RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 MBIPQ9NS73 344 aa13.07□□□□□ -0.32
RPS3-219ENST00000534440 SCN11AQ9UI33 1791 aa13.07□□□□□ -0.32
RPS3-219ENST00000534440 HTATSF1O43719 755 aaKnown RBP13.06□□□□□ -0.32
RPS3-219ENST00000534440 TRIM37O94972 964 aa13.06□□□□□ -0.32
RPS3-219ENST00000534440 EVA1CP58658 441 aa13.06□□□□□ -0.32
RPS3-219ENST00000534440 CALD1Q05682 793 aaKnown RBP13.06□□□□□ -0.32
RPS3-219ENST00000534440 EXOSC9Q06265 439 aaKnown RBP13.06□□□□□ -0.32
RPS3-219ENST00000534440 LAS1LQ9Y4W2 734 aaKnown RBP13.06□□□□□ -0.32
RPS3-219ENST00000534440 MRC1P22897 1456 aa13.05□□□□□ -0.32
RPS3-219ENST00000534440 KDM3BQ7LBC6 1761 aa13.05□□□□□ -0.32
RPS3-219ENST00000534440 SLC4A2P04920 1241 aa13.05□□□□□ -0.32
RPS3-219ENST00000534440 GNAI1P63096 354 aa13.05□□□□□ -0.32
RPS3-219ENST00000534440 IRX6P78412 446 aaPredicted RBP13.05□□□□□ -0.32
RPS3-219ENST00000534440 AKAP4Q5JQC9 854 aa13.05□□□□□ -0.32
RPS3-219ENST00000534440 RTF1Q92541 710 aaKnown RBP13.05□□□□□ -0.32
RPS3-219ENST00000534440 CFAP44Q96MT7 982 aa13.05□□□□□ -0.32
RPS3-219ENST00000534440 LGR6Q9HBX8 967 aa13.05□□□□□ -0.32
RPS3-219ENST00000534440 CHL1O00533 1208 aa13.04□□□□□ -0.32
RPS3-219ENST00000534440 CYP27B1O15528 508 aa13.04□□□□□ -0.32
RPS3-219ENST00000534440 IL2RBP14784 551 aa13.04□□□□□ -0.32
RPS3-219ENST00000534440 PHKG2P15735 406 aa13.04□□□□□ -0.32
RPS3-219ENST00000534440 RRP1P56182 461 aaKnown RBP13.04□□□□□ -0.32
RPS3-219ENST00000534440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.04□□□□□ -0.32
RPS3-219ENST00000534440 USP35Q9P2H5 1018 aa13.04□□□□□ -0.32
RPS3-219ENST00000534440 TOGARAM1Q9Y4F4 1720 aa13.04□□□□□ -0.32
RPS3-219ENST00000534440 RNMTO43148 476 aaKnown RBP13.03□□□□□ -0.32
RPS3-219ENST00000534440 C1orf141Q5JVX7 400 aa13.03□□□□□ -0.32
RPS3-219ENST00000534440 MPRIPQ6WCQ1 1025 aa13.03□□□□□ -0.32
RPS3-219ENST00000534440 MIS18AQ9NYP9 233 aa13.03□□□□□ -0.32
RPS3-219ENST00000534440 SPG7Q9UQ90 795 aa13.03□□□□□ -0.32
RPS3-219ENST00000534440 APBA3O96018 575 aa13.02□□□□□ -0.33
RPS3-219ENST00000534440 KRT24Q2M2I5 525 aa13.02□□□□□ -0.33
RPS3-219ENST00000534440 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
RPS3-219ENST00000534440 BCAR3O75815 825 aa13.01□□□□□ -0.33
RPS3-219ENST00000534440 RARSP54136 660 aaKnown RBP13.01□□□□□ -0.33
RPS3-219ENST00000534440 FKBP8Q14318 412 aa13.01□□□□□ -0.33
RPS3-219ENST00000534440 TNS2Q63HR2 1409 aa13.01□□□□□ -0.33
RPS3-219ENST00000534440 UTRNP46939 3433 aa13.01□□□□□ -0.33
RPS3-219ENST00000534440 PCDH11XQ9BZA7 1347 aa13□□□□□ -0.33
RPS3-219ENST00000534440 PCDH11YQ9BZA8 1340 aa13□□□□□ -0.33
RPS3-219ENST00000534440 PLIN1O60240 522 aa13□□□□□ -0.33
RPS3-219ENST00000534440 C8orf58Q8NAV2 365 aa13□□□□□ -0.33
RPS3-219ENST00000534440 ZCRB1Q8TBF4 217 aaKnown RBP13□□□□□ -0.33
RPS3-219ENST00000534440 BCL2L13Q9BXK5 485 aa13□□□□□ -0.33
RPS3-219ENST00000534440 TSPYL4Q9UJ04 414 aa13□□□□□ -0.33
RPS3-219ENST00000534440 THRAP3Q9Y2W1 955 aaKnown RBP13□□□□□ -0.33
RPS3-219ENST00000534440 CT47B1P0C2W7 299 aaPredicted RBP12.99□□□□□ -0.33
RPS3-219ENST00000534440 IFNL2Q8IZJ0 200 aa12.99□□□□□ -0.33
RPS3-219ENST00000534440 PAPPAQ13219 1627 aa12.99□□□□□ -0.33
RPS3-219ENST00000534440 NEFLP07196 543 aa12.98□□□□□ -0.33
RPS3-219ENST00000534440 TAF7Q15545 349 aaPredicted RBP12.98□□□□□ -0.33
RPS3-219ENST00000534440 C20orf194Q5TEA3 1177 aa12.98□□□□□ -0.33
RPS3-219ENST00000534440 TNS1Q9HBL0 1735 aaKnown RBP12.98□□□□□ -0.33
RPS3-219ENST00000534440 ELL2O00472 640 aaPredicted RBP12.97□□□□□ -0.33
RPS3-219ENST00000534440 KCNQ3O43525 872 aa12.97□□□□□ -0.33
RPS3-219ENST00000534440 VAMP4O75379 141 aa12.97□□□□□ -0.33
RPS3-219ENST00000534440 TWISTNBQ3B726 338 aaPredicted RBP12.97□□□□□ -0.33
RPS3-219ENST00000534440 SSH1Q8WYL5 1049 aa12.97□□□□□ -0.33
RPS3-219ENST00000534440 DCAF5Q96JK2 942 aa12.97□□□□□ -0.33
RPS3-219ENST00000534440 C5P01031 1676 aa12.96□□□□□ -0.33
RPS3-219ENST00000534440 TEFQ10587 303 aa12.96□□□□□ -0.33
RPS3-219ENST00000534440 NKX1-1Q15270 411 aaPredicted RBP12.96□□□□□ -0.33
RPS3-219ENST00000534440 SLC52A2Q9HAB3 445 aa12.96□□□□□ -0.33
RPS3-219ENST00000534440 BABAM1Q9NWV8 329 aa12.96□□□□□ -0.33
RPS3-219ENST00000534440 DOT1LQ8TEK3 1739 aa12.96□□□□□ -0.34
RPS3-219ENST00000534440 DDX54Q8TDD1 881 aaKnown RBP12.95□□□□□ -0.34
RPS3-219ENST00000534440 SMC4Q9NTJ3 1288 aa12.95□□□□□ -0.34
RPS3-219ENST00000534440 TNNQ9UQP3 1299 aa12.95□□□□□ -0.34
RPS3-219ENST00000534440 UBR2Q8IWV8 1755 aa12.94□□□□□ -0.34
RPS3-219ENST00000534440 TCERG1O14776 1098 aaKnown RBP12.94□□□□□ -0.34
RPS3-219ENST00000534440 HSP90AB1P08238 724 aaKnown RBP12.94□□□□□ -0.34
RPS3-219ENST00000534440 ITGB4P16144 1822 aa12.93□□□□□ -0.34
RPS3-219ENST00000534440 BTBD11A6QL63 1104 aa12.93□□□□□ -0.34
RPS3-219ENST00000534440 PLSCR1O15162 318 aa12.93□□□□□ -0.34
RPS3-219ENST00000534440 EIF4A1P60842 406 aaKnown RBP12.93□□□□□ -0.34
RPS3-219ENST00000534440 ALDH1L2Q3SY69 923 aa12.93□□□□□ -0.34
RPS3-219ENST00000534440 NBPF14Q5TI25 921 aa12.93□□□□□ -0.34
RPS3-219ENST00000534440 PTF1AQ7RTS3 328 aa12.93□□□□□ -0.34
RPS3-219ENST00000534440 MRPL50Q8N5N7 158 aaKnown RBP12.93□□□□□ -0.34
RPS3-219ENST00000534440 HEG1Q9ULI3 1381 aa12.93□□□□□ -0.34
RPS3-219ENST00000534440 KCPQ6ZWJ8 1503 aa12.93□□□□□ -0.34
RPS3-219ENST00000534440 SLC39A6Q13433 755 aa12.92□□□□□ -0.34
RPS3-219ENST00000534440 PROM2Q8N271 834 aa12.92□□□□□ -0.34
RPS3-219ENST00000534440 NFATC2IPQ8NCF5 419 aa12.92□□□□□ -0.34
RPS3-219ENST00000534440 CRBNQ96SW2 442 aa12.92□□□□□ -0.34
RPS3-219ENST00000534440 CDCA7Q9BWT1 371 aaPredicted RBP12.92□□□□□ -0.34
RPS3-219ENST00000534440 BCL9O00512 1426 aa12.91□□□□□ -0.34
RPS3-219ENST00000534440 KCNQ2O43526 872 aa12.91□□□□□ -0.34
RPS3-219ENST00000534440 MYCNP04198 464 aaPredicted RBP12.91□□□□□ -0.34
RPS3-219ENST00000534440 FRAT1Q92837 279 aaPredicted RBP12.91□□□□□ -0.34
RPS3-219ENST00000534440 ZNF428Q96B54 188 aa12.91□□□□□ -0.34
RPS3-219ENST00000534440 LAMB4A4D0S4 1761 aa12.9□□□□□ -0.34
RPS3-219ENST00000534440 RLBP1P12271 317 aa12.9□□□□□ -0.34
RPS3-219ENST00000534440 BRPF1P55201 1214 aaPredicted RBP12.9□□□□□ -0.34
RPS3-219ENST00000534440 CABP4P57796 275 aa12.9□□□□□ -0.34
RPS3-219ENST00000534440 MARCH10Q8NA82 808 aaPredicted RBP12.9□□□□□ -0.34
RPS3-219ENST00000534440 EXOC6Q8TAG9 804 aa12.9□□□□□ -0.34
RPS3-219ENST00000534440 BCL11BQ9C0K0 894 aaPredicted RBP12.9□□□□□ -0.34
RPS3-219ENST00000534440 SPON1Q9HCB6 807 aa12.9□□□□□ -0.34
RPS3-219ENST00000534440 ANO8Q9HCE9 1232 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms