RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 AMIGO3Q86WK7 504 aa15.41■□□□□ 0.06
CLCF1-202ENST00000533438 FLAD1Q8NFF5 587 aa15.41■□□□□ 0.06
CLCF1-202ENST00000533438 NLGN2Q8NFZ4 835 aa15.41■□□□□ 0.06
CLCF1-202ENST00000533438 DCAF5Q96JK2 942 aa15.41■□□□□ 0.06
CLCF1-202ENST00000533438 ATG3Q9NT62 314 aa15.41■□□□□ 0.06
CLCF1-202ENST00000533438 SCN11AQ9UI33 1791 aa15.41■□□□□ 0.06
CLCF1-202ENST00000533438 ERVV-2B6SEH9 535 aa15.4■□□□□ 0.06
CLCF1-202ENST00000533438 MSH5O43196 834 aa15.4■□□□□ 0.06
CLCF1-202ENST00000533438 HSP90AB1P08238 724 aaKnown RBP15.4■□□□□ 0.06
CLCF1-202ENST00000533438 LINC00116Q8NCU8 138 aa15.4■□□□□ 0.06
CLCF1-202ENST00000533438 AK7Q96M32 723 aa15.4■□□□□ 0.06
CLCF1-202ENST00000533438 GIGYF1O75420 1035 aaPredicted RBP15.39■□□□□ 0.05
CLCF1-202ENST00000533438 ITPK1Q13572 414 aa15.39■□□□□ 0.05
CLCF1-202ENST00000533438 SULT6B1Q6IMI4 303 aa15.39■□□□□ 0.05
CLCF1-202ENST00000533438 ZNF530Q6P9A1 599 aaPredicted RBP15.39■□□□□ 0.05
CLCF1-202ENST00000533438 NPC1L1Q9UHC9 1359 aa15.38■□□□□ 0.05
CLCF1-202ENST00000533438 YBX3P16989 372 aaKnown RBP eCLIP15.38■□□□□ 0.05
CLCF1-202ENST00000533438 MTHFSP49914 203 aa15.38■□□□□ 0.05
CLCF1-202ENST00000533438 CD2APQ9Y5K6 639 aa15.38■□□□□ 0.05
CLCF1-202ENST00000533438 CICQ96RK0 1608 aaPredicted RBP15.37■□□□□ 0.05
CLCF1-202ENST00000533438 SSFA2P28290 1259 aa15.37■□□□□ 0.05
CLCF1-202ENST00000533438 ATP6V1AP38606 617 aa15.37■□□□□ 0.05
CLCF1-202ENST00000533438 IFFO2Q5TF58 517 aa15.37■□□□□ 0.05
CLCF1-202ENST00000533438 MSL1Q68DK7 614 aa15.37■□□□□ 0.05
CLCF1-202ENST00000533438 KLHL34Q8N239 644 aa15.37■□□□□ 0.05
CLCF1-202ENST00000533438 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.36■□□□□ 0.05
CLCF1-202ENST00000533438 CC2D1BQ5T0F9 858 aaKnown RBP15.36■□□□□ 0.05
CLCF1-202ENST00000533438 SMIM5Q71RC9 77 aa15.36■□□□□ 0.05
CLCF1-202ENST00000533438 SLC4A9Q96Q91 983 aa15.36■□□□□ 0.05
CLCF1-202ENST00000533438 COL3A1P02461 1466 aaPredicted RBP15.35■□□□□ 0.05
CLCF1-202ENST00000533438 PHF14O94880 888 aa15.35■□□□□ 0.05
CLCF1-202ENST00000533438 C1orf141Q5JVX7 400 aa15.35■□□□□ 0.05
CLCF1-202ENST00000533438 ADAMTS7Q9UKP4 1686 aa15.35■□□□□ 0.05
CLCF1-202ENST00000533438 MYH14Q7Z406 1995 aaKnown RBP15.35■□□□□ 0.05
CLCF1-202ENST00000533438 CABP4P57796 275 aa15.34■□□□□ 0.05
CLCF1-202ENST00000533438 TJP1Q07157 1748 aa15.34■□□□□ 0.05
CLCF1-202ENST00000533438 GNPATO15228 680 aa15.33■□□□□ 0.04
CLCF1-202ENST00000533438 RBM42Q9BTD8 480 aaKnown RBP15.33■□□□□ 0.04
CLCF1-202ENST00000533438 C4AP0C0L4 1744 aa15.33■□□□□ 0.04
CLCF1-202ENST00000533438 MRC1P22897 1456 aa15.33■□□□□ 0.04
CLCF1-202ENST00000533438 DIAPH1O60610 1272 aaKnown RBP15.32■□□□□ 0.04
CLCF1-202ENST00000533438 AKAP4Q5JQC9 854 aa15.32■□□□□ 0.04
CLCF1-202ENST00000533438 HMOX1P09601 288 aa15.31■□□□□ 0.04
CLCF1-202ENST00000533438 RC3H1Q5TC82 1133 aaKnown RBP15.31■□□□□ 0.04
CLCF1-202ENST00000533438 NFATC2IPQ8NCF5 419 aa15.31■□□□□ 0.04
CLCF1-202ENST00000533438 CNTNAP4Q9C0A0 1308 aa15.31■□□□□ 0.04
CLCF1-202ENST00000533438 ADCY9O60503 1353 aa15.3■□□□□ 0.04
CLCF1-202ENST00000533438 KIF13BQ9NQT8 1826 aa15.3■□□□□ 0.04
CLCF1-202ENST00000533438 PELP1Q8IZL8 1130 aaKnown RBP15.29■□□□□ 0.04
CLCF1-202ENST00000533438 LGR6Q9HBX8 967 aa15.29■□□□□ 0.04
CLCF1-202ENST00000533438 RTCBQ9Y3I0 505 aaKnown RBP15.29■□□□□ 0.04
CLCF1-202ENST00000533438 PTCD1O75127 700 aaKnown RBP15.28■□□□□ 0.04
CLCF1-202ENST00000533438 RPS6KA4O75676 772 aa15.28■□□□□ 0.04
CLCF1-202ENST00000533438 MTHFSDQ2M296 383 aaKnown RBP15.28■□□□□ 0.04
CLCF1-202ENST00000533438 TRAPPC3LQ5T215 181 aa15.28■□□□□ 0.04
CLCF1-202ENST00000533438 SLC52A2Q9HAB3 445 aa15.28■□□□□ 0.04
CLCF1-202ENST00000533438 KIAA1551Q9HCM1 1747 aa15.28■□□□□ 0.04
CLCF1-202ENST00000533438 UBR2Q8IWV8 1755 aa15.27■□□□□ 0.04
CLCF1-202ENST00000533438 RNMTO43148 476 aaKnown RBP15.27■□□□□ 0.04
CLCF1-202ENST00000533438 ADRA2BP18089 450 aa15.27■□□□□ 0.04
CLCF1-202ENST00000533438 ATP10DQ9P241 1426 aa15.26■□□□□ 0.03
CLCF1-202ENST00000533438 ARHGEF1Q92888 912 aaKnown RBP15.26■□□□□ 0.03
CLCF1-202ENST00000533438 KCPQ6ZWJ8 1503 aa15.26■□□□□ 0.03
CLCF1-202ENST00000533438 SIPA1L3O60292 1781 aaPredicted RBP15.26■□□□□ 0.03
CLCF1-202ENST00000533438 HSPA6P17066 643 aa15.25■□□□□ 0.03
CLCF1-202ENST00000533438 CRKLP46109 303 aaKnown RBP15.25■□□□□ 0.03
CLCF1-202ENST00000533438 CNGB1Q14028 1251 aaPredicted RBP15.25■□□□□ 0.03
CLCF1-202ENST00000533438 MMP10P09238 476 aa15.24■□□□□ 0.03
CLCF1-202ENST00000533438 GYS1P13807 737 aa15.24■□□□□ 0.03
CLCF1-202ENST00000533438 NLGN1Q8N2Q7 840 aa15.24■□□□□ 0.03
CLCF1-202ENST00000533438 GPBP1L1Q9HC44 474 aaPredicted RBP15.24■□□□□ 0.03
CLCF1-202ENST00000533438 N4BP2Q86UW6 1770 aaPredicted RBP15.24■□□□□ 0.03
CLCF1-202ENST00000533438 U2SURPO15042 1029 aaKnown RBP15.22■□□□□ 0.03
CLCF1-202ENST00000533438 RFC4P35249 363 aa15.22■□□□□ 0.03
CLCF1-202ENST00000533438 SLC39A6Q13433 755 aa15.22■□□□□ 0.03
CLCF1-202ENST00000533438 C10orf71Q711Q0 1435 aa15.22■□□□□ 0.03
CLCF1-202ENST00000533438 BRCA1P38398 1863 aaKnown RBP15.22■□□□□ 0.03
CLCF1-202ENST00000533438 INTS5Q6P9B9 1019 aaKnown RBP15.21■□□□□ 0.03
CLCF1-202ENST00000533438 DNAJC10Q8IXB1 793 aa15.21■□□□□ 0.03
CLCF1-202ENST00000533438 PXDNLA1KZ92 1463 aa15.2■□□□□ 0.02
CLCF1-202ENST00000533438 USP42Q9H9J4 1324 aaKnown RBP15.2■□□□□ 0.02
CLCF1-202ENST00000533438 KIF3CO14782 793 aa15.2■□□□□ 0.02
CLCF1-202ENST00000533438 PPP2R1AP30153 589 aa15.2■□□□□ 0.02
CLCF1-202ENST00000533438 GAS2L2Q8NHY3 880 aa15.2■□□□□ 0.02
CLCF1-202ENST00000533438 CYP19A1P11511 503 aaPredicted RBP15.19■□□□□ 0.02
CLCF1-202ENST00000533438 VSIG10Q8N0Z9 540 aa15.19■□□□□ 0.02
CLCF1-202ENST00000533438 IL17REQ8NFR9 667 aa15.19■□□□□ 0.02
CLCF1-202ENST00000533438 CFAP53Q96M91 514 aa15.19■□□□□ 0.02
CLCF1-202ENST00000533438 RSPH6AQ9H0K4 717 aa15.19■□□□□ 0.02
CLCF1-202ENST00000533438 CCDC87Q9NVE4 849 aa15.19■□□□□ 0.02
CLCF1-202ENST00000533438 GNAT3A8MTJ3 354 aa15.18■□□□□ 0.02
CLCF1-202ENST00000533438 TGFB2P61812 414 aa15.18■□□□□ 0.02
CLCF1-202ENST00000533438 SRP68Q9UHB9 627 aaKnown RBP15.18■□□□□ 0.02
CLCF1-202ENST00000533438 CEMIPQ8WUJ3 1361 aa15.18■□□□□ 0.02
CLCF1-202ENST00000533438 SOS1Q07889 1333 aaPredicted RBP15.17■□□□□ 0.02
CLCF1-202ENST00000533438 PHACTR3Q96KR7 559 aa15.17■□□□□ 0.02
CLCF1-202ENST00000533438 PARP3Q9Y6F1 533 aa15.17■□□□□ 0.02
CLCF1-202ENST00000533438 AFDNP55196 1824 aaKnown RBP15.16■□□□□ 0.02
CLCF1-202ENST00000533438 PRKAR2BP31323 418 aa15.16■□□□□ 0.02
CLCF1-202ENST00000533438 FKBP8Q14318 412 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms