■■■□□ 2.54
CHFR-215ENST00000537551 CASZ1Q86V15 1759 aa30.93■■■□□ 2.54
CHFR-215ENST00000537551 NEFMP07197 916 aa30.93■■■□□ 2.54
CHFR-215ENST00000537551 ATF5Q9Y2D1 282 aaPredicted RBP30.93■■■□□ 2.54
CHFR-215ENST00000537551 SRCAPQ6ZRS2 3230 aa30.92■■■□□ 2.54
CHFR-215ENST00000537551 PNPLA7Q6ZV29 1317 aa30.92■■■□□ 2.54
CHFR-215ENST00000537551 AK7Q96M32 723 aa30.91■■■□□ 2.54
CHFR-215ENST00000537551 PRKRIP1Q9H875 184 aaPredicted RBP30.91■■■□□ 2.54
CHFR-215ENST00000537551 C5P01031 1676 aa30.9■■■□□ 2.54
CHFR-215ENST00000537551 MSH5O43196 834 aa30.9■■■□□ 2.54
CHFR-215ENST00000537551 PTCD1O75127 700 aaKnown RBP30.9■■■□□ 2.54
CHFR-215ENST00000537551 ITPK1Q13572 414 aa30.9■■■□□ 2.54
CHFR-215ENST00000537551 MTFR1LQ9H019 292 aa30.9■■■□□ 2.54
CHFR-215ENST00000537551 PPP1R1BQ9UD71 204 aaPredicted RBP30.9■■■□□ 2.54
CHFR-215ENST00000537551 LINC00116Q8NCU8 138 aa30.89■■■□□ 2.54
CHFR-215ENST00000537551 PNNQ9H307 717 aaKnown RBP30.88■■■□□ 2.53
CHFR-215ENST00000537551 TAF1LQ8IZX4 1826 aa30.87■■■□□ 2.53
CHFR-215ENST00000537551 TEFQ10587 303 aa30.87■■■□□ 2.53
CHFR-215ENST00000537551 IL17REQ8NFR9 667 aa30.87■■■□□ 2.53
CHFR-215ENST00000537551 SLC16A10Q8TF71 515 aa30.86■■■□□ 2.53
CHFR-215ENST00000537551 RTF1Q92541 710 aaKnown RBP30.86■■■□□ 2.53
CHFR-215ENST00000537551 SLC4A9Q96Q91 983 aa30.86■■■□□ 2.53
CHFR-215ENST00000537551 SLC39A6Q13433 755 aa30.85■■■□□ 2.53
CHFR-215ENST00000537551 C4BP0C0L5 1744 aa30.84■■■□□ 2.53
CHFR-215ENST00000537551 COL23A1Q86Y22 540 aaPredicted RBP30.84■■■□□ 2.53
CHFR-215ENST00000537551 FLAD1Q8NFF5 587 aa30.84■■■□□ 2.53
CHFR-215ENST00000537551 MRC1P22897 1456 aa30.83■■■□□ 2.53
CHFR-215ENST00000537551 VIRMAQ69YN4 1812 aaKnown RBP30.83■■■□□ 2.53
CHFR-215ENST00000537551 QSER1Q2KHR3 1735 aa30.83■■■□□ 2.53
CHFR-215ENST00000537551 TUBGCP6Q96RT7 1819 aa30.82■■■□□ 2.52
CHFR-215ENST00000537551 ADAMTS7Q9UKP4 1686 aa30.81■■■□□ 2.52
CHFR-215ENST00000537551 MAPK8IP3Q9UPT6 1336 aa30.81■■■□□ 2.52
CHFR-215ENST00000537551 PHF14O94880 888 aa30.81■■■□□ 2.52
CHFR-215ENST00000537551 GNPATO15228 680 aa30.8■■■□□ 2.52
CHFR-215ENST00000537551 PTGER2P43116 358 aa30.8■■■□□ 2.52
CHFR-215ENST00000537551 PLEKHF1Q96S99 279 aa30.8■■■□□ 2.52
CHFR-215ENST00000537551 TTC5Q8N0Z6 440 aa30.79■■■□□ 2.52
CHFR-215ENST00000537551 WDR43Q15061 677 aaKnown RBP eCLIP30.78■■■□□ 2.52
CHFR-215ENST00000537551 SMIM5Q71RC9 77 aa30.78■■■□□ 2.52
CHFR-215ENST00000537551 MCM10Q7L590 875 aa30.78■■■□□ 2.52
CHFR-215ENST00000537551 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.77■■■□□ 2.52
CHFR-215ENST00000537551 HTATSF1O43719 755 aaKnown RBP30.77■■■□□ 2.52
CHFR-215ENST00000537551 CEMIPQ8WUJ3 1361 aa30.77■■■□□ 2.52
CHFR-215ENST00000537551 SSFA2P28290 1259 aa30.76■■■□□ 2.51
CHFR-215ENST00000537551 RC3H1Q5TC82 1133 aaKnown RBP30.76■■■□□ 2.51
CHFR-215ENST00000537551 AMIGO3Q86WK7 504 aa30.76■■■□□ 2.51
CHFR-215ENST00000537551 POLD1P28340 1107 aa30.75■■■□□ 2.51
CHFR-215ENST00000537551 DCTN1Q14203 1278 aa30.75■■■□□ 2.51
CHFR-215ENST00000537551 RTCBQ9Y3I0 505 aaKnown RBP30.75■■■□□ 2.51
CHFR-215ENST00000537551 ZNF831Q5JPB2 1677 aa30.74■■■□□ 2.51
CHFR-215ENST00000537551 NFE2L2Q16236 605 aa30.74■■■□□ 2.51
CHFR-215ENST00000537551 SGIP1Q9BQI5 828 aa30.74■■■□□ 2.51
CHFR-215ENST00000537551 BTBD11A6QL63 1104 aa30.73■■■□□ 2.51
CHFR-215ENST00000537551 DNAJC10Q8IXB1 793 aa30.73■■■□□ 2.51
CHFR-215ENST00000537551 CNTNAP4Q9C0A0 1308 aa30.73■■■□□ 2.51
CHFR-215ENST00000537551 ZNF790Q6PG37 636 aa30.72■■■□□ 2.51
CHFR-215ENST00000537551 CRKLP46109 303 aaKnown RBP30.71■■■□□ 2.51
CHFR-215ENST00000537551 TRAPPC3LQ5T215 181 aa30.71■■■□□ 2.51
CHFR-215ENST00000537551 MSL1Q68DK7 614 aa30.71■■■□□ 2.51
CHFR-215ENST00000537551 ARXQ96QS3 562 aa30.71■■■□□ 2.51
CHFR-215ENST00000537551 UBR3Q6ZT12 1888 aa30.71■■■□□ 2.51
CHFR-215ENST00000537551 ANP32CO43423 234 aa30.7■■■□□ 2.51
CHFR-215ENST00000537551 RPS6KA4O75676 772 aa30.69■■■□□ 2.5
CHFR-215ENST00000537551 VSIG10Q8N0Z9 540 aa30.69■■■□□ 2.5
CHFR-215ENST00000537551 KCPQ6ZWJ8 1503 aa30.68■■■□□ 2.5
CHFR-215ENST00000537551 CCDC146Q8IYE0 955 aa30.68■■■□□ 2.5
CHFR-215ENST00000537551 ADAMTS8Q9UP79 889 aa30.68■■■□□ 2.5
CHFR-215ENST00000537551 COL5A3P25940 1745 aaPredicted RBP30.67■■■□□ 2.5
CHFR-215ENST00000537551 ZNF496Q96IT1 587 aaPredicted RBP30.67■■■□□ 2.5
CHFR-215ENST00000537551 FMNL2Q96PY5 1086 aa30.66■■■□□ 2.5
CHFR-215ENST00000537551 SIPA1L3O60292 1781 aaPredicted RBP30.66■■■□□ 2.5
CHFR-215ENST00000537551 TJP1Q07157 1748 aa30.65■■■□□ 2.5
CHFR-215ENST00000537551 KCNQ3O43525 872 aa30.65■■■□□ 2.5
CHFR-215ENST00000537551 ADRA2BP18089 450 aa30.65■■■□□ 2.5
CHFR-215ENST00000537551 RIPK4P57078 832 aa30.65■■■□□ 2.5
CHFR-215ENST00000537551 TAF7Q15545 349 aaPredicted RBP30.65■■■□□ 2.5
CHFR-215ENST00000537551 CYP19A1P11511 503 aaPredicted RBP30.64■■■□□ 2.5
CHFR-215ENST00000537551 ARHGEF1Q92888 912 aaKnown RBP30.64■■■□□ 2.5
CHFR-215ENST00000537551 RUNDC1Q96C34 613 aa30.64■■■□□ 2.5
CHFR-215ENST00000537551 FHDC1Q9C0D6 1143 aaPredicted RBP30.64■■■□□ 2.5
CHFR-215ENST00000537551 CCDC87Q9NVE4 849 aa30.64■■■□□ 2.5
CHFR-215ENST00000537551 RFC4P35249 363 aa30.63■■■□□ 2.49
CHFR-215ENST00000537551 INTS5Q6P9B9 1019 aaKnown RBP30.63■■■□□ 2.49
CHFR-215ENST00000537551 KLHL34Q8N239 644 aa30.63■■■□□ 2.49
CHFR-215ENST00000537551 HEG1Q9ULI3 1381 aa30.63■■■□□ 2.49
CHFR-215ENST00000537551 DLG5Q8TDM6 1919 aa30.63■■■□□ 2.49
CHFR-215ENST00000537551 STARD3NLO95772 234 aa30.62■■■□□ 2.49
CHFR-215ENST00000537551 TMPOP42166 694 aaKnown RBP30.62■■■□□ 2.49
CHFR-215ENST00000537551 TEX13AQ9BXU3 409 aaPredicted RBP30.62■■■□□ 2.49
CHFR-215ENST00000537551 MYH14Q7Z406 1995 aaKnown RBP30.62■■■□□ 2.49
CHFR-215ENST00000537551 NEUROD2Q15784 382 aa30.61■■■□□ 2.49
CHFR-215ENST00000537551 THUMPD2Q9BTF0 503 aaKnown RBP30.61■■■□□ 2.49
CHFR-215ENST00000537551 UBR2Q8IWV8 1755 aa30.61■■■□□ 2.49
CHFR-215ENST00000537551 CICQ96RK0 1608 aaPredicted RBP30.6■■■□□ 2.49
CHFR-215ENST00000537551 SYT17Q9BSW7 474 aa30.6■■■□□ 2.49
CHFR-215ENST00000537551 MIS18AQ9NYP9 233 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms