RNA–Protein interactions for RNA: ENST00000533362.1

PUF60-222, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-222ENST00000533362 NUP188Q5SRE5 1749 aa29.62■■■□□ 2.33
PUF60-222ENST00000533362 NBPF14Q5TI25 921 aa29.61■■■□□ 2.33
PUF60-222ENST00000533362 CCDC146Q8IYE0 955 aa29.61■■■□□ 2.33
PUF60-222ENST00000533362 NFATC2IPQ8NCF5 419 aa29.61■■■□□ 2.33
PUF60-222ENST00000533362 CEMIPQ8WUJ3 1361 aa29.61■■■□□ 2.33
PUF60-222ENST00000533362 IL17REQ8NFR9 667 aa29.59■■■□□ 2.33
PUF60-222ENST00000533362 CCER2I3L3R5 266 aa29.58■■■□□ 2.33
PUF60-222ENST00000533362 CCNL1Q9UK58 526 aaPredicted RBP29.58■■■□□ 2.33
PUF60-222ENST00000533362 TMPOP42166 694 aaKnown RBP29.57■■■□□ 2.32
PUF60-222ENST00000533362 PROM2Q8N271 834 aa29.57■■■□□ 2.32
PUF60-222ENST00000533362 ATG3Q9NT62 314 aa29.57■■■□□ 2.32
PUF60-222ENST00000533362 ASAP1Q9ULH1 1129 aa29.57■■■□□ 2.32
PUF60-222ENST00000533362 DLG5Q8TDM6 1919 aa29.56■■■□□ 2.32
PUF60-222ENST00000533362 RIPK4P57078 832 aa29.56■■■□□ 2.32
PUF60-222ENST00000533362 MCM10Q7L590 875 aa29.54■■■□□ 2.32
PUF60-222ENST00000533362 LOC102724428A0A0B4J2F2 783 aa29.52■■■□□ 2.32
PUF60-222ENST00000533362 SIK1P57059 783 aa29.52■■■□□ 2.32
PUF60-222ENST00000533362 PAPPAQ13219 1627 aa29.52■■■□□ 2.32
PUF60-222ENST00000533362 SIPA1L3O60292 1781 aaPredicted RBP29.52■■■□□ 2.32
PUF60-222ENST00000533362 TTC5Q8N0Z6 440 aa29.51■■■□□ 2.31
PUF60-222ENST00000533362 STK32BQ9NY57 414 aa29.51■■■□□ 2.31
PUF60-222ENST00000533362 ZNF831Q5JPB2 1677 aa29.5■■■□□ 2.31
PUF60-222ENST00000533362 RBM42Q9BTD8 480 aaKnown RBP29.49■■■□□ 2.31
PUF60-222ENST00000533362 LRRC4BQ9NT99 713 aa29.49■■■□□ 2.31
PUF60-222ENST00000533362 DCTN1Q14203 1278 aa29.48■■■□□ 2.31
PUF60-222ENST00000533362 RRP7AQ9Y3A4 280 aaKnown RBP29.48■■■□□ 2.31
PUF60-222ENST00000533362 BTBD11A6QL63 1104 aa29.47■■■□□ 2.31
PUF60-222ENST00000533362 APAF1O14727 1248 aa29.47■■■□□ 2.31
PUF60-222ENST00000533362 NEUROD2Q15784 382 aa29.47■■■□□ 2.31
PUF60-222ENST00000533362 FAM9BQ8IZU0 186 aa29.47■■■□□ 2.31
PUF60-222ENST00000533362 C5P01031 1676 aa29.47■■■□□ 2.31
PUF60-222ENST00000533362 ATP6V1AP38606 617 aa29.46■■■□□ 2.31
PUF60-222ENST00000533362 TAF7Q15545 349 aaPredicted RBP29.46■■■□□ 2.31
PUF60-222ENST00000533362 PTCD1O75127 700 aaKnown RBP29.44■■■□□ 2.3
PUF60-222ENST00000533362 ZNF790Q6PG37 636 aa29.44■■■□□ 2.3
PUF60-222ENST00000533362 SLC39A6Q13433 755 aa29.43■■■□□ 2.3
PUF60-222ENST00000533362 SLC15A2Q16348 729 aa29.43■■■□□ 2.3
PUF60-222ENST00000533362 CICQ96RK0 1608 aaPredicted RBP29.42■■■□□ 2.3
PUF60-222ENST00000533362 UBR2Q8IWV8 1755 aa29.42■■■□□ 2.3
PUF60-222ENST00000533362 CALD1Q05682 793 aaKnown RBP29.42■■■□□ 2.3
PUF60-222ENST00000533362 NCBP3Q53F19 620 aaKnown RBP29.42■■■□□ 2.3
PUF60-222ENST00000533362 ANO8Q9HCE9 1232 aaPredicted RBP29.42■■■□□ 2.3
PUF60-222ENST00000533362 TAF1LQ8IZX4 1826 aa29.42■■■□□ 2.3
PUF60-222ENST00000533362 KCPQ6ZWJ8 1503 aa29.41■■■□□ 2.3
PUF60-222ENST00000533362 KCNQ4P56696 695 aa29.41■■■□□ 2.3
PUF60-222ENST00000533362 R3HDM1Q15032 1099 aaKnown RBP29.41■■■□□ 2.3
PUF60-222ENST00000533362 VSIG10Q8N0Z9 540 aa29.41■■■□□ 2.3
PUF60-222ENST00000533362 FMNL2Q96PY5 1086 aa29.4■■■□□ 2.3
PUF60-222ENST00000533362 BABAM1Q9NWV8 329 aa29.4■■■□□ 2.3
PUF60-222ENST00000533362 MIER1Q8N108 512 aa29.39■■■□□ 2.3
PUF60-222ENST00000533362 AKT1S1Q96B36 256 aa29.39■■■□□ 2.3
PUF60-222ENST00000533362 THUMPD2Q9BTF0 503 aaKnown RBP29.39■■■□□ 2.3
PUF60-222ENST00000533362 TRIM35Q9UPQ4 493 aa29.39■■■□□ 2.3
PUF60-222ENST00000533362 C4BP0C0L5 1744 aa29.39■■■□□ 2.3
PUF60-222ENST00000533362 NGEFQ8N5V2 710 aa29.38■■■□□ 2.29
PUF60-222ENST00000533362 AK7Q96M32 723 aa29.38■■■□□ 2.29
PUF60-222ENST00000533362 ITPK1Q13572 414 aa29.37■■■□□ 2.29
PUF60-222ENST00000533362 TFCP2L1Q9NZI6 479 aa29.37■■■□□ 2.29
PUF60-222ENST00000533362 PSDA5PKW4 1024 aaPredicted RBP29.36■■■□□ 2.29
PUF60-222ENST00000533362 ZNF827Q17R98 1081 aa29.36■■■□□ 2.29
PUF60-222ENST00000533362 CCDC27Q2M243 656 aa29.36■■■□□ 2.29
PUF60-222ENST00000533362 LINC00116Q8NCU8 138 aa29.36■■■□□ 2.29
PUF60-222ENST00000533362 SLC4A9Q96Q91 983 aa29.36■■■□□ 2.29
PUF60-222ENST00000533362 TEX13AQ9BXU3 409 aaPredicted RBP29.36■■■□□ 2.29
PUF60-222ENST00000533362 COL5A3P25940 1745 aaPredicted RBP29.35■■■□□ 2.29
PUF60-222ENST00000533362 HEG1Q9ULI3 1381 aa29.35■■■□□ 2.29
PUF60-222ENST00000533362 TJP1Q07157 1748 aa29.34■■■□□ 2.29
PUF60-222ENST00000533362 QSER1Q2KHR3 1735 aa29.34■■■□□ 2.29
PUF60-222ENST00000533362 ZNF496Q96IT1 587 aaPredicted RBP29.34■■■□□ 2.29
PUF60-222ENST00000533362 CNTNAP4Q9C0A0 1308 aa29.34■■■□□ 2.29
PUF60-222ENST00000533362 KDM3BQ7LBC6 1761 aa29.34■■■□□ 2.29
PUF60-222ENST00000533362 FLAD1Q8NFF5 587 aa29.33■■■□□ 2.29
PUF60-222ENST00000533362 TSPYL4Q9UJ04 414 aa29.33■■■□□ 2.29
PUF60-222ENST00000533362 RC3H1Q5TC82 1133 aaKnown RBP29.32■■■□□ 2.28
PUF60-222ENST00000533362 STARD3NLO95772 234 aa29.3■■■□□ 2.28
PUF60-222ENST00000533362 DNAJC10Q8IXB1 793 aa29.3■■■□□ 2.28
PUF60-222ENST00000533362 MIS18AQ9NYP9 233 aa29.29■■■□□ 2.28
PUF60-222ENST00000533362 GNPATO15228 680 aa29.28■■■□□ 2.28
PUF60-222ENST00000533362 KCNQ3O43525 872 aa29.28■■■□□ 2.28
PUF60-222ENST00000533362 SNRPA1P09661 255 aaKnown RBP29.28■■■□□ 2.28
PUF60-222ENST00000533362 CFAP44Q96MT7 982 aa29.28■■■□□ 2.28
PUF60-222ENST00000533362 SSFA2P28290 1259 aa29.27■■■□□ 2.28
PUF60-222ENST00000533362 CRKLP46109 303 aaKnown RBP29.27■■■□□ 2.28
PUF60-222ENST00000533362 GNAI1P63096 354 aa29.27■■■□□ 2.28
PUF60-222ENST00000533362 IFT57Q9NWB7 429 aa29.27■■■□□ 2.28
PUF60-222ENST00000533362 PNPLA7Q6ZV29 1317 aa29.26■■■□□ 2.27
PUF60-222ENST00000533362 CHL1O00533 1208 aa29.26■■■□□ 2.27
PUF60-222ENST00000533362 WWC1Q8IX03 1113 aa29.26■■■□□ 2.27
PUF60-222ENST00000533362 RTCBQ9Y3I0 505 aaKnown RBP29.26■■■□□ 2.27
PUF60-222ENST00000533362 LAS1LQ9Y4W2 734 aaKnown RBP29.26■■■□□ 2.27
PUF60-222ENST00000533362 TUBGCP6Q96RT7 1819 aa29.26■■■□□ 2.27
PUF60-222ENST00000533362 CYP19A1P11511 503 aaPredicted RBP29.25■■■□□ 2.27
PUF60-222ENST00000533362 EIF4A1P60842 406 aaKnown RBP29.25■■■□□ 2.27
PUF60-222ENST00000533362 CCDC87Q9NVE4 849 aa29.25■■■□□ 2.27
PUF60-222ENST00000533362 CASZ1Q86V15 1759 aa29.25■■■□□ 2.27
PUF60-222ENST00000533362 UBR3Q6ZT12 1888 aa29.25■■■□□ 2.27
PUF60-222ENST00000533362 ADRA2BP18089 450 aa29.24■■■□□ 2.27
PUF60-222ENST00000533362 IL16Q14005 1332 aa29.23■■■□□ 2.27
PUF60-222ENST00000533362 RPS6KA4O75676 772 aa29.23■■■□□ 2.27
PUF60-222ENST00000533362 SLC16A10Q8TF71 515 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms