RNA–Protein interactions for RNA: ENST00000535459.5

SOD2-208, Transcript of superoxide dismutase 2, humanhuman

TSL 2

Gene SOD2, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-208ENST00000535459 SLC4A9Q96Q91 983 aa16.43■□□□□ 0.22
SOD2-208ENST00000535459 STK32BQ9NY57 414 aa16.43■□□□□ 0.22
SOD2-208ENST00000535459 ERVV-2B6SEH9 535 aa16.42■□□□□ 0.22
SOD2-208ENST00000535459 HSP90AB1P08238 724 aaKnown RBP16.42■□□□□ 0.22
SOD2-208ENST00000535459 MAPK8IP2Q13387 824 aaPredicted RBP16.42■□□□□ 0.22
SOD2-208ENST00000535459 CCDC184Q52MB2 194 aa16.42■□□□□ 0.22
SOD2-208ENST00000535459 IL17REQ8NFR9 667 aa16.42■□□□□ 0.22
SOD2-208ENST00000535459 SIPA1L3O60292 1781 aaPredicted RBP16.41■□□□□ 0.22
SOD2-208ENST00000535459 MYH14Q7Z406 1995 aaKnown RBP16.41■□□□□ 0.22
SOD2-208ENST00000535459 SLC39A6Q13433 755 aa16.41■□□□□ 0.22
SOD2-208ENST00000535459 ITPK1Q13572 414 aa16.41■□□□□ 0.22
SOD2-208ENST00000535459 SLC27A3Q5K4L6 730 aa16.41■□□□□ 0.22
SOD2-208ENST00000535459 AMIGO3Q86WK7 504 aa16.41■□□□□ 0.22
SOD2-208ENST00000535459 C4BP0C0L5 1744 aa16.4■□□□□ 0.22
SOD2-208ENST00000535459 LOC102724428A0A0B4J2F2 783 aa16.4■□□□□ 0.22
SOD2-208ENST00000535459 ZBTB7AO95365 584 aa16.4■□□□□ 0.22
SOD2-208ENST00000535459 SIK1P57059 783 aa16.4■□□□□ 0.22
SOD2-208ENST00000535459 DCTN1Q14203 1278 aa16.4■□□□□ 0.22
SOD2-208ENST00000535459 LINC00116Q8NCU8 138 aa16.4■□□□□ 0.22
SOD2-208ENST00000535459 RBM42Q9BTD8 480 aaKnown RBP16.4■□□□□ 0.22
SOD2-208ENST00000535459 UBR3Q6ZT12 1888 aa16.39■□□□□ 0.22
SOD2-208ENST00000535459 MAP3K5Q99683 1374 aa16.39■□□□□ 0.21
SOD2-208ENST00000535459 FCHSD2O94868 740 aa16.39■□□□□ 0.21
SOD2-208ENST00000535459 SMARCC1Q92922 1105 aaPredicted RBP16.39■□□□□ 0.21
SOD2-208ENST00000535459 PLEKHF1Q96S99 279 aa16.39■□□□□ 0.21
SOD2-208ENST00000535459 QSER1Q2KHR3 1735 aa16.39■□□□□ 0.21
SOD2-208ENST00000535459 MRC1P22897 1456 aa16.38■□□□□ 0.21
SOD2-208ENST00000535459 PTCD1O75127 700 aaKnown RBP16.38■□□□□ 0.21
SOD2-208ENST00000535459 SLC52A2Q9HAB3 445 aa16.38■□□□□ 0.21
SOD2-208ENST00000535459 ATF5Q9Y2D1 282 aaPredicted RBP16.38■□□□□ 0.21
SOD2-208ENST00000535459 PNPLA7Q6ZV29 1317 aa16.38■□□□□ 0.21
SOD2-208ENST00000535459 LRP5O75197 1615 aa16.37■□□□□ 0.21
SOD2-208ENST00000535459 COL5A3P25940 1745 aaPredicted RBP16.37■□□□□ 0.21
SOD2-208ENST00000535459 TJP1Q07157 1748 aa16.37■□□□□ 0.21
SOD2-208ENST00000535459 GNAT3A8MTJ3 354 aa16.37■□□□□ 0.21
SOD2-208ENST00000535459 ATP6V1AP38606 617 aa16.37■□□□□ 0.21
SOD2-208ENST00000535459 MCM10Q7L590 875 aa16.37■□□□□ 0.21
SOD2-208ENST00000535459 CCDC146Q8IYE0 955 aa16.37■□□□□ 0.21
SOD2-208ENST00000535459 GAS2L2Q8NHY3 880 aa16.37■□□□□ 0.21
SOD2-208ENST00000535459 TFCP2L1Q9NZI6 479 aa16.36■□□□□ 0.21
SOD2-208ENST00000535459 KCNQ3O43525 872 aa16.35■□□□□ 0.21
SOD2-208ENST00000535459 UBR2Q8IWV8 1755 aa16.34■□□□□ 0.21
SOD2-208ENST00000535459 SENP3-EIF4A1A0A087X0R7 540 aa16.34■□□□□ 0.21
SOD2-208ENST00000535459 COL23A1Q86Y22 540 aaPredicted RBP16.34■□□□□ 0.21
SOD2-208ENST00000535459 THUMPD2Q9BTF0 503 aaKnown RBP16.34■□□□□ 0.21
SOD2-208ENST00000535459 PHF14O94880 888 aa16.33■□□□□ 0.2
SOD2-208ENST00000535459 ADAMTS8Q9UP79 889 aa16.33■□□□□ 0.2
SOD2-208ENST00000535459 RRP7AQ9Y3A4 280 aaKnown RBP16.33■□□□□ 0.2
SOD2-208ENST00000535459 KCPQ6ZWJ8 1503 aa16.33■□□□□ 0.2
SOD2-208ENST00000535459 CEMIPQ8WUJ3 1361 aa16.32■□□□□ 0.2
SOD2-208ENST00000535459 ZNF831Q5JPB2 1677 aa16.31■□□□□ 0.2
SOD2-208ENST00000535459 PTGER2P43116 358 aa16.31■□□□□ 0.2
SOD2-208ENST00000535459 MIS18AQ9NYP9 233 aa16.31■□□□□ 0.2
SOD2-208ENST00000535459 TEFQ10587 303 aa16.3■□□□□ 0.2
SOD2-208ENST00000535459 NFE2L2Q16236 605 aa16.3■□□□□ 0.2
SOD2-208ENST00000535459 MSL1Q68DK7 614 aa16.3■□□□□ 0.2
SOD2-208ENST00000535459 DNAJC10Q8IXB1 793 aa16.3■□□□□ 0.2
SOD2-208ENST00000535459 AK7Q96M32 723 aa16.3■□□□□ 0.2
SOD2-208ENST00000535459 SPON1Q9HCB6 807 aa16.3■□□□□ 0.2
SOD2-208ENST00000535459 GNPATO15228 680 aa16.29■□□□□ 0.2
SOD2-208ENST00000535459 COL24A1Q17RW2 1714 aa16.28■□□□□ 0.2
SOD2-208ENST00000535459 WDR43Q15061 677 aaKnown RBP eCLIP16.28■□□□□ 0.2
SOD2-208ENST00000535459 NEUROD2Q15784 382 aa16.28■□□□□ 0.2
SOD2-208ENST00000535459 RTF1Q92541 710 aaKnown RBP16.28■□□□□ 0.2
SOD2-208ENST00000535459 ZNF496Q96IT1 587 aaPredicted RBP16.28■□□□□ 0.2
SOD2-208ENST00000535459 C4AP0C0L4 1744 aa16.28■□□□□ 0.2
SOD2-208ENST00000535459 MAPK8IP3Q9UPT6 1336 aa16.27■□□□□ 0.2
SOD2-208ENST00000535459 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.27■□□□□ 0.2
SOD2-208ENST00000535459 PRAMEF22A3QJZ6 481 aa16.27■□□□□ 0.2
SOD2-208ENST00000535459 BTBD11A6QL63 1104 aa16.27■□□□□ 0.2
SOD2-208ENST00000535459 ANP32CO43423 234 aa16.27■□□□□ 0.2
SOD2-208ENST00000535459 PPP4R3CPQ6ZMV5 832 aa16.27■□□□□ 0.2
SOD2-208ENST00000535459 SGIP1Q9BQI5 828 aa16.27■□□□□ 0.2
SOD2-208ENST00000535459 MTFR1LQ9H019 292 aa16.27■□□□□ 0.2
SOD2-208ENST00000535459 CICQ96RK0 1608 aaPredicted RBP16.27■□□□□ 0.19
SOD2-208ENST00000535459 TMPOP42166 694 aaKnown RBP16.26■□□□□ 0.19
SOD2-208ENST00000535459 CRKLP46109 303 aaKnown RBP16.26■□□□□ 0.19
SOD2-208ENST00000535459 RIPK4P57078 832 aa16.26■□□□□ 0.19
SOD2-208ENST00000535459 ZNF790Q6PG37 636 aa16.26■□□□□ 0.19
SOD2-208ENST00000535459 NEFMP07197 916 aa16.25■□□□□ 0.19
SOD2-208ENST00000535459 INTS5Q6P9B9 1019 aaKnown RBP16.25■□□□□ 0.19
SOD2-208ENST00000535459 KDM3BQ7LBC6 1761 aa16.25■□□□□ 0.19
SOD2-208ENST00000535459 RUNDC1Q96C34 613 aa16.24■□□□□ 0.19
SOD2-208ENST00000535459 CNTNAP4Q9C0A0 1308 aa16.23■□□□□ 0.19
SOD2-208ENST00000535459 HTATSF1O43719 755 aaKnown RBP16.23■□□□□ 0.19
SOD2-208ENST00000535459 CYP19A1P11511 503 aaPredicted RBP16.23■□□□□ 0.19
SOD2-208ENST00000535459 PIP4K2AP48426 406 aaPredicted RBP16.23■□□□□ 0.19
SOD2-208ENST00000535459 TTC5Q8N0Z6 440 aa16.23■□□□□ 0.19
SOD2-208ENST00000535459 ARHGEF1Q92888 912 aaKnown RBP16.23■□□□□ 0.19
SOD2-208ENST00000535459 PPP1R1BQ9UD71 204 aaPredicted RBP16.23■□□□□ 0.19
SOD2-208ENST00000535459 TAF7Q15545 349 aaPredicted RBP16.22■□□□□ 0.19
SOD2-208ENST00000535459 RC3H1Q5TC82 1133 aaKnown RBP16.22■□□□□ 0.19
SOD2-208ENST00000535459 PNNQ9H307 717 aaKnown RBP16.22■□□□□ 0.19
SOD2-208ENST00000535459 MRS2Q9HD23 443 aa16.22■□□□□ 0.19
SOD2-208ENST00000535459 SRP68Q9UHB9 627 aaKnown RBP16.22■□□□□ 0.19
SOD2-208ENST00000535459 TRIM35Q9UPQ4 493 aa16.22■□□□□ 0.19
SOD2-208ENST00000535459 ZBTB1Q9Y2K1 713 aa16.22■□□□□ 0.19
SOD2-208ENST00000535459 HEG1Q9ULI3 1381 aa16.22■□□□□ 0.19
SOD2-208ENST00000535459 APAF1O14727 1248 aa16.21■□□□□ 0.19
SOD2-208ENST00000535459 RPS6KA4O75676 772 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms