RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 RALBP1Q15311 655 aa17.63■□□□□ 0.41
PRKDC-206ENST00000536429 SMIM5Q71RC9 77 aa17.63■□□□□ 0.41
PRKDC-206ENST00000536429 LINC00116Q8NCU8 138 aa17.63■□□□□ 0.41
PRKDC-206ENST00000536429 PTGER2P43116 358 aa17.62■□□□□ 0.41
PRKDC-206ENST00000536429 SLC52A2Q9HAB3 445 aa17.62■□□□□ 0.41
PRKDC-206ENST00000536429 ATP6V1AP38606 617 aa17.61■□□□□ 0.41
PRKDC-206ENST00000536429 COL23A1Q86Y22 540 aaPredicted RBP17.6■□□□□ 0.41
PRKDC-206ENST00000536429 GAS2L2Q8NHY3 880 aa17.6■□□□□ 0.41
PRKDC-206ENST00000536429 RBM42Q9BTD8 480 aaKnown RBP17.6■□□□□ 0.41
PRKDC-206ENST00000536429 MTFR1LQ9H019 292 aa17.6■□□□□ 0.41
PRKDC-206ENST00000536429 MRC1P22897 1456 aa17.59■□□□□ 0.41
PRKDC-206ENST00000536429 MAP3K5Q99683 1374 aa17.59■□□□□ 0.41
PRKDC-206ENST00000536429 PTCD1O75127 700 aaKnown RBP17.59■□□□□ 0.41
PRKDC-206ENST00000536429 FCHSD2O94868 740 aa17.59■□□□□ 0.41
PRKDC-206ENST00000536429 IL17REQ8NFR9 667 aa17.59■□□□□ 0.41
PRKDC-206ENST00000536429 SGIP1Q9BQI5 828 aa17.59■□□□□ 0.41
PRKDC-206ENST00000536429 C5P01031 1676 aa17.58■□□□□ 0.41
PRKDC-206ENST00000536429 GNAT3A8MTJ3 354 aa17.58■□□□□ 0.4
PRKDC-206ENST00000536429 SLC39A6Q13433 755 aa17.58■□□□□ 0.4
PRKDC-206ENST00000536429 TUBGCP6Q96RT7 1819 aa17.58■□□□□ 0.4
PRKDC-206ENST00000536429 MYBBP1AQ9BQG0 1328 aaKnown RBP17.57■□□□□ 0.4
PRKDC-206ENST00000536429 AK7Q96M32 723 aa17.57■□□□□ 0.4
PRKDC-206ENST00000536429 C4BP0C0L5 1744 aa17.57■□□□□ 0.4
PRKDC-206ENST00000536429 SCN11AQ9UI33 1791 aa17.56■□□□□ 0.4
PRKDC-206ENST00000536429 ADAMTS7Q9UKP4 1686 aa17.56■□□□□ 0.4
PRKDC-206ENST00000536429 PHF14O94880 888 aa17.56■□□□□ 0.4
PRKDC-206ENST00000536429 PRKRIP1Q9H875 184 aaPredicted RBP17.56■□□□□ 0.4
PRKDC-206ENST00000536429 PPP1R1BQ9UD71 204 aaPredicted RBP17.56■□□□□ 0.4
PRKDC-206ENST00000536429 TAF1LQ8IZX4 1826 aa17.56■□□□□ 0.4
PRKDC-206ENST00000536429 ZNF316A6NFI3 1004 aaPredicted RBP17.55■□□□□ 0.4
PRKDC-206ENST00000536429 MSH5O43196 834 aa17.55■□□□□ 0.4
PRKDC-206ENST00000536429 PLEKHF1Q96S99 279 aa17.55■□□□□ 0.4
PRKDC-206ENST00000536429 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.54■□□□□ 0.4
PRKDC-206ENST00000536429 GNPATO15228 680 aa17.54■□□□□ 0.4
PRKDC-206ENST00000536429 MSL1Q68DK7 614 aa17.54■□□□□ 0.4
PRKDC-206ENST00000536429 SLC16A10Q8TF71 515 aa17.54■□□□□ 0.4
PRKDC-206ENST00000536429 CEMIPQ8WUJ3 1361 aa17.53■□□□□ 0.4
PRKDC-206ENST00000536429 QSER1Q2KHR3 1735 aa17.53■□□□□ 0.4
PRKDC-206ENST00000536429 DCTN1Q14203 1278 aa17.53■□□□□ 0.4
PRKDC-206ENST00000536429 MCM10Q7L590 875 aa17.53■□□□□ 0.4
PRKDC-206ENST00000536429 KCPQ6ZWJ8 1503 aa17.52■□□□□ 0.39
PRKDC-206ENST00000536429 TEFQ10587 303 aa17.51■□□□□ 0.39
PRKDC-206ENST00000536429 DNAJC10Q8IXB1 793 aa17.51■□□□□ 0.39
PRKDC-206ENST00000536429 CNTNAP4Q9C0A0 1308 aa17.5■□□□□ 0.39
PRKDC-206ENST00000536429 SSFA2P28290 1259 aa17.5■□□□□ 0.39
PRKDC-206ENST00000536429 FLAD1Q8NFF5 587 aa17.5■□□□□ 0.39
PRKDC-206ENST00000536429 ARXQ96QS3 562 aa17.5■□□□□ 0.39
PRKDC-206ENST00000536429 KCNQ3O43525 872 aa17.49■□□□□ 0.39
PRKDC-206ENST00000536429 HMGB2P26583 209 aaKnown RBP17.49■□□□□ 0.39
PRKDC-206ENST00000536429 CRKLP46109 303 aaKnown RBP17.49■□□□□ 0.39
PRKDC-206ENST00000536429 RC3H1Q5TC82 1133 aaKnown RBP17.49■□□□□ 0.39
PRKDC-206ENST00000536429 FHDC1Q9C0D6 1143 aaPredicted RBP17.49■□□□□ 0.39
PRKDC-206ENST00000536429 UBR3Q6ZT12 1888 aa17.48■□□□□ 0.39
PRKDC-206ENST00000536429 UTRNP46939 3433 aa17.48■□□□□ 0.39
PRKDC-206ENST00000536429 INTS5Q6P9B9 1019 aaKnown RBP17.48■□□□□ 0.39
PRKDC-206ENST00000536429 ZNF831Q5JPB2 1677 aa17.48■□□□□ 0.39
PRKDC-206ENST00000536429 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
PRKDC-206ENST00000536429 ZNF790Q6PG37 636 aa17.47■□□□□ 0.39
PRKDC-206ENST00000536429 RTF1Q92541 710 aaKnown RBP17.47■□□□□ 0.39
PRKDC-206ENST00000536429 ZNF496Q96IT1 587 aaPredicted RBP17.47■□□□□ 0.39
PRKDC-206ENST00000536429 RTCBQ9Y3I0 505 aaKnown RBP17.47■□□□□ 0.39
PRKDC-206ENST00000536429 TJP1Q07157 1748 aa17.47■□□□□ 0.39
PRKDC-206ENST00000536429 BTBD11A6QL63 1104 aa17.46■□□□□ 0.39
PRKDC-206ENST00000536429 RPS6KA4O75676 772 aa17.46■□□□□ 0.39
PRKDC-206ENST00000536429 CYP19A1P11511 503 aaPredicted RBP17.46■□□□□ 0.39
PRKDC-206ENST00000536429 POLD1P28340 1107 aa17.46■□□□□ 0.39
PRKDC-206ENST00000536429 CCDC146Q8IYE0 955 aa17.46■□□□□ 0.39
PRKDC-206ENST00000536429 TTC5Q8N0Z6 440 aa17.46■□□□□ 0.39
PRKDC-206ENST00000536429 ARHGEF1Q92888 912 aaKnown RBP17.46■□□□□ 0.39
PRKDC-206ENST00000536429 SYT17Q9BSW7 474 aa17.46■□□□□ 0.39
PRKDC-206ENST00000536429 THUMPD2Q9BTF0 503 aaKnown RBP17.46■□□□□ 0.39
PRKDC-206ENST00000536429 VIRMAQ69YN4 1812 aaKnown RBP17.46■□□□□ 0.39
PRKDC-206ENST00000536429 COL5A3P25940 1745 aaPredicted RBP17.46■□□□□ 0.39
PRKDC-206ENST00000536429 HTATSF1O43719 755 aaKnown RBP17.45■□□□□ 0.38
PRKDC-206ENST00000536429 CCDC184Q52MB2 194 aa17.45■□□□□ 0.38
PRKDC-206ENST00000536429 TRAPPC3LQ5T215 181 aa17.45■□□□□ 0.38
PRKDC-206ENST00000536429 MYH14Q7Z406 1995 aaKnown RBP17.45■□□□□ 0.38
PRKDC-206ENST00000536429 MAPK8IP3Q9UPT6 1336 aa17.45■□□□□ 0.38
PRKDC-206ENST00000536429 NEFMP07197 916 aa17.44■□□□□ 0.38
PRKDC-206ENST00000536429 MIS18AQ9NYP9 233 aa17.44■□□□□ 0.38
PRKDC-206ENST00000536429 ADAMTS8Q9UP79 889 aa17.44■□□□□ 0.38
PRKDC-206ENST00000536429 GOLGB1Q14789 3259 aaKnown RBP17.44■□□□□ 0.38
PRKDC-206ENST00000536429 COL24A1Q17RW2 1714 aa17.44■□□□□ 0.38
PRKDC-206ENST00000536429 SIPA1L3O60292 1781 aaPredicted RBP17.43■□□□□ 0.38
PRKDC-206ENST00000536429 VSIG10Q8N0Z9 540 aa17.43■□□□□ 0.38
PRKDC-206ENST00000536429 KLHL34Q8N239 644 aa17.43■□□□□ 0.38
PRKDC-206ENST00000536429 CCDC87Q9NVE4 849 aa17.43■□□□□ 0.38
PRKDC-206ENST00000536429 ZBTB1Q9Y2K1 713 aa17.43■□□□□ 0.38
PRKDC-206ENST00000536429 CICQ96RK0 1608 aaPredicted RBP17.43■□□□□ 0.38
PRKDC-206ENST00000536429 HEG1Q9ULI3 1381 aa17.42■□□□□ 0.38
PRKDC-206ENST00000536429 WDR43Q15061 677 aaKnown RBP eCLIP17.42■□□□□ 0.38
PRKDC-206ENST00000536429 PNNQ9H307 717 aaKnown RBP17.42■□□□□ 0.38
PRKDC-206ENST00000536429 SRP68Q9UHB9 627 aaKnown RBP17.42■□□□□ 0.38
PRKDC-206ENST00000536429 RRP7AQ9Y3A4 280 aaKnown RBP17.42■□□□□ 0.38
PRKDC-206ENST00000536429 UBR2Q8IWV8 1755 aa17.42■□□□□ 0.38
PRKDC-206ENST00000536429 PRAMEF22A3QJZ6 481 aa17.41■□□□□ 0.38
PRKDC-206ENST00000536429 ADRA2BP18089 450 aa17.41■□□□□ 0.38
PRKDC-206ENST00000536429 FMNL2Q96PY5 1086 aa17.41■□□□□ 0.38
PRKDC-206ENST00000536429 SOS1Q07889 1333 aaPredicted RBP17.41■□□□□ 0.38
PRKDC-206ENST00000536429 GYS1P13807 737 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms