RNA–Protein interactions for RNA: ENST00000535177.1

CYB561A3-205, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,026 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-205ENST00000535177 RUNDC1Q96C34 613 aa18.95■□□□□ 0.62
CYB561A3-205ENST00000535177 PHACTR3Q96KR7 559 aa18.95■□□□□ 0.62
CYB561A3-205ENST00000535177 ZNF530Q6P9A1 599 aaPredicted RBP18.94■□□□□ 0.62
CYB561A3-205ENST00000535177 GAS2L2Q8NHY3 880 aa18.94■□□□□ 0.62
CYB561A3-205ENST00000535177 MTHFSDQ2M296 383 aaKnown RBP18.93■□□□□ 0.62
CYB561A3-205ENST00000535177 CYP27B1O15528 508 aa18.92■□□□□ 0.62
CYB561A3-205ENST00000535177 PHKG2P15735 406 aa18.92■□□□□ 0.62
CYB561A3-205ENST00000535177 C1orf141Q5JVX7 400 aa18.92■□□□□ 0.62
CYB561A3-205ENST00000535177 CHD4Q14839 1912 aa18.92■□□□□ 0.62
CYB561A3-205ENST00000535177 MAP3K5Q99683 1374 aa18.92■□□□□ 0.62
CYB561A3-205ENST00000535177 IFNL2Q8IZJ0 200 aa18.91■□□□□ 0.62
CYB561A3-205ENST00000535177 SLC16A10Q8TF71 515 aa18.91■□□□□ 0.62
CYB561A3-205ENST00000535177 NFE2L2Q16236 605 aa18.9■□□□□ 0.62
CYB561A3-205ENST00000535177 AKAP4Q5JQC9 854 aa18.9■□□□□ 0.62
CYB561A3-205ENST00000535177 ITGB4P16144 1822 aa18.9■□□□□ 0.62
CYB561A3-205ENST00000535177 TOGARAM1Q9Y4F4 1720 aa18.89■□□□□ 0.61
CYB561A3-205ENST00000535177 TFCP2L1Q9NZI6 479 aa18.89■□□□□ 0.61
CYB561A3-205ENST00000535177 ADAMTS7Q9UKP4 1686 aa18.89■□□□□ 0.61
CYB561A3-205ENST00000535177 TAF1LQ8IZX4 1826 aa18.88■□□□□ 0.61
CYB561A3-205ENST00000535177 HSP90AB1P08238 724 aaKnown RBP18.88■□□□□ 0.61
CYB561A3-205ENST00000535177 CCNL1Q9UK58 526 aaPredicted RBP18.88■□□□□ 0.61
CYB561A3-205ENST00000535177 KDM6AO15550 1401 aaPredicted RBP18.88■□□□□ 0.61
CYB561A3-205ENST00000535177 DLG5Q8TDM6 1919 aa18.88■□□□□ 0.61
CYB561A3-205ENST00000535177 TMPOP42166 694 aaKnown RBP18.87■□□□□ 0.61
CYB561A3-205ENST00000535177 GOLGB1Q14789 3259 aaKnown RBP18.87■□□□□ 0.61
CYB561A3-205ENST00000535177 GNAT3A8MTJ3 354 aa18.86■□□□□ 0.61
CYB561A3-205ENST00000535177 APAF1O14727 1248 aa18.86■□□□□ 0.61
CYB561A3-205ENST00000535177 NKX1-1Q15270 411 aaPredicted RBP18.86■□□□□ 0.61
CYB561A3-205ENST00000535177 COL23A1Q86Y22 540 aaPredicted RBP18.86■□□□□ 0.61
CYB561A3-205ENST00000535177 SCN11AQ9UI33 1791 aa18.86■□□□□ 0.61
CYB561A3-205ENST00000535177 C5P01031 1676 aa18.85■□□□□ 0.61
CYB561A3-205ENST00000535177 MRC1P22897 1456 aa18.85■□□□□ 0.61
CYB561A3-205ENST00000535177 ZNF784Q8NCA9 323 aaPredicted RBP18.85■□□□□ 0.61
CYB561A3-205ENST00000535177 DCAF5Q96JK2 942 aa18.85■□□□□ 0.61
CYB561A3-205ENST00000535177 RRP7AQ9Y3A4 280 aaKnown RBP18.85■□□□□ 0.61
CYB561A3-205ENST00000535177 VIRMAQ69YN4 1812 aaKnown RBP18.84■□□□□ 0.61
CYB561A3-205ENST00000535177 RTF1Q92541 710 aaKnown RBP18.84■□□□□ 0.61
CYB561A3-205ENST00000535177 HTATSF1O43719 755 aaKnown RBP18.83■□□□□ 0.6
CYB561A3-205ENST00000535177 RIPK4P57078 832 aa18.83■□□□□ 0.6
CYB561A3-205ENST00000535177 LMOD3Q0VAK6 560 aa18.83■□□□□ 0.6
CYB561A3-205ENST00000535177 MPRIPQ6WCQ1 1025 aa18.83■□□□□ 0.6
CYB561A3-205ENST00000535177 NEUROD2Q15784 382 aa18.82■□□□□ 0.6
CYB561A3-205ENST00000535177 NLGN2Q8NFZ4 835 aa18.82■□□□□ 0.6
CYB561A3-205ENST00000535177 CEMIPQ8WUJ3 1361 aa18.81■□□□□ 0.6
CYB561A3-205ENST00000535177 RNMTO43148 476 aaKnown RBP18.81■□□□□ 0.6
CYB561A3-205ENST00000535177 POLD1P28340 1107 aa18.81■□□□□ 0.6
CYB561A3-205ENST00000535177 SENP3-EIF4A1A0A087X0R7 540 aa18.8■□□□□ 0.6
CYB561A3-205ENST00000535177 AMIGO3Q86WK7 504 aa18.8■□□□□ 0.6
CYB561A3-205ENST00000535177 PIGBQ92521 554 aa18.8■□□□□ 0.6
CYB561A3-205ENST00000535177 MCM10Q7L590 875 aa18.79■□□□□ 0.6
CYB561A3-205ENST00000535177 IL17REQ8NFR9 667 aa18.79■□□□□ 0.6
CYB561A3-205ENST00000535177 LGR6Q9HBX8 967 aa18.79■□□□□ 0.6
CYB561A3-205ENST00000535177 PALLDQ8WX93 1383 aa18.79■□□□□ 0.6
CYB561A3-205ENST00000535177 SIPA1L3O60292 1781 aaPredicted RBP18.78■□□□□ 0.6
CYB561A3-205ENST00000535177 ERVV-2B6SEH9 535 aa18.78■□□□□ 0.6
CYB561A3-205ENST00000535177 DCTN1Q14203 1278 aa18.78■□□□□ 0.6
CYB561A3-205ENST00000535177 GPR162Q16538 588 aa18.78■□□□□ 0.6
CYB561A3-205ENST00000535177 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
CYB561A3-205ENST00000535177 KLHL34Q8N239 644 aa18.78■□□□□ 0.6
CYB561A3-205ENST00000535177 NGEFQ8N5V2 710 aa18.78■□□□□ 0.6
CYB561A3-205ENST00000535177 TRIM35Q9UPQ4 493 aa18.78■□□□□ 0.6
CYB561A3-205ENST00000535177 UBR3Q6ZT12 1888 aa18.77■□□□□ 0.6
CYB561A3-205ENST00000535177 C4BP0C0L5 1744 aa18.77■□□□□ 0.6
CYB561A3-205ENST00000535177 CCDC27Q2M243 656 aa18.77■□□□□ 0.6
CYB561A3-205ENST00000535177 SMIM5Q71RC9 77 aa18.77■□□□□ 0.6
CYB561A3-205ENST00000535177 TMOD3Q9NYL9 352 aa18.77■□□□□ 0.6
CYB561A3-205ENST00000535177 MSH5O43196 834 aa18.76■□□□□ 0.59
CYB561A3-205ENST00000535177 CABP4P57796 275 aa18.76■□□□□ 0.59
CYB561A3-205ENST00000535177 TEFQ10587 303 aa18.76■□□□□ 0.59
CYB561A3-205ENST00000535177 MSL1Q68DK7 614 aa18.76■□□□□ 0.59
CYB561A3-205ENST00000535177 THUMPD2Q9BTF0 503 aaKnown RBP18.76■□□□□ 0.59
CYB561A3-205ENST00000535177 SLC52A2Q9HAB3 445 aa18.76■□□□□ 0.59
CYB561A3-205ENST00000535177 SALL2Q9Y467 1007 aaPredicted RBP18.75■□□□□ 0.59
CYB561A3-205ENST00000535177 YBX3P16989 372 aaKnown RBP eCLIP18.74■□□□□ 0.59
CYB561A3-205ENST00000535177 HNRNPUQ00839 825 aaKnown RBP eCLIP18.73■□□□□ 0.59
CYB561A3-205ENST00000535177 WWC1Q8IX03 1113 aa18.73■□□□□ 0.59
CYB561A3-205ENST00000535177 SMARCC1Q92922 1105 aaPredicted RBP18.73■□□□□ 0.59
CYB561A3-205ENST00000535177 CALD1Q05682 793 aaKnown RBP18.72■□□□□ 0.59
CYB561A3-205ENST00000535177 NFATC2IPQ8NCF5 419 aa18.72■□□□□ 0.59
CYB561A3-205ENST00000535177 ASAP1Q9ULH1 1129 aa18.72■□□□□ 0.59
CYB561A3-205ENST00000535177 PELP1Q8IZL8 1130 aaKnown RBP18.71■□□□□ 0.59
CYB561A3-205ENST00000535177 LINC00116Q8NCU8 138 aa18.71■□□□□ 0.59
CYB561A3-205ENST00000535177 KDM3BQ7LBC6 1761 aa18.7■□□□□ 0.58
CYB561A3-205ENST00000535177 LOC102724428A0A0B4J2F2 783 aa18.7■□□□□ 0.58
CYB561A3-205ENST00000535177 SIK1P57059 783 aa18.7■□□□□ 0.58
CYB561A3-205ENST00000535177 ITPK1Q13572 414 aa18.7■□□□□ 0.58
CYB561A3-205ENST00000535177 FLAD1Q8NFF5 587 aa18.7■□□□□ 0.58
CYB561A3-205ENST00000535177 ZNF521Q96K83 1311 aa18.7■□□□□ 0.58
CYB561A3-205ENST00000535177 TAF7Q15545 349 aaPredicted RBP18.69■□□□□ 0.58
CYB561A3-205ENST00000535177 ATG3Q9NT62 314 aa18.69■□□□□ 0.58
CYB561A3-205ENST00000535177 UBR2Q8IWV8 1755 aa18.68■□□□□ 0.58
CYB561A3-205ENST00000535177 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.68■□□□□ 0.58
CYB561A3-205ENST00000535177 BTBD11A6QL63 1104 aa18.68■□□□□ 0.58
CYB561A3-205ENST00000535177 IL16Q14005 1332 aa18.68■□□□□ 0.58
CYB561A3-205ENST00000535177 WDR63Q8IWG1 891 aa18.67■□□□□ 0.58
CYB561A3-205ENST00000535177 AK7Q96M32 723 aa18.67■□□□□ 0.58
CYB561A3-205ENST00000535177 IFT57Q9NWB7 429 aa18.67■□□□□ 0.58
CYB561A3-205ENST00000535177 CD2APQ9Y5K6 639 aa18.67■□□□□ 0.58
CYB561A3-205ENST00000535177 KCPQ6ZWJ8 1503 aa18.67■□□□□ 0.58
CYB561A3-205ENST00000535177 PHF14O94880 888 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms