RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 SEPT12Q8IYM1 358 aa8.72□□□□□ -1.01
IFT88-207ENST00000537103 IFNL2Q8IZJ0 200 aa8.72□□□□□ -1.01
IFT88-207ENST00000537103 KCTD17Q8N5Z5 321 aa8.72□□□□□ -1.01
IFT88-207ENST00000537103 PLEKHF1Q96S99 279 aa8.72□□□□□ -1.01
IFT88-207ENST00000537103 GPBP1L1Q9HC44 474 aaPredicted RBP8.72□□□□□ -1.01
IFT88-207ENST00000537103 ERVV-2B6SEH9 535 aa8.71□□□□□ -1.01
IFT88-207ENST00000537103 WDR43Q15061 677 aaKnown RBP eCLIP8.71□□□□□ -1.01
IFT88-207ENST00000537103 DIEXFQ68CQ4 756 aaKnown RBP8.71□□□□□ -1.01
IFT88-207ENST00000537103 KRT27Q7Z3Y8 459 aa8.71□□□□□ -1.01
IFT88-207ENST00000537103 PNISRQ8TF01 805 aaKnown RBP8.71□□□□□ -1.01
IFT88-207ENST00000537103 QSER1Q2KHR3 1735 aa8.71□□□□□ -1.02
IFT88-207ENST00000537103 DOT1LQ8TEK3 1739 aa8.71□□□□□ -1.02
IFT88-207ENST00000537103 TOGARAM1Q9Y4F4 1720 aa8.71□□□□□ -1.02
IFT88-207ENST00000537103 RREB1Q92766 1687 aa8.71□□□□□ -1.02
IFT88-207ENST00000537103 RUNDC1Q96C34 613 aa8.71□□□□□ -1.02
IFT88-207ENST00000537103 CEMIPQ8WUJ3 1361 aa8.71□□□□□ -1.02
IFT88-207ENST00000537103 MAP3K5Q99683 1374 aa8.71□□□□□ -1.02
IFT88-207ENST00000537103 DCAF5Q96JK2 942 aa8.7□□□□□ -1.02
IFT88-207ENST00000537103 LY75O60449 1722 aa8.7□□□□□ -1.02
IFT88-207ENST00000537103 SOS1Q07889 1333 aaPredicted RBP8.7□□□□□ -1.02
IFT88-207ENST00000537103 SOX12O15370 315 aa8.7□□□□□ -1.02
IFT88-207ENST00000537103 CALD1Q05682 793 aaKnown RBP8.7□□□□□ -1.02
IFT88-207ENST00000537103 SULT6B1Q6IMI4 303 aa8.7□□□□□ -1.02
IFT88-207ENST00000537103 UBR2Q8IWV8 1755 aa8.7□□□□□ -1.02
IFT88-207ENST00000537103 C5P01031 1676 aa8.7□□□□□ -1.02
IFT88-207ENST00000537103 PHKG2P15735 406 aa8.69□□□□□ -1.02
IFT88-207ENST00000537103 TNNT2P45379 298 aaPredicted RBP8.69□□□□□ -1.02
IFT88-207ENST00000537103 PDE3BQ13370 1112 aa8.69□□□□□ -1.02
IFT88-207ENST00000537103 ZNF428Q96B54 188 aa8.69□□□□□ -1.02
IFT88-207ENST00000537103 IL16Q14005 1332 aa8.69□□□□□ -1.02
IFT88-207ENST00000537103 PPM1GO15355 546 aaPredicted RBP8.69□□□□□ -1.02
IFT88-207ENST00000537103 RAD21O60216 631 aa8.69□□□□□ -1.02
IFT88-207ENST00000537103 FAM98CQ17RN3 349 aaKnown RBP8.69□□□□□ -1.02
IFT88-207ENST00000537103 NFE2L2Q16236 605 aa8.68□□□□□ -1.02
IFT88-207ENST00000537103 BCL11BQ9C0K0 894 aaPredicted RBP8.68□□□□□ -1.02
IFT88-207ENST00000537103 KDM3BQ7LBC6 1761 aa8.68□□□□□ -1.02
IFT88-207ENST00000537103 MAPK8IP3Q9UPT6 1336 aa8.68□□□□□ -1.02
IFT88-207ENST00000537103 U2AF1L5P0DN76 240 aaPredicted RBP8.68□□□□□ -1.02
IFT88-207ENST00000537103 U2AF1Q01081 240 aaKnown RBP eCLIP8.68□□□□□ -1.02
IFT88-207ENST00000537103 C1orf141Q5JVX7 400 aa8.68□□□□□ -1.02
IFT88-207ENST00000537103 VIRMAQ69YN4 1812 aaKnown RBP8.68□□□□□ -1.02
IFT88-207ENST00000537103 FBLN1P23142 703 aa8.67□□□□□ -1.02
IFT88-207ENST00000537103 SMARCC1Q92922 1105 aaPredicted RBP8.67□□□□□ -1.02
IFT88-207ENST00000537103 KDM6AO15550 1401 aaPredicted RBP8.67□□□□□ -1.02
IFT88-207ENST00000537103 MKRN3Q13064 507 aaKnown RBP8.67□□□□□ -1.02
IFT88-207ENST00000537103 LTV1Q96GA3 475 aaPredicted RBP8.67□□□□□ -1.02
IFT88-207ENST00000537103 CHMP4AQ9BY43 222 aa8.67□□□□□ -1.02
IFT88-207ENST00000537103 ITGB4P16144 1822 aa8.67□□□□□ -1.02
IFT88-207ENST00000537103 GNAT3A8MTJ3 354 aa8.67□□□□□ -1.02
IFT88-207ENST00000537103 PLSCR1O15162 318 aa8.67□□□□□ -1.02
IFT88-207ENST00000537103 PRKAR2BP31323 418 aa8.67□□□□□ -1.02
IFT88-207ENST00000537103 MARCH10Q8NA82 808 aaPredicted RBP8.67□□□□□ -1.02
IFT88-207ENST00000537103 MRS2Q9HD23 443 aa8.67□□□□□ -1.02
IFT88-207ENST00000537103 U2SURPO15042 1029 aaKnown RBP8.66□□□□□ -1.02
IFT88-207ENST00000537103 BTAF1O14981 1849 aa8.66□□□□□ -1.02
IFT88-207ENST00000537103 CYP27B1O15528 508 aa8.66□□□□□ -1.02
IFT88-207ENST00000537103 ZNF530Q6P9A1 599 aaPredicted RBP8.66□□□□□ -1.02
IFT88-207ENST00000537103 MIER1Q8N108 512 aa8.66□□□□□ -1.02
IFT88-207ENST00000537103 DLG5Q8TDM6 1919 aa8.65□□□□□ -1.02
IFT88-207ENST00000537103 LAMB4A4D0S4 1761 aa8.65□□□□□ -1.02
IFT88-207ENST00000537103 RNMTO43148 476 aaKnown RBP8.65□□□□□ -1.03
IFT88-207ENST00000537103 MTHFSDQ2M296 383 aaKnown RBP8.65□□□□□ -1.03
IFT88-207ENST00000537103 SLC27A3Q5K4L6 730 aa8.65□□□□□ -1.03
IFT88-207ENST00000537103 CAPN15O75808 1086 aa8.64□□□□□ -1.03
IFT88-207ENST00000537103 AEBP1Q8IUX7 1158 aa8.64□□□□□ -1.03
IFT88-207ENST00000537103 WDR63Q8IWG1 891 aa8.64□□□□□ -1.03
IFT88-207ENST00000537103 TMPOP42166 694 aaKnown RBP8.64□□□□□ -1.03
IFT88-207ENST00000537103 CCDC82Q8N4S0 544 aa8.64□□□□□ -1.03
IFT88-207ENST00000537103 ADAMTS8Q9UP79 889 aa8.64□□□□□ -1.03
IFT88-207ENST00000537103 MTMR7Q9Y216 660 aa8.64□□□□□ -1.03
IFT88-207ENST00000537103 COL5A3P25940 1745 aaPredicted RBP8.63□□□□□ -1.03
IFT88-207ENST00000537103 KCPQ6ZWJ8 1503 aa8.63□□□□□ -1.03
IFT88-207ENST00000537103 NUP188Q5SRE5 1749 aa8.63□□□□□ -1.03
IFT88-207ENST00000537103 PLEKHG5O94827 1062 aa8.63□□□□□ -1.03
IFT88-207ENST00000537103 HOXB7P09629 217 aa8.63□□□□□ -1.03
IFT88-207ENST00000537103 USHBP1Q8N6Y0 703 aa8.63□□□□□ -1.03
IFT88-207ENST00000537103 RTF1Q92541 710 aaKnown RBP8.63□□□□□ -1.03
IFT88-207ENST00000537103 SLC52A2Q9HAB3 445 aa8.63□□□□□ -1.03
IFT88-207ENST00000537103 COL24A1Q17RW2 1714 aa8.62□□□□□ -1.03
IFT88-207ENST00000537103 STK25O00506 426 aa8.62□□□□□ -1.03
IFT88-207ENST00000537103 CDK11BP21127 795 aaKnown RBP8.62□□□□□ -1.03
IFT88-207ENST00000537103 TEX13AQ9BXU3 409 aaPredicted RBP8.62□□□□□ -1.03
IFT88-207ENST00000537103 TJP1Q07157 1748 aa8.62□□□□□ -1.03
IFT88-207ENST00000537103 HEG1Q9ULI3 1381 aa8.62□□□□□ -1.03
IFT88-207ENST00000537103 HMOX1P09601 288 aa8.62□□□□□ -1.03
IFT88-207ENST00000537103 RGS22Q8NE09 1264 aa8.62□□□□□ -1.03
IFT88-207ENST00000537103 IFT57Q9NWB7 429 aa8.62□□□□□ -1.03
IFT88-207ENST00000537103 ERBB4Q15303 1308 aa8.61□□□□□ -1.03
IFT88-207ENST00000537103 BAG6P46379 1132 aa8.61□□□□□ -1.03
IFT88-207ENST00000537103 ZNF521Q96K83 1311 aa8.61□□□□□ -1.03
IFT88-207ENST00000537103 ABCB7O75027 752 aa8.61□□□□□ -1.03
IFT88-207ENST00000537103 SF3B2Q13435 895 aaKnown RBP8.61□□□□□ -1.03
IFT88-207ENST00000537103 FOXD4L5Q5VV16 416 aaPredicted RBP8.61□□□□□ -1.03
IFT88-207ENST00000537103 FOXD4L4Q8WXT5 416 aaPredicted RBP8.61□□□□□ -1.03
IFT88-207ENST00000537103 PHACTR3Q96KR7 559 aa8.61□□□□□ -1.03
IFT88-207ENST00000537103 TMOD3Q9NYL9 352 aa8.61□□□□□ -1.03
IFT88-207ENST00000537103 ZMYND10O75800 440 aa8.6□□□□□ -1.03
IFT88-207ENST00000537103 CT47B1P0C2W7 299 aaPredicted RBP8.6□□□□□ -1.03
IFT88-207ENST00000537103 ZNF853P0CG23 659 aa8.6□□□□□ -1.03
IFT88-207ENST00000537103 TAF7Q15545 349 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms